Carassius gibelio (silver crucian carp): 127959008
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Entry
127959008 CDS
T08819
Name
(RefSeq) transcription factor HES-1-like
KO
K06054
hairy and enhancer of split 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03460
Fanconi anemia pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127959008
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127959008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127959008
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127959008
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
127959008
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
127959008
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GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
127959008
NCBI-ProteinID:
XP_052413972
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Position
B6:10865292..10867137
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AA seq
270 aa
AA seq
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MPADIMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRVQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPAGPPHPSFSQPMVQIPSA
NQQANVVPLSGVPCKSGSSSNLTSDATKVYGGFQLVPATDGQFAFLIPNAAFAPNGPVIP
VYANNSSTPVPVAVSPGAPSVTSDSVWRPW
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatcatggaaaaaaactcatcttctccggttgccgcgactccggcgagc
atgaacactacacctgacaaacccaaaacggcttctgagcacagaaagtcttctaaacct
attatggagaaaagaagaagagcgcgaatcaacgaaagcttgggtcagctgaaaacgcta
atcttggatgctctgaaaaaagatagctccagacattctaaacttgagaaagcggacatc
ctggagatgaccgtgaaacatcttagaaatatgcagcgggtgcaaatgaccgctgccctg
aacacggatcccaccgttcttgggaaatacagagctggattcagtgaatgcatgaacgag
gtgacccggttcctgtccacctgtgaaggggttaacaccgaggtcaggacccggctgctg
ggtcacttagccagctgcatgacacagatcaacgccatgaattatccaacacagcaccag
atacctgccgggcctcctcatccatccttcagtcagccaatggttcagatccccagcgcg
aatcagcaagccaacgttgtgcctcttagcggagtcccctgcaaaagcggatcttcctcc
aacttgacttctgacgcaacaaaagtatacggaggcttccagctcgtgccggcaacagac
ggacagttcgcctttttgattcctaacgctgcctttgctccaaacggtcccgttattcca
gtgtatgccaacaattccagcacaccggttccggtggccgtgtctccgggagcaccgtcc
gtcacatcagattccgtttggcggccttggtaa
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