Carassius gibelio (silver crucian carp): 127960039
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Entry
127960039 CDS
T08819
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04110
Cell cycle
cgib04218
Cellular senescence
cgib04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127960039
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127960039
04218 Cellular senescence
127960039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127960039
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
127960039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
127960039
NCBI-ProteinID:
XP_052415538
LinkDB
All DBs
Position
B6:4238630..4250080
Genome browser
AA seq
1050 aa
AA seq
DB search
MRGDETDSESVKSADGSIRSNLEALCQELNMDEETAAEALENFSSIWNTYTLEGDVVHWL
ACSLYAACRKSSIPTVGRGVMEGNGVSLTRILRSAKLSLIQFFSKMKKWSDMSNLSQDFR
SRIGRLERNFEVSTVIFRKFEPIFLDMFQNPQVEPPRMPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFCNALMCSNKKDLINQYFRGLPKDTENLEE
IPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKRILKGDAETLTELLDTPNFQDNN
KSINREYEEYVLTVGDFDERVFLGADADEEIGTPRKATAEPPSGQLSARMHVENHLQQHF
EKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALVQIFNSC
SRNPTESILNRVKTMGERFKQAYTKPTDDLPGAHMDFAENRLKLAEILYFKILENIMTQE
MKRLQGKDMAVLLEQEVLHCSLLACCLEVVLFAYSSQRTFPWILEIFQIPPFYFYKVIEV
FIRSEEGLSRDMVKHLNSIEEQVLESKAWTRDSALWTALNNANNKVPTVEEVNFPSNFDT
GNNSGGPTHLPLVALSPIVHPRIREVRTGLGSSARKDVPQSPIYLHDRYSSPAAGSAKRR
LFGDDPPPQSPVKRISVTPIKIIPSSTENNQNTSTTTVLSMATGNGQQLTIPLPVVKNQT
GGITVIQLQANDMHPLTAQFLLTTSPSRTAAPPASSDTQPPAVNKPRRTGSLALFFRKVY
HLASVRLRDLCLKLDISSELRGKIWTCFEHSLLHCTDLMKDRHLDQLLLCAVYIISKITK
QEHTFQDIMKCYRTQPQANSHVYRSVLLKRRPREQQTDENMEVDPPAEQSNERTEQANTT
EADSESEERGDLIQFYNSVYVLKMKSFALKYAHSTLDNKMEAPPLSPFPSVRSQPLSPRR
ISQRHSIFVSPHKNSSSLTPSNAYTYKFTGSPSKELSDINQMIRQGGVSKKRAFTMEGDE
TESPSKCLRQENDDVLLKRLQDVVSERASL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggagatgaaacggattcggagtccgttaaatcagccgatggttcgattcggagc
aatctcgaggcgctttgtcaagagctcaatatggacgaagagacggcagcagaagcgctt
gagaacttcagctcgatctggaacacgtacacgctagagggtgatgtcgttcactggctg
gcctgctctctgtatgctgcctgtaggaagagctcaatccccactgtgggacggggtgtg
atggagggcaacggcgtttcccttacaaggatcctgcgctcggcgaagctcagtttgatt
cagttcttcagcaagatgaagaaatggtcagacatgtcgaacctctctcaggatttccgc
agccgcataggtcgactagaacgcaatttcgaagtgtcgactgtgatttttcggaaattt
gagccaatatttctggacatgtttcagaatcctcaggttgaacctccccggatgcctaga
agccgcaaacaccggcgtcttccatgccacgtcagtgacgtcttcaagttctgttggact
ctgtttgtgtatacaaaaggcaatttccgtatgataggagatgacctggtcaactcgtat
cacctcctgctctgctgtctggacctggtgttttgcaacgccctcatgtgctccaacaag
aaagatctcatcaatcaatacttcagaggactgccgaaggatacagaaaacttggaggaa
ataccctgtgtcattgacaagttgtgtgagctgcatgatgggttggtggtggaggccaaa
ggcataaaggagcactacttcaaaccctacataaagacactgtttgagaaaagaatatta
aaaggtgatgctgagactctgactgagttgctggataccccaaatttccaagacaacaat
aaatccataaatcgtgagtatgaggaatatgttttgactgtgggggatttcgacgagcgg
gtgtttctgggagctgacgcagacgaggagatcggcacacctcgcaaggccaccgccgag
cctccatcaggtcaactatccgcccgcatgcacgtggagaaccaccttcagcagcacttt
gagaagacgcgttcccttgctccgtctacgcctctaacgggtcgacggtatctgaaggag
aaagaggtgctggtcacccccgtttcctcagctacccaaagtgtgagtcgactgcagagc
atggtgtccggcctccgaaacgctccgagcgatgctctggttcaaatctttaattcctgc
tctcgaaatcccactgagtccattctgaaccgagtgaagaccatgggagagaggtttaaa
caggcctacaccaaacccacagatgacctgccaggagcacatatggattttgcagagaat
cgtctgaagctggcggagatcttgtactttaagatcctggagaacatcatgactcaagag
atgaagagattacaagggaaagacatggcggtcctgttggagcaggaggtgctccattgc
tctctgttggcgtgctgtctggaggtggtgctgttcgcatacagctctcaaagaacattc
ccctggatactagaaatctttcagatcccaccattctacttttacaaggtgatcgaggtg
ttcatccggtccgaggagggtttgtcccgagacatggtgaagcatttgaacagtatagag
gagcaggtgctggaaagcaaagcctggaccagagactcggccctgtggacggcactcaat
aacgctaataataaagtccccactgtagaagaggtgaattttcccagtaattttgacacg
ggcaacaattcaggcggtcccactcacctcccattggtggcgctatctcccatcgtccac
cctcgcatcagggaggtccgcacaggcctgggctccagcgcacgcaaagacgtccctcag
tctcccatctatctccacgaccgctacagctcacctgcagccggcagcgctaagagacgc
ttgtttggtgacgatcctcctccacagtccccagtgaaaagaatctcagtcactcccatc
aaaatcattcccagcagcacagaaaacaaccagaacaccagcacaacgaccgtcctctcc
atggccacaggaaacggccagcagctcaccattccactgccagtggtaaagaaccagacg
ggtggcatcacagtcatccaacttcaggccaatgatatgcaccccctcaccgctcagttc
ttactgaccacctcccccagccgaacagcagctccacccgccagctccgacacacagcca
ccggccgtcaacaaaccccggcgcactggatccctcgccctcttcttcaggaaggtgtat
catttagcaagtgtgcgtctgcgagacctgtgtctgaagctggacatctcatcggagctg
cgagggaagatctggacgtgttttgagcactcgctgctgcactgcactgacctgatgaag
gaccggcacctggaccagctgctgctctgtgctgtctacattatatcaaagattacaaaa
caagagcacacttttcaggacattatgaaatgctaccgaacccaacctcaagccaacagt
cacgtgtaccgcagtgttttactgaagaggaggcccagagaacagcagacagatgagaac
atggaagtggatccgccggcagaacagtccaatgagaggacggaacaggcaaacacaaca
gaggctgacagcgaatcagaggaaagaggagacctcatccagttctacaactctgtttat
gtgctaaagatgaaatcgttcgctctcaaatatgcacattccacacttgataataagatg
gaggctcctccgttatctccgttcccgtcggttcgttcccagcccctctctcctcgccgt
atatctcagagacactccatctttgtctctcctcataaaaacagctcaagtctcacaccc
agtaatgcttacacgtacaagttcactggcagcccatcaaaggagctgagtgacataaac
cagatgatccgtcagggtggggtgagcaagaagcgggcgttcaccatggaaggtgatgag
accgagtctccatctaaatgcctgcggcaagagaacgacgacgtgcttctcaaacgcctg
caggatgtggtcagcgagagagcgagtctctaa
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