KEGG   Carassius gibelio (silver crucian carp): 127959887
Entry
127959887         CDS       T08819                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03010  Ribosome
cgib04120  Ubiquitin mediated proteolysis
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    127959887
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127959887
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127959887
   04137 Mitophagy - animal
    127959887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cgib03011]
    127959887
   04121 Ubiquitin system [BR:cgib04121]
    127959887
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127959887
Ribosome [BR:cgib03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    127959887
  Archaea
    127959887
Ubiquitin system [BR:cgib04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   127959887
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127959887
  Exosomal proteins of colorectal cancer cells
   127959887
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 127959887
NCBI-ProteinID: XP_052415260
LinkDB
Position
B6:complement(25645067..25646892)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtgaaaaccctaacggggaaaaccatcaccctcgaggttgagccctct
gatactattgaaaatgtcaaggctaagattcaagacaaggaagggatccctcctgatcag
cagaggttgatctttgctggcaaacagctggaggatggacgcaccctgtctgactacaac
attcagaaggagtccacactgcatcttgtgctgagactgcgtggtggtgctaagaagagg
aagaagaagtcctacaccacccccaagaagaacaagcacaagagaaagaaggtcaagctc
gcggtgctcaaatattacaaggttgatgagaacggcaagatccaccgcctgcgccgtgag
tgtccagcagatgagtgtggagccggggtgtttatggctagccactttgaccgtcattac
tgcgggaagtgctgcctgacttactgcttcaacaaaccagaggacaagtga

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