Carassius gibelio (silver crucian carp): 127958637
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Entry
127958637 CDS
T08819
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04270
Vascular smooth muscle contraction
cgib04625
C-type lectin receptor signaling pathway
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127958637
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127958637
09153 Circulatory system
04270 Vascular smooth muscle contraction
127958637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127958637
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127958637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127958637
NCBI-ProteinID:
XP_052413506
LinkDB
All DBs
Position
B5:complement(21235067..21312929)
Genome browser
AA seq
1431 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPPSHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLAQIPLSDGEGEEGPLFSLTSPQSPGPIGPDRSSSSPSPSERKLTPL
SVWAMMEEHSRNPAPKLLKEIQDAKKHIPQHQEQLSRPSGTGQDGSLSPRLGEGEQEDGG
GDLDQPLSWQGDAGMEPPWTNNNTAPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSP
DAEDTPDLDSQSSVGSPSSRLVAQIIGAEDEDFDTEQEQMNGQCSCFQSVDLLKSRPAHL
AAFIHHVVSQFDPAPLLCYLYAEIYKQSSSKETRRILMDTFFVEKTASLKVTVPESIIVD
LERTAHSNNAERKKPEPISEDVHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAEL
ARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCSTMQFVILSYMKQLGVK
VKESRGLEHKPKLMNLFPKIKRSIKPEKDGSEKKTRFPNVFPPRRPSRIDTSAISRALEP
RQRPTKPPLPLGTGEQADGSSPPVRSSQSSEVSDGTTAQFTSPPYSAPAAQGTDGISREP
EAGGLPSSALPRLGDGVVPGDLQDSSSSNTHFDFSPCTLEHLQEEEAETDKTQDTGTPRA
DRRRMEPLCSGEVQSEDDQCAEVELEPLNWQTLVSRDVLSTLTPQEIKRQEVINELFYTE
KAHVRMMKVLENLFYQPLIRDSILPPADIKNIFSNLEEIVQLHMSLTEQMTAVRKKNETA
LIDSIGDDLLSWFSGEEEVKIKRAAGTYCSNQPFALELIKSKQKKDQRFSSFIQEAESNR
HCRRLQLKDIIPVETQRLTKYPLLLENIAKNTEDPEERRKVKQAGECCRKILTHVNQEVK
EAENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKVNKDKTIELY
TLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRSVATDNRSFFV
ISMSDNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHNIIPLPQTDVEREAVELINS
GVQKLNKESEPISLVSIQSPEKDGTEVMPTPACGTNPFETKSDEEEEEEEEEEENSLQDQ
GEDDEAFVVADMTDRLTFLKQRSRLGIAIDEDEAEAFELQPLRADEALRTLATLRQLLIN
HMSSQEDTDRDIERREQRDDVARTGSQQGTEDSTAIRSAVENGSERTENRAENAQDLPSG
DTGFFETSEECVSAGSYMVLEVYGESSTDDVQGSSGEPVAAGDSGIDLKKLLSSSSQSSG
GPNLNRQIMTHIRILQANLQHLKDTEIKYNQLRQKLSEEPATDTEEDKDKS
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggatcatcccccagacaaaaagcccaaaagcgacaaggcgtcagtg
cccccctcgcatgagtttgaccccacagggcttgtgcagcgttgtgttatcatccagaaa
gatgagaatggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgta
aaagaggatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtc
aatgggacattagttacacattcaaatcatgtagaagttgtaaagctaataaaatcgggc
tcctatgtggccctgacagttctggggagaccgccgggcctggctcagatccccctctca
gatggcgagggggaggaggggcctctcttctcactcacttcccctcagtccccggggccc
attggtccagaccgctcgtcttcctcccccagcccctcggagcgcaaactgacccctctg
tctgtatgggccatgatggaggagcacagcaggaaccctgctcctaaactactgaaggaa
atccaggacgccaagaagcacattccacagcaccaggagcagctcagcaggccctctggg
actggacaggatggctccttatctccaaggctaggagaaggagagcaggaggatggaggg
ggagatttggatcagcccctttcatggcagggcgatgctggaatggagccaccgtggacc
aacaataacacagcccctgtcactcccagtcctgtcccagagagtccatgccaaagagag
accccctgccacagcccaaagaccacaccccgagatagcctcaactcctgtccatcaccg
gacgctgaagacacacctgaccttgattctcagtcgagtgtggggagcccctcatctcgt
ctggtagcacaaatcattggtgctgaggacgaagactttgacacagagcaggaacagatg
aatggccagtgtagctgttttcagagcgtagacctccttaaatctcggcctgctcacctg
gcagctttcatccatcatgtggtctctcagtttgaccctgcaccactgctgtgctacctc
tatgctgaaatttacaaacagtccagctccaaagagacacgacgaatcctcatggatacc
ttcttcgtagaaaaaacagctagcttgaaagtaacagtacccgaatccattatcgttgac
ctggaacggactgcacactcaaataatgcagaacggaagaagccggagcctatctcagag
gatgtccaccggcaatatgtgcagcagctgcaggacacactactacctgacatccagaag
aacctagaagacttcaggcacaagcgcagtatgggtctgaccctggctgaagcagagcta
gcccgtctggatacagagagaatgagagaccgtgtggctctggaaaaagagcgatcctgt
gcagagcacattatctctaagatagaggatgtactattgacgtcacaggccacagaggaa
gataagtgtagcaccatgcagtttgtgatactgtcatatatgaagcagctcggcgtaaaa
gtgaaggagtctcgagggctggagcacaagcccaagctaatgaatcttttccctaagatc
aagagaagtataaagcctgagaaagatggaagtgagaagaaaactcgatttcctaatgtc
tttcctccgagacggccgagcaggattgacacttcagcaatcagcagggctctggagccg
aggcagcgtccgacaaagcctccgctgccgctgggcaccggagagcaggcagatggctcg
tctcctcctgtacggagcagtcagtcgagtgaagtctcagatggcaccactgcccagttc
acgtcacccccttacagcgctccagcagcacagggcacagacggcatcagccgagagcct
gaggctggaggactcccctcttctgcactacctagactgggggacggtgtcgtcccggga
gatctgcaggactcgtcctcctcaaacactcactttgacttcagcccctgtacactggag
catctacaggaggaggaagctgagacagacaagacgcaggacaccggcacccccagggct
gacaggagaaggatggagccgctgtgctctggagaggtgcagagtgaagatgatcagtgt
gctgaggtagagctggagcctctgaactggcagacgctggtgagcagagacgtcctgtcc
acactaacccctcaggaaatcaagagacaggaagtcatcaacgagttgttctacacagag
aaagcacacgttcgaatgatgaaggttctggagaatttgttttaccagccgctgatccga
gactccatcctccctcctgcagacatcaaaaacatcttcagcaacctcgaggagatcgta
cagctgcacatgtctttaacagaacaaatgactgcggttcggaagaaaaatgagacggcg
ctcattgactcaataggagatgatttgctttcctggttcagtggagaagaagaggtgaag
atcaagagagctgcgggcacgtactgcagtaatcagcctttcgccctggagctcatcaag
agcaaacagaagaaagaccagcgcttcagctccttcatacaggaggcagagagtaaccga
cattgtcgcaggttacagttaaaggacattattcctgtggagacgcaaagactcacaaag
tatcccctcctgctggagaacattgccaaaaacacagaggatcctgaggagagaaggaaa
gtgaaacaggctggcgaatgctgtcgaaagattctcactcacgtcaaccaggaggtgaag
gaagccgagaacaaacagaggttggaggactaccagagacgactggacctgtcctcactg
aagcagagcgagaaccccatgatctccgagtttaagaacctggatttgactaagaggaag
atggtgcatgagggaccgctgtcctggaaggtcaacaaagataaaactattgagctgtac
acattgctgctggaggatatattggtgctacttcaaaggcaagatgagaagctgatctta
aaatgccacagtaagaatctggcgggcactgctgaaaccaaacacatcttcagccccatc
atcaaactcagcactgtgatggtgcgctcggtcgccactgacaacaggtcattctttgtc
atctctatgtctgataatggagcgcagatctatgaactaatggctcaaaccgtttctgag
caaaagacgtggcagtgtctgatcacacaacgagccgattgtatgaagaccaaactacac
aacatcattccattacctcagactgacgtggaacgagaagcggtcgagttgataaactct
ggtgttcagaaactaaacaaagagtctgagcccatttctttagtgagcattcagtctcca
gaaaaagatggcaccgaggtcatgccaaccccagcatgtggcaccaacccattcgagacc
aaatctgatgaggaggaggaggaagaagaagaagaagaagaaaactcactacaggatcag
ggtgaagatgatgaagcgttcgtggtggccgatatgaccgatcgccttacattcctgaag
cagcgctcgaggctgggcatcgccatagacgaggacgaggccgaggccttcgagctccag
cctctcagagctgatgaagctctcagaacactggcaacactaaggcagctcctgatcaac
cacatgtccagtcaggaggacacagacagagacatcgagaggcgagagcaacgggacgat
gtggcgaggacaggctctcagcaggggacggaggacagcactgcgatcaggtccgctgtt
gagaacggctcagagaggaccgagaacagagcggagaacgcacaggatctgccctctgga
gacaccggcttctttgagacgtctgaggagtgtgtctctgcaggcagttatatggtgctg
gaggtgtatggcgagagcagcacagatgatgtgcagggcagcagcggggagccggtggca
gcgggagactcgggcattgacttgaagaagctcctctcttcctcctctcagagcagcgga
ggaccaaacctcaacagacagatcatgacacacatacggatactacaggccaacctgcaa
catctgaaggatacagaaatcaagtataaccagctacgccaaaagctatcagaggaaccc
gctactgacacagaggaagacaaagataaaagttag
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integrated database retrieval system
