KEGG   Carassius gibelio (silver crucian carp): 127959388
Entry
127959388         CDS       T08819                                 
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127959388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127959388
Spliceosome [BR:cgib03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    127959388
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    127959388
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 127959388
NCBI-ProteinID: XP_052414511
LinkDB
Position
B6:11620737..11623683
AA seq 313 aa
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAIYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERVQTAEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERDRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq 942 nt   +upstreamnt  +downstreamnt
atggctaatagaacggtaaaagatgccaatagtatacatggaacaaatcctcagtatctt
gtcgagaagatcatacgaacacgtatttatgagtccaagtactggaaagaagaatgtttt
ggacttacagctgaacttgtcgtggacaaagcaatggaactgaagtatgttggtggtgta
tatggaggaaacatcaagcctactccattcttatgtctgaccctaaagatgctgcagatc
cagcctgaaaaggacattattgtggaattcatcaagaatgaagacttcaagtatgtccgt
ttgcttggagcaatatatatgcgcctgactggaacttctgtagattgctacaagtattta
gaaccattatacaatgactacagaaaaattaaaagccagaacagaaatggagagtttgag
ttgatgcatgttgatgagtttatagatgagctgcttcatgcagagcgaatgtgtgacatc
atcctccctagacttcagaagagacaggttttggaggaagctgagctgctggatactcgt
attagtgctctggaagaagatttggatgaggtggaaaccagtgatgaagaggatgaggaa
gaagagaagccagagagagtgcagacagcagagccccacagaagaagttatagagatatg
gaccggccacgcaggtctccttctccacgctacagacgcagccgctcacccagaagacgg
agcaggtcacctaaaagacgaagtccatctcccagacgtgagcgagatcgggagcgtcat
cgcagcaaaagtccccgcaggcaccgcagcagatccagggacaggagacatcgctccaaa
tctccaggccaccacagaagtcaccggcatcgcagtcactccaagtccccagaaagtcgg
tcaaagaagagtcacaagagaagtcggagaggaaatgagtga

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