Carassius gibelio (silver crucian carp): 127959388
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Entry
127959388 CDS
T08819
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127959388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127959388
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127959388
Complex C
U4/U6.U5 tri-SnRNP related factors
127959388
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
127959388
NCBI-ProteinID:
XP_052414511
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All DBs
Position
B6:11620737..11623683
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AA seq
313 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAIYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERVQTAEPHRRSYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERDRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaatagaacggtaaaagatgccaatagtatacatggaacaaatcctcagtatctt
gtcgagaagatcatacgaacacgtatttatgagtccaagtactggaaagaagaatgtttt
ggacttacagctgaacttgtcgtggacaaagcaatggaactgaagtatgttggtggtgta
tatggaggaaacatcaagcctactccattcttatgtctgaccctaaagatgctgcagatc
cagcctgaaaaggacattattgtggaattcatcaagaatgaagacttcaagtatgtccgt
ttgcttggagcaatatatatgcgcctgactggaacttctgtagattgctacaagtattta
gaaccattatacaatgactacagaaaaattaaaagccagaacagaaatggagagtttgag
ttgatgcatgttgatgagtttatagatgagctgcttcatgcagagcgaatgtgtgacatc
atcctccctagacttcagaagagacaggttttggaggaagctgagctgctggatactcgt
attagtgctctggaagaagatttggatgaggtggaaaccagtgatgaagaggatgaggaa
gaagagaagccagagagagtgcagacagcagagccccacagaagaagttatagagatatg
gaccggccacgcaggtctccttctccacgctacagacgcagccgctcacccagaagacgg
agcaggtcacctaaaagacgaagtccatctcccagacgtgagcgagatcgggagcgtcat
cgcagcaaaagtccccgcaggcaccgcagcagatccagggacaggagacatcgctccaaa
tctccaggccaccacagaagtcaccggcatcgcagtcactccaagtccccagaaagtcgg
tcaaagaagagtcacaagagaagtcggagaggaaatgagtga
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