Carassius gibelio (silver crucian carp): 127958584
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Entry
127958584 CDS
T08819
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04060
Cytokine-cytokine receptor interaction
cgib04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127958584
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127958584
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgib04052
]
127958584
Cytokines and neuropeptides [BR:
cgib04052
]
Cytokines
Transforming growth factors (RSTK binding)
127958584
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
127958584
NCBI-ProteinID:
XP_052413435
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All DBs
Position
B5:17708830..17713394
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AA seq
404 aa
AA seq
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METQPIILLAVLVVSLMHAGCGKIDNDGALTGEHREVFIGSYSDLSLQSYPRYPLYMMQL
YRDFSGTMATTPASVDNPTLHQSDFVLSMIAQDCHQTGERWSVTFDMSSLSARDSIQLSE
LRIRLPAFSASRRVIVDIFHLHTQDCEFCHHKRLFIGSIKSVPGSSASSWRVFNVTELLE
QWLNQRTEAPEQIPTPDAGEDTGSGEDLPEPFTRSWRTKIQHPTAERVMIVVFYKNKLSH
SGQQRASSLINTVARSKYVVLNRAADTAQARRHKRNRVERMRATDDRNATGVVSPREQHQ
GSLCRRVDMWVDFDQIGWDEWIVHPKRYNAYRCEGECPSPLDESFNPTNHAYMQSLLKLY
HPERVTCPSCVPTRLSSLSMLYYEGDGLVMRHHEDMIVEECGCH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagccaatcatattgctcgctgtcttggtggtttccttgatgcacgctgga
tgcggaaagatcgataatgacggcgcactcacgggagaacatcgtgaagttttcataggt
tcatattccgacttaagtctccagtcgtatccaagatacccgctttacatgatgcagtta
tacagagacttcagcggtacgatggcaactactccagccagtgtcgacaacccaactctt
catcagtctgacttcgtcctaagcatgattgcacaagactgtcatcaaactggtgagcga
tggtcggtcactttcgacatgtcttccctctcagcgagagacagcattcaactttcagag
ctccgcatccgtctgccagcgttttctgcgtccagacgcgttattgtggacatcttccac
ttacatacacaggattgtgagttttgtcaccataagcgactttttataggcagcatcaag
tcagtgcccggcagttcagcatcgtcctggagagttttcaatgtcacggagttactcgag
cagtggttgaatcagaggaccgaggcacctgaacagatcccgacacctgacgccggagag
gacaccgggagcggggaagacttacctgaaccttttacacgcagctggcgaacaaaaatc
cagcatcccacagcagaacgagttatgattgtagtgttctacaaaaacaaactttcccac
agtggccagcagcgtgcctccagcttgatcaatacagtggcccgctccaaatatgtcgtc
ctgaaccgggcagcagacacagctcaagctcgtcgccacaaaaggaaccgggtcgaaagg
atgcgcgctacggatgatagaaacgcgacgggagtagtatcgcctcgagagcaacatcaa
ggatcactttgtcgtcgagttgatatgtgggtggattttgatcagattggatgggatgaa
tggatcgtgcaccctaagcgttataatgcgtaccgctgcgaaggagaatgtccaagtccg
ttggatgagtctttcaatccaacaaaccatgcttatatgcagagtttgttgaagctttac
catccggagcgcgttacctgtccgtcatgtgtcccgacgcgcctcagctcactctccatg
ttgtactatgaaggcgatggtttggtcatgcggcaccacgaggacatgatcgtggaggag
tgcggatgtcattaa
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