KEGG   Carassius gibelio (silver crucian carp): 127960039
Entry
127960039         CDS       T08819                                 
Name
(RefSeq) retinoblastoma-like protein 1
  KO
K04681  retinoblastoma-like protein 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04110  Cell cycle
cgib04218  Cellular senescence
cgib04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    127960039
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127960039
   04218 Cellular senescence
    127960039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgib03000]
    127960039
Transcription factors [BR:cgib03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    127960039
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB
Other DBs
NCBI-GeneID: 127960039
NCBI-ProteinID: XP_052415538
LinkDB
Position
B6:4238630..4250080
AA seq 1050 aa
MRGDETDSESVKSADGSIRSNLEALCQELNMDEETAAEALENFSSIWNTYTLEGDVVHWL
ACSLYAACRKSSIPTVGRGVMEGNGVSLTRILRSAKLSLIQFFSKMKKWSDMSNLSQDFR
SRIGRLERNFEVSTVIFRKFEPIFLDMFQNPQVEPPRMPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFCNALMCSNKKDLINQYFRGLPKDTENLEE
IPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKRILKGDAETLTELLDTPNFQDNN
KSINREYEEYVLTVGDFDERVFLGADADEEIGTPRKATAEPPSGQLSARMHVENHLQQHF
EKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALVQIFNSC
SRNPTESILNRVKTMGERFKQAYTKPTDDLPGAHMDFAENRLKLAEILYFKILENIMTQE
MKRLQGKDMAVLLEQEVLHCSLLACCLEVVLFAYSSQRTFPWILEIFQIPPFYFYKVIEV
FIRSEEGLSRDMVKHLNSIEEQVLESKAWTRDSALWTALNNANNKVPTVEEVNFPSNFDT
GNNSGGPTHLPLVALSPIVHPRIREVRTGLGSSARKDVPQSPIYLHDRYSSPAAGSAKRR
LFGDDPPPQSPVKRISVTPIKIIPSSTENNQNTSTTTVLSMATGNGQQLTIPLPVVKNQT
GGITVIQLQANDMHPLTAQFLLTTSPSRTAAPPASSDTQPPAVNKPRRTGSLALFFRKVY
HLASVRLRDLCLKLDISSELRGKIWTCFEHSLLHCTDLMKDRHLDQLLLCAVYIISKITK
QEHTFQDIMKCYRTQPQANSHVYRSVLLKRRPREQQTDENMEVDPPAEQSNERTEQANTT
EADSESEERGDLIQFYNSVYVLKMKSFALKYAHSTLDNKMEAPPLSPFPSVRSQPLSPRR
ISQRHSIFVSPHKNSSSLTPSNAYTYKFTGSPSKELSDINQMIRQGGVSKKRAFTMEGDE
TESPSKCLRQENDDVLLKRLQDVVSERASL
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgcgtggagatgaaacggattcggagtccgttaaatcagccgatggttcgattcggagc
aatctcgaggcgctttgtcaagagctcaatatggacgaagagacggcagcagaagcgctt
gagaacttcagctcgatctggaacacgtacacgctagagggtgatgtcgttcactggctg
gcctgctctctgtatgctgcctgtaggaagagctcaatccccactgtgggacggggtgtg
atggagggcaacggcgtttcccttacaaggatcctgcgctcggcgaagctcagtttgatt
cagttcttcagcaagatgaagaaatggtcagacatgtcgaacctctctcaggatttccgc
agccgcataggtcgactagaacgcaatttcgaagtgtcgactgtgatttttcggaaattt
gagccaatatttctggacatgtttcagaatcctcaggttgaacctccccggatgcctaga
agccgcaaacaccggcgtcttccatgccacgtcagtgacgtcttcaagttctgttggact
ctgtttgtgtatacaaaaggcaatttccgtatgataggagatgacctggtcaactcgtat
cacctcctgctctgctgtctggacctggtgttttgcaacgccctcatgtgctccaacaag
aaagatctcatcaatcaatacttcagaggactgccgaaggatacagaaaacttggaggaa
ataccctgtgtcattgacaagttgtgtgagctgcatgatgggttggtggtggaggccaaa
ggcataaaggagcactacttcaaaccctacataaagacactgtttgagaaaagaatatta
aaaggtgatgctgagactctgactgagttgctggataccccaaatttccaagacaacaat
aaatccataaatcgtgagtatgaggaatatgttttgactgtgggggatttcgacgagcgg
gtgtttctgggagctgacgcagacgaggagatcggcacacctcgcaaggccaccgccgag
cctccatcaggtcaactatccgcccgcatgcacgtggagaaccaccttcagcagcacttt
gagaagacgcgttcccttgctccgtctacgcctctaacgggtcgacggtatctgaaggag
aaagaggtgctggtcacccccgtttcctcagctacccaaagtgtgagtcgactgcagagc
atggtgtccggcctccgaaacgctccgagcgatgctctggttcaaatctttaattcctgc
tctcgaaatcccactgagtccattctgaaccgagtgaagaccatgggagagaggtttaaa
caggcctacaccaaacccacagatgacctgccaggagcacatatggattttgcagagaat
cgtctgaagctggcggagatcttgtactttaagatcctggagaacatcatgactcaagag
atgaagagattacaagggaaagacatggcggtcctgttggagcaggaggtgctccattgc
tctctgttggcgtgctgtctggaggtggtgctgttcgcatacagctctcaaagaacattc
ccctggatactagaaatctttcagatcccaccattctacttttacaaggtgatcgaggtg
ttcatccggtccgaggagggtttgtcccgagacatggtgaagcatttgaacagtatagag
gagcaggtgctggaaagcaaagcctggaccagagactcggccctgtggacggcactcaat
aacgctaataataaagtccccactgtagaagaggtgaattttcccagtaattttgacacg
ggcaacaattcaggcggtcccactcacctcccattggtggcgctatctcccatcgtccac
cctcgcatcagggaggtccgcacaggcctgggctccagcgcacgcaaagacgtccctcag
tctcccatctatctccacgaccgctacagctcacctgcagccggcagcgctaagagacgc
ttgtttggtgacgatcctcctccacagtccccagtgaaaagaatctcagtcactcccatc
aaaatcattcccagcagcacagaaaacaaccagaacaccagcacaacgaccgtcctctcc
atggccacaggaaacggccagcagctcaccattccactgccagtggtaaagaaccagacg
ggtggcatcacagtcatccaacttcaggccaatgatatgcaccccctcaccgctcagttc
ttactgaccacctcccccagccgaacagcagctccacccgccagctccgacacacagcca
ccggccgtcaacaaaccccggcgcactggatccctcgccctcttcttcaggaaggtgtat
catttagcaagtgtgcgtctgcgagacctgtgtctgaagctggacatctcatcggagctg
cgagggaagatctggacgtgttttgagcactcgctgctgcactgcactgacctgatgaag
gaccggcacctggaccagctgctgctctgtgctgtctacattatatcaaagattacaaaa
caagagcacacttttcaggacattatgaaatgctaccgaacccaacctcaagccaacagt
cacgtgtaccgcagtgttttactgaagaggaggcccagagaacagcagacagatgagaac
atggaagtggatccgccggcagaacagtccaatgagaggacggaacaggcaaacacaaca
gaggctgacagcgaatcagaggaaagaggagacctcatccagttctacaactctgtttat
gtgctaaagatgaaatcgttcgctctcaaatatgcacattccacacttgataataagatg
gaggctcctccgttatctccgttcccgtcggttcgttcccagcccctctctcctcgccgt
atatctcagagacactccatctttgtctctcctcataaaaacagctcaagtctcacaccc
agtaatgcttacacgtacaagttcactggcagcccatcaaaggagctgagtgacataaac
cagatgatccgtcagggtggggtgagcaagaagcgggcgttcaccatggaaggtgatgag
accgagtctccatctaaatgcctgcggcaagagaacgacgacgtgcttctcaaacgcctg
caggatgtggtcagcgagagagcgagtctctaa

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