Carassius gibelio (silver crucian carp): 127959976
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Entry
127959976 CDS
T08819
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127959976
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127959976
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
LRR_LRWD1
LRR_6
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
127959976
NCBI-ProteinID:
XP_052415447
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Position
B6:1746684..1751137
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AA seq
953 aa
AA seq
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MSSAFFFVLNCCVLTTLTDGFSLSNCTIYFPFEYSGHLKVLCNRMGYWKTPSPLPHNTVN
LDISYNAIQRIAEWDFIRLSNLIILNISHNRIHEIHANALSDLTNLEELNLSNNKITTVT
TNLLNGLSNLTHLRLDSNYIETIENQSLATLSNLRLVNFTDNKLMHISELHPLLRVPHLE
ELYLGENGFLVFNSSDIPSAFFGLKKLDLSRNPLTVFKMTENIFPDLEELDLSSCFQTNT
SNWFILDKAFLNTVKTLNLSMNHFEENQLGYIMQSFASVNWMALDNLKGFKVETVLEKAC
SPSLRSLHLEGNQLSVLNDRMFRPCALLNALHLRNNGVSRIYKSSFDHLVNLTELRIQKN
NLMQLNNTLQVLPNLRVLDLHLNSIQNLDCSDFANLTQLRQLYLHKNQIVTIKACVFKDL
GNLEELILSSNRMLTVSGTFKYGPQNLQYLDLNNNKLSAIRRNSFKALDSLRTLHLSDSQ
ILNIYPYAFAGLINLTDLHLASNKITERTLEKHYVFAGMPNLQSVDLGCNYISYNTQEEL
QIPPFMHLSELRVLKINSQRRGLNYIPSNFLKGLKNLQVFYAGNLNVKNLHVDTFSCTPK
LALLDLTSNNLANRNALPSRLFQPISGLNKITLGRTHLKSLDFLVGANLSNLTILRASTN
DLEFINQTIIQSLPQLKVLDLQNNSFTCDCSNAWFIDWAVKNNKTQVLYLNRYECRYPLS
LSGKSLAAFNTESCNVNYDFICFIYSSSIVILTLVISFIYHFLKWQLVYAYYLFLAFIND
KKRKQTLNQLDFQYDAFISYNAQEEPWVLEELVPKLEGQHGLRLCLHHRDFQPGKAIIDN
IVDAIYNSRKTVCLITHNYLKSVWCSHEIQVASFRLFDEQKDVLVLVFLEDIPMHQLSPY
YRMRKLVKKQTYLRRPKPGEDTRAFWQKLKMAIESKEDMKDRQILSGKDEDDI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcgtttttcttcgttttgaactgttgcgttctcacaaccctgaccgatggc
ttttctttaagtaactgcaccatttatttcccctttgaatactctggccatctgaaggtg
ctgtgcaacagaatgggttactggaaaacaccttcaccgttgccccacaacactgtcaat
ctggatatttcctacaatgccatccaacggatcgctgaatgggatttcatcagactttca
aatctgatcattttaaacatatctcacaacaggatacatgaaatacacgccaatgcattg
agtgacctaacaaacctggaggagctcaacctgtccaacaacaaaatcacaacggtgaca
acaaacctgctcaacggtctctcaaatctgactcatttaagactcgactcgaattacata
gagacgattgaaaaccagtcacttgcgacactttcgaatttgaggctcgtaaactttacc
gataacaagttaatgcacatttccgaactccatcctcttcttcgagtaccacatctggag
gaactttacttgggagagaacggcttcctagtttttaactccagcgacatcccgtcagca
ttctttggtttgaaaaagttggatctgtcgaggaatcccttgacagtgttcaagatgacg
gaaaacatctttcctgatcttgaggaattggacttgtcaagctgtttccagaccaatact
tccaattggtttattctagacaaggcgttcctgaacacagttaagactctcaacctcagt
atgaaccactttgaagaaaaccagcttggttatataatgcagagtttcgcttctgtgaac
tggatggcactggataatctgaaggggttcaaggtagagacggttttagagaaagcatgt
tctcccagtctgaggagtctccacttggagggcaaccaactttctgtacttaacgatcgc
atgtttagaccgtgtgcacttttgaatgcactgcacctaagaaacaacggagtatcgaga
atttataagtcgtcattcgatcatcttgtcaacttgacagagttacgaatacaaaagaac
aatctgatgcaactgaacaacactcttcaggttctccccaacttacgagtcctcgatctt
catctcaacagcattcaaaatcttgactgctctgattttgccaatctgacgcagttaagg
caactctatttgcacaagaaccaaattgtgacaatcaaggcatgcgtatttaaggattta
ggaaatctcgaagagctcattttgagcagcaatcgtatgctaacggtcagtggtaccttt
aaatatggcccccaaaacttacaatacctggacttgaataacaataagttgagtgccatc
cgaagaaactcttttaaagctttggattcccttcggactttgcatctctccgatagccaa
atattaaatatctatccatatgcttttgcaggactgataaatttaacagacttgcatctt
gcatctaacaaaatcacagaaagaactctagaaaaacattatgtgttcgccggtatgcct
aacttgcagagtgtagatctgggttgcaattacatctcatataatactcaagaggagcta
caaattccaccgttcatgcatttaagtgaactgagagttttgaagattaacagtcaacgt
cgaggcttaaactacatcccttcgaacttcctgaaaggtctcaaaaacttgcaagtcttt
tatgctgggaaccttaatgtcaagaatttacatgtggacacatttagttgcactcccaag
cttgcgctcttggatttgacaagtaataatcttgcgaacaggaatgccttgccatccagg
cttttccagccaatatccggcctgaataagattacgttgggtcggactcacctcaagtcc
ttggacttcttagtcggcgcaaatctctccaatctgacgatcctgcgagccagtacgaat
gaccttgaatttataaaccaaaccatcatccaatcgcttcctcaactcaaagtgctcgac
ttgcaaaacaacagcttcacgtgcgactgtagtaatgcttggttcatcgactgggccgtc
aagaacaataaaacgcaagtcctctacctgaacaggtacgaatgtcgctatcccctttct
ttaagtggaaagagtctagcggccttcaacactgaatcctgcaatgtgaattacgacttc
atctgctttatctacagctcttccattgtcattctcactctagtcatttcatttatctac
cactttctaaagtggcaactggtctatgcatactacctctttttagccttcatcaatgac
aaaaagagaaagcaaaccttaaatcaactggatttccaatatgacgccttcatttcgtac
aatgctcaagaagagccatgggttctggaagaacttgtgcccaaacttgagggtcaacac
ggattgagattgtgccttcatcatcgagacttccagccaggaaaggccattattgacaac
attgtggacgcaatatacaacagccgcaaaaccgtttgcctgatcacgcacaactaccta
aagagcgtttggtgttcgcatgagatccaggtggccagcttcagactttttgatgagcag
aaagacgttttggttctagtttttctcgaggatattccaatgcaccagctttcgccgtat
taccgaatgcgcaagctggtgaagaagcagacgtatctacgacgtcccaaacctggagaa
gacactcgagcgttctggcagaaactcaaaatggccattgagtctaaagaggacatgaag
gacagacagatcctttctggaaaagacgaagatgatatttaa
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