Carassius gibelio (silver crucian carp): 127960060
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Entry
127960060 CDS
T08819
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127960060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127960060
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
127960060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
127960060
NCBI-ProteinID:
XP_052415560
LinkDB
All DBs
Position
B6:1104564..1150361
Genome browser
AA seq
1368 aa
AA seq
DB search
MPVDMQPHQGLCHYNNTANQPSRGLARSVRSLYSDNSREMFNPSVTAGACMDPYMRPPHG
MMGHRGMPPPDSAPYCSQSMMGSHHNLTQNQLGSEHMGSRDASCFSTPRSMLKLSKKRAL
SISPLSDASVDLQTVIRTSPNSLVAFVNSRCGPNAAGSYGHLSLGSMSPSLGFSSSMNYS
CRAQGNMYGPLAASCPRLHAPAKHTHLKTEPALGSINIKSLEEHSEGDVASPSSTGTQDP
LLGLLEGRDDLDKEEKPEPEAIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVC
HWTDCSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKP
YVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPE
AHITKKHRGDTGPRPPGLTSAGHSSELLIEKEERSREDCKLLAPETTLKSQPSPGGQSSC
SSERSPLGSANNNDSGVEMNLNAAGSLEDLTTQEENTGNTGGPESSGMCMSVQALKRLEN
LKIDKLKQIRRSTPPGRSTGNKLPALPGEMMGMCAPSPLLSNRRVMELSAPDVAGVSGMG
IPCPPNDRRGSGTSSLSSAYTVSRRSSLVSPYLSSRRSSDVSQVGHCQSVMGTDVPSDPL
SPQNSQRGGSCQNPGGLPGLPSLTPAQQYSLKAKYAAATGGPPPTPLPNMDQPGNPGRFL
RECRGQPLPLFLQQGGTRRHSANAEYGTGVIYPHQAPGNNTRRASDPVRSGADTQGLPKV
QRFNSLSNVSLMSRRNALQQCGSDGPLNRHMYSPRPPSITENVMMEAMAIDPHGTADGRE
QGNMIRGGDRGFMGYQQPPHHPHNASQMSPGQEGLSCMDQVYQSPMQGQYQHEEICATGI
IGQSDIANNLLQQAEFGMSNCQLSPSGPHYPSQGVGSGPWGQTNQLHSPQTDIQYQCAGM
QGQHYPQQGVYNPTSDPGHQRVTVKPEQFHSSIGGSSSCQNTKPLHQHRHNVNMQAYPPQ
SGQGIMGRSSNANCDFRHGQMGTQVSIPQQSQVGSFPSGGGINLALTESRRSQTPMHQMK
EMMVRNYVQSQQALLWEQQQEQTDGLSVKPDGIEMGGHQQANQNLYPGNSYQGYPNQNLM
SPQQNRVPGSIKEPTAGMQGSCYGPDMVPRPPQGRKPLSRQNSLSQQTSGAYLGSPTHLS
PVHSTASPRRGVRLPPVQQQQQNSENFTNNNNNPMYYSGQIHMHHDIEKTPDGPCLAQQH
LTGIDPSTKPTSMAYSDPAPMSNALENLDLENAQIDFTSIIDDQEPSSYSPVNPPLGHHQ
CSSQTSSRLTTPQTSITLPSGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggatatgcagccacatcaggggctgtgccactacaacaacaccgccaaccag
ccgagccgaggactggctcgttcagtgcgatcgctctacagcgacaacagcagagagatg
tttaacccctcagtgaccgcaggagcctgtatggacccttacatgcggccgccgcacggc
atgatgggacaccgcgggatgcctccgccagacagcgccccctactgttcccagagcatg
atgggatctcatcacaacctcacacaaaaccagcttggatctgaacacatgggatccaga
gacgcgtcttgtttctcgacgcctcgctccatgctgaagctgagtaagaagcgtgctctg
tccatctctcctctgtctgatgccagtgtggacctgcagacggtcatccgcacctctccc
aactctctggtggcgtttgtgaactctcgctgcgggccgaacgctgccggctcgtacggg
catctgtctttgggcagcatgagtccgtcgctgggtttctccagctccatgaactattcg
tgcagagcgcaggggaacatgtacggccctctcgctgcatcatgccccagactccacgca
ccggccaaacacacacacctgaagacagagccggctctgggcagcatcaacatcaagagt
ctggaggagcattcggagggagacgtggccagtccatcctccactgggacacaggatcct
cttctgggtttactggagggcagagatgatctggataaggaggagaaacctgaaccagaa
gccatttacgagacaaactgccactgggagagctgcagcaaagagttcgacactcaggag
caactcgtgcatcacatcaataacgagcacatccacggagagaagaaggagttcgtgtgt
cactggacggactgttctcgagagcagcggccctttaaagcccagtacatgctggtggtg
cacatgcgcagacacacgggagagaaacctcacaagtgcactttcgaaggctgtaataaa
gcgtactcgcgtctggagaacctgaagactcatctgcgctcgcacaccggagagaaaccc
tatgtgtgtgaacacgagggctgcaacaaggctttctccaatgcatccgaccgcgcaaag
catcagaaccgaacacactccaatgagaaaccgtacgtgtgtaagatcccgggctgtacg
aagcgctataccgacccgagctctctgaggaagcacgtgaagacggtgcacggacccgag
gctcacatcactaaaaagcaccgcggagacaccggaccacgtcctccgggtctgaccagt
gcaggacatagctctgaacttctgatagaaaaagaggagagaagcagagaggactgcaaa
ttactcgctccagaaaccacactgaaatcccagccaagtcctggcggccagtcatcttgt
agtagcgaacgttctccactagggagcgctaacaataatgacagcggagtggagatgaac
ctcaatgcggcggggagtctggaggacctgaccacacaagaggagaacaccgggaacacc
ggcgggcccgagtcgagcggaatgtgcatgtccgttcaggccttgaagaggttggagaac
ctgaagatcgacaaactgaagcaaattcgccggtcaacaccacctgggcggagcacaggg
aataaactgccggctctcccaggagagatgatgggcatgtgtgctccttcacccttgctc
tccaaccggcgtgtaatggagctatctgccccggatgtagccggagttagtggaatggga
ataccctgcccaccaaacgaccggcggggcagtggcaccagcagcctcagctctgcctac
acagtgagccgccgttcgtctttggtctcgccctacctatcaagcaggcgctccagcgac
gtgtcccaagtgggtcactgccagtctgtaatggggaccgatgttcccagtgacccactg
tctcctcagaacagccaaaggggcggatcatgccagaaccctggagggttgccaggtcta
ccgagtctgactcctgcgcagcagtatagtctgaaagctaaatatgcagcagcaacaggt
ggcccaccgccaaccccgttacccaacatggaccaacctggcaaccctggaagattcctg
agggaatgccgtggccagcctcttcctctgtttctgcagcaaggtggcacgaggagacac
agtgctaatgccgaatacggcactggagtgatttatccacatcaggcacctgggaacaac
acgaggcgcgccagcgatccagtacgctctggtgcggacacacagggtttacccaaggtg
caacgctttaacagcttaagcaatgtgtcccttatgagtcgccgcaatgcactgcaacag
tgcggatctgatggccctctcaacaggcacatgtactcgcctcgtccaccaagcatcact
gaaaatgtcatgatggaggccatggccatagatcctcatgggactgctgatggcagagag
caaggcaacatgatccgaggtggagaccgaggctttatgggctaccagcaacctccccac
caccctcacaatgcaagtcaaatgtctcccggacaagaaggacttagttgtatggatcaa
gtctaccagtctccaatgcaaggtcaataccagcatgaggagatctgtgccactgggata
attggtcaatctgacattgcaaacaatcttctacagcaagctgagttcggcatgagcaac
tgtcagcttagcccctccggtccacattatcccagccagggtgttggatcaggaccctgg
ggtcagaccaaccagctccacagccctcagaccgatatccagtaccagtgtgcaggcatg
caaggacaacactaccctcaacagggtgtgtacaaccctacatctgaccctggacatcaa
agagttactgtaaaaccagagcagttccattcatccataggagggtccagttcttgccag
aacactaaaccattacaccagcatcggcataatgtgaatatgcaggcgtatccaccgcag
tcaggtcaaggcatcatgggtaggtcctccaatgcaaactgtgacttccgtcacggccag
atgggaacacaagtcagtattccacagcagagccaagtcggatcgttcccgagtggtgga
gggatcaatcttgcactaacggagagccgtaggtcgcagacgccaatgcatcaaatgaag
gaaatgatggtgaggaattatgtgcagtcccagcaagcgctcctttgggaacagcaacaa
gagcaaacggatggtctctctgtgaagcccgatggcattgaaatgggaggacatcagcaa
gctaaccagaatctttatcctggaaactcctaccagggctacccgaatcagaatttgatg
agcccacagcaaaatcgagttccaggttccatcaaggagcctaccgcagggatgcaggga
tcctgctacgggccagatatggtgccacgaccacctcagggacgaaagcctctgagtcgc
caaaacagcctatcccagcaaacaagtggagcttacctgggcagcccgactcacctgagc
cccgtccactccaccgccagtcccagaagaggagtccgtctcccaccagttcaacaacag
cagcagaattcggaaaacttcaccaataacaacaacaaccccatgtactactcaggccag
atacacatgcaccatgacattgagaagactccggatggaccatgcctggcccagcagcac
ctgacagggatagaccctagtaccaagcccacctcgatggcctactcagaccctgcaccc
atgtccaacgccttagaaaacctggacttggagaacgctcagattgactttacttccatc
attgatgaccaagaaccttcatcttacagtccagtaaacccacctctgggtcaccaccag
tgctcctctcagacctcctcccgtctcaccacaccccaaacctccatcacccttccaagt
ggcctttccaatatggcagtcggggacatgacctcgatgttgacgtcccttgctggggag
aacaagtatttgaacacattgtcttaa
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