Carassius gibelio (silver crucian carp): 127960115
Help
Entry
127960115 CDS
T08819
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
cgib04148
Efferocytosis
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127960115
04148 Efferocytosis
127960115
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127960115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127960115
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127960115
Hops complex
127960115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF4026_N
Motif
Other DBs
NCBI-GeneID:
127960115
NCBI-ProteinID:
XP_052415651
LinkDB
All DBs
Position
B6:complement(24316668..24327075)
Genome browser
AA seq
835 aa
AA seq
DB search
MAFVTANWNPLGESFYRKIELYEMGWNLKDGLKDSLVAAAPYGGPIALLKGHNRRSSSAR
PQLEIFSSSGLPLASFPWKSGVVKQLGWTVSDDLLCVQEDGTVLVYDLWGGFKRHFSMGN
ELSQSQVLETKIFHSPYGTGVAILTGALRYTLATNIDDIKLRRLPEVPGLQGAPSCWAVL
TQDRQSKVLVANGSQLFILDNTACTPVTPPGLSPQASSIVHMCVSFSYKYLALLTDSGHV
WMGTSNLKEKLSEVDTNIKTPPKQMAWCRRPKSQQPSAVVMWDGLLIVVGECKETIQYHL
DDDSVLVPELDGVRIISGTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLSEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPEQFVSMCR
DLRVLNAVRDYTVGIPLTHTQFKQMTVQVLIDRLVYRKLYPLAIEVCRYLKTPEYQGVSR
VLKHWACYKVQQKEESDEVIAKAVSVKLADAAGISYSEIATKAYESGRTELAIKLLEFEP
RSGEQVPLLLKMKKSPLALSKAIESGDTDLVYTVVMYLKNELNRGDFFMMLRNQPVALSL
YKQFCKHQEQDTLKDLFNQDDDHEELGNFYVKASYKEQRLEARIALLQSAVDEYYKAKNE
FSAKTTEDEMRLLRFQRKLEEEKGELLVGFSLHDTMTTLLSVGLHKHAEQLYKDFRVPDK
RFWWLKLKALAEKEDWEELEKFGKSKKSPIGYLPFVEVCIKHHNKYEAKKYVSKVTPEQK
VKAHLAVGDMEGAAEAAIERRNESEISTVLSRCSATTDHLLMERLNRARATAVKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaaccctctgggcgagtctttttacagaaagattgaa
ttgtatgagatgggctggaatctgaaagatggcctgaaagattctctggttgctgcagct
ccatatgggggtcccatcgctctcctaaagggtcataaccgacgctcttccagtgccaga
cctcagttagagatcttctcttcctcaggactgcctctggccagttttccatggaagagt
ggagtggtgaagcagctgggttggacggtgtctgatgacctgctgtgtgtccaggaggat
ggcactgtgcttgtctacgatctctggggtggcttcaagagacacttcagcatgggcaat
gaactttctcagagtcaggtgctggagaccaagattttccattcgccctatgggacaggt
gttgccatattgacaggtgccttgcgatacactttggccacaaatattgatgacataaaa
ttgaggcggttgcctgaggttccaggtctacagggggcaccctcatgctgggcagtcctg
acacaggacagacaaagtaaagtgctggtggccaatggatctcaattgttcatcttagat
aatacagcctgcacacctgtgactccccccggtctctctccacaagcgtccagcatagtt
cacatgtgtgtctcattcagttataagtatctggcgctcctcaccgactctggccatgtg
tggatgggcacatccaacctaaaggagaaactcagtgaggtggacactaacatcaaaact
ccccctaaacagatggcctggtgtcgcaggcccaagagtcagcagccatcagctgtggta
atgtgggatgggctcctcatagtggtgggagaatgtaaagaaactattcagtaccacctg
gacgatgactccgttctggtgccggagctggacggggttcggatcatcagtggaacacac
catgagcttctgcaagaggtcccaggtgcatgtgaggagatctttaaaattgcctcaatg
gctcctggagcattacttctggaggctcataaagaatatgagaaagagagtcagaaggca
gatgagtacctgagagagattaaagagcagagtctgttgagcgaggctgtgaggcagtgt
gtggaggccgccggacatgaacatgaacctgagacacagaaaacactcttgagggcagcc
tcatttgggaagtgctttttgagtaattttcctccagagcagtttgtcagcatgtgcaga
gacctgcgggtgttgaatgcagtccgagactataccgttggcattcctcttacccacact
cagttcaaacagatgactgtgcaggtgctcattgacagactggtgtatcgtaaactctat
ccgcttgctattgaggtttgccgctatttaaagactccagaatatcagggagtgagccga
gtactcaaacactgggcctgctacaaggtccagcagaaggaagaatcagatgaagtcatc
gcaaaagctgtgagtgtgaagcttgctgatgctgctggaatctcctactctgaaatcgcc
actaaagcatatgagagtggacgcacagagctcgccatcaagttgttggagtttgagcct
cgttccggcgagcaggtcccactgctgttaaaaatgaagaaaagccctctggctttgagc
aaagccattgagagtggagacacagacctcgtgtacacagtggttatgtacctgaagaat
gagctgaacagaggagacttcttcatgatgttgaggaaccagcctgtggctctgagcctc
tacaaacagttctgcaagcatcaggagcaggatacactcaaagatcttttcaatcaagat
gatgatcatgaagaacttggcaatttttatgtgaaggccagctataaagagcagagactg
gaagctcggattgctcttttacaaagtgctgtggacgagtactacaaagccaagaatgaa
ttttctgccaagacaacagaagatgaaatgcgtcttctgcggtttcagaggaagctagag
gaagagaagggtgagttgctcgtgggattctcccttcatgacactatgaccacgctgctg
tctgtgggactgcacaaacacgccgaacaactttacaaagacttcagagtccccgacaag
aggttctggtggctgaagttaaaggctctggctgagaaggaggactgggaagagctggag
aaatttggcaaaagcaaaaaatctcctattggatatctgccatttgttgaggtgtgcatt
aaacaccataacaaatatgaagccaagaagtatgtgtctaaagtcacacctgagcagaag
gtcaaagctcaccttgcagtgggggatatggagggtgctgcagaggctgctatcgagagg
cgtaatgaatccgagatcagtactgttctgtcacgctgttcagccaccactgatcatctt
ctgatggaacgtctcaaccgtgctagagccactgctgtcaaaaagtga
DBGET
integrated database retrieval system
