Carassius gibelio (silver crucian carp): 127959029
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Entry
127959029 CDS
T08819
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127959029
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127959029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_1
LRR_EndoS
ig
Ig_2
V-set
fn3
LRR_Zer-1
Pur_ac_phosph_N
Ig_C17orf99
Sp38
LRRNT
LRRCT
LSR
Ig_6
Ig_5
Fn3_ELFN
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
127959029
NCBI-ProteinID:
XP_052413991
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All DBs
Position
B6:7853312..7863794
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AA seq
717 aa
AA seq
DB search
MARGTFFFVVQGQICFFLFLASLGLSSVQSTECPQLCVCEIRPWFTPQSTYREATTVDCN
DLHLTRIPGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGLTNMS
QLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNKL
KAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGLD
NLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQDGDFKNMLRLKELGINNMGE
LVSIERFALDNLPELTKLEATNNPKFSYVSRLAFRDLPSLESLMLNNNALNSLYQATAES
LPNLREISIHSNPLRCDCVIQWMSSNKTTIRFMEPLSMFCAMPLEVRGQRVRDVLSREST
GQCLPMISHDTFPNHLNLDIGMTVELDCRAMAEPEPEIYWVTPSGNKVMMDTISDKYQLS
SAGTLRISHIQVDDSGHYTCVAQNTEGADTRVTAIRVNGTLLDSTQLMKIYVKHTESHSI
LVSWKVNSNVMSSNLKWSSATMKIDNPHITYTAKVPVDVHEYNLTHLQPATEYEVCLSVS
NIHQQTQKSCVNVTTKHATFAVEISEQGTNTALAAVMGTILAIISLGSITLYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKDKDCSSETKPTQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagggactttcttttttgttgtgcagggccagatttgtttcttcctgtttctg
gcttcacttggcctctcttcagttcagagtacagaatgtccgcagctttgtgtgtgtgag
atccggccttggttcacaccccagtccacctacagagaagcaactactgttgattgcaat
gaccttcaccttacacgcatccctgggaacctgtccgctgacacacaggtgttgcttctg
caaagtaactacattgccagaactagtgaggagctggaacagttactgaatctcacagaa
ctcgacctgtcccagaacaacttcagcaacatccgggatatcggcctgaccaacatgtct
cagctcacaacgcttcacctagaagaaaaccaaatagtcgagatgcctgacttcagcttg
caagacctaaccaatctacaggagctgtacattaatcacaatcagatcagctccattgca
cccaatgccttcgccggattgcgtaaccttctgagactccatctgaactccaacaaactc
aaggccattgacagtcgctggtttgaatcaacccccaacctggagatcctgatgattggg
gaaaatcctgtggtcggcatcctggatttgaacttcaaacctctaaccaacttaagaagc
ctggtcctggcaggaatggagctcactgatatcccaggcaatgcatttgttggactagac
aacctggagagtctctccttctatgataacaaactagtccgggtgccacagactgctctg
cagaagcttccaaatctgaaatttctggatttgaacaagaatccaatacataaaattcaa
gatggcgactttaagaacatgctaagactaaaagaacttggcattaacaacatgggagaa
cttgtgtccattgaacgctttgccctggataacctcccagagttgaccaaactcgaagcc
accaacaaccccaagttttcatacgtgagccgtttagcattccgtgacttgccatcacta
gagagtctaatgctcaataacaatgctctaaactctctctaccaagcaacggcggagtcc
ctgcccaacctgagggagatcagtatccacagcaacccgctgcgctgcgactgtgtaatt
caatggatgagttcaaacaagacaaccattcgatttatggagcctctttcgatgttctgc
gccatgccacttgaggttagaggtcagcgtgtgagagacgtactttctcgtgaatctaca
ggccagtgcctgccaatgatctctcacgacacattccccaatcacctcaacctagacatc
gggatgacggtagaacttgactgtcgtgctatggctgaacctgaaccggaaatatactgg
gtgaccccatctggtaacaaagtcatgatggataccatatccgataaataccaactcagc
agtgcaggaactctgcgcatatcccacattcaggtggatgactctggccactatacctgt
gtggcccagaatacagaaggagcggacactcgggtgaccgcaattcgagtcaacgggact
cttctggatagcacccagcttatgaagatctatgtgaagcacacagagtcacactcaatt
ttagtatcctggaaagtgaactccaacgttatgtcgtccaatctgaagtggtcatcagcc
accatgaaaatcgacaaccctcacatcacctatacagctaaagttcctgtggatgttcat
gagtataacctcacgcaccttcagccggccactgagtatgaggtctgtctctcagtctcc
aatatccaccagcagacccagaagtcatgtgtcaatgtgacgaccaagcacgctacgttt
gcagtggagatctctgagcaaggcaccaatacggcactggcggcagtcatgggcacaata
ctggccatcatcagcctgggctcaatcacgctttacattgcaaagagatggaagaggaag
aactaccaccactccttaaagaagtacatgcagaaaacttcctctatccccctaaacgaa
ctctaccctcctctcattaacttatgggaggcagacagcgagaaggacaaggactgttct
tcagaaactaagccaacgcaggtggacacaacaagaagttactacatgtggtga
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