Carassius gibelio (silver crucian carp): 127960201
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Entry
127960201 CDS
T08819
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127960201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127960201
03110 Chaperones and folding catalysts [BR:
cgib03110
]
127960201
04131 Membrane trafficking [BR:
cgib04131
]
127960201
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127960201
Chaperones and folding catalysts [BR:
cgib03110
]
Heat shock proteins
HSP40 / DNAJ
127960201
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
127960201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
127960201
NCBI-ProteinID:
XP_052415755
LinkDB
All DBs
Position
B6:12959941..12989967
Genome browser
AA seq
968 aa
AA seq
DB search
MSLLGGYKKKSSYDGYESLQLVDSSGDFCTGGRSGGGGGLTAGTLGSVKTGPARQDDYST
MDSSGAPSPDMDGNIGGGLLDMVKGGAGKFFSNIKDNLKDTIKDTSTKVLNQVATYTKGE
LDIAYITSRIIVMSYPAEAVEMGYRNHTEDIRSFLDSRHADHYTVFNLSQRNYRGAKFSN
RVSECNWPSRQAPSLHNLFAVCKNMYNWLKQNPKNVCVITCSDGRAPSGVLVCAMFCFCH
LFANPVPAMQLLSAKRPGSGLWPSHKRYIGYVCSLVSEKPTVPHSKPLVIKSVTMSPVPC
FNKQRNGCRPFCDVLIGETKIFSTAQEYEKMREYRIQEGKVVFPVSVSAQGDVVISVYHM
RSHALQAKVTNTQIFQIQFHTGFIAPGTTVLKFMKTELDACDSPEKYPQLFHVLLDIEVE
STEKQKDLTPPWEQFPTKDLTPNVLFSCHQEHQDALAIADPAQGHGSCGGRVGPNEESEP
SDDEMLSLSSQQSNTSNEKSKAAKKPEPQPAAAPPPAAEEVDLLGLGGDAATLPPSSPQP
PTTDLLGDLFGAPPTPQPASGPASAQSTPRRSATSSSPCPSPRSGDTFDPFGSGPAPAPK
PQDFMGAFLGPGNMGQPDPFLHAARSPSPTMQNMGMGRSSPVPPTTPTVTIQQQSSTGAW
EWNKPAPAGAGFGMGSKSASTSPTSSVHGTPTHQAKANTLDPFADLGNLGAGLGGAGSGF
SSKPTTPTGTGGAFPPMGSPQRPAPSPQHTASGGWHPSTGFPSWQPGGGPQWQPQTQGAQ
HQTPPKVPGPSMPHTSPQNRPNYSVSFSSMSGASPGATGAKAQPNMGTRPKVSDTNFDDL
LSAQGFAGTKEKKGPKTIAEMRKEEMAKGMDPEKLKILDWIEGKERNIRALLSTMHTVLW
EGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFIELNDAWSEFE
SQGQKALY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctaggtggctacaagaaaaagagcagttacgatggctacgaatctttgcag
ctggtcgatagcagtggagacttctgcaccgggggacgaagcggaggaggcggcggtttg
acggcagggaccctcggcagcgttaaaacaggccccgcgcggcaggacgactacagcacc
atggacagctcaggtgctccgtctccagacatggatggaaacattggagggggacttctg
gatatggttaaaggaggtgctggaaagttcttcagcaacatcaaggacaacctgaaagac
accatcaaagacacctcgaccaaggttttgaaccaagtggccacgtatacaaaaggagag
ttggacattgcatacatcacctcacgtattattgtgatgtcatatcctgctgaggcggtg
gagatgggctacaggaaccacaccgaggatatccgttcctttctggactcacggcatgcc
gaccattacacagttttcaacctgtcacagaggaactatcggggggccaagttctccaac
agagtttctgaatgcaactggccttccagacaggccccgagtcttcacaacctatttgct
gtgtgtaagaacatgtacaactggctcaagcaaaaccccaagaatgtgtgtgtgatcacc
tgttcggatggcagagctccttcaggcgttctggtctgtgccatgttctgtttctgccac
cttttcgccaacccggtgccagccatgcagcttctcagcgccaagaggcctggatctggc
ctgtggccctctcataagaggtacataggttatgtatgcagtttagtctcagagaagcca
accgtaccacactccaaaccactagtcattaaatccgtcactatgagtcctgttccttgc
ttcaacaaacagcgcaatggctgtcggccattttgcgacgtacttatcggcgagaccaag
atattttctacagctcaggagtacgagaaaatgagggaatacaggattcaagagggcaaa
gtggtgtttcctgtgagtgtgagtgcccaaggagacgtggtgatttcagtctatcacatg
cgttcccatgccctgcaggccaaggtaaccaacacccagatattccagattcagttccat
actggtttcatcgcccctggcaccacagtcttaaagtttatgaagacagagcttgatgcc
tgtgattctccagagaaatacccacagctgtttcatgtgctgttagacattgaggttgaa
agtacagagaaacaaaaagatctcacgccaccgtgggagcagttccccaccaaagacctg
acccccaacgtgcttttctcctgtcatcaggaacaccaggatgcacttgctattgcagat
cctgcccagggacatgggagttgtggaggcagagtgggcccaaatgaggagagcgaaccg
tcagatgacgaaatgctctccctttctagtcagcagagcaacacgagcaatgagaaatca
aaagcagctaagaaaccagagccccagcctgcagcggcccctcctccagcagctgaggaa
gtggatctgctgggtctgggtggtgatgccgctacgcttcctccatcctccccacaacct
ccgaccacagacctgctgggggacctgtttggagctcctcccacaccacagcctgccagt
ggccccgcctctgctcagtccaccccgcggagatcggcaacttcctcctcaccctgtcca
tcacctcgatctggagacacttttgacccatttgggtctggacccgctcccgcccctaag
ccgcaggacttcatgggagctttcctgggtccaggtaatatggggcagccagaccccttc
ctgcatgctgcacgatctccatctcctacaatgcagaacatgggcatgggtcgcagttca
cctgtgccgcccactactcccactgtcaccatccagcagcagagctctacaggagcctgg
gaatggaacaaacctgcacctgcaggtgcaggttttgggatgggaagtaagtctgccagc
actagcccaaccagctcagttcatggtactcccacccaccaggccaaagccaacactttg
gacccgtttgctgatctgggtaacctaggagccggtctgggaggagctggttcgggattc
tccagcaagcccaccacacctactggtaccggaggagcgtttccacccatgggctcccct
cagcgtcctgctccctctccccagcacactgcctctggaggctggcatcccagcacaggt
ttcccctcatggcagcctggaggtgggcctcagtggcagccacagacccagggtgcacag
caccagaccccacctaaagtaccaggaccctctatgcctcacacttcaccacagaacaga
cccaactacagtgtcagcttctccagcatgagtggagcttcgccaggagccactggggca
aaagcacagcctaacatgggaaccagaccaaaggtttcggacaccaactttgatgacctt
ctttcagcccagggttttgctggcactaaggagaagaaggggccaaaaaccatagcagaa
atgagaaaagaggagatggcaaaaggaatggacccagagaaactcaagatcctggactgg
attgaggggaaggagaggaacatcagagcattgctatccaccatgcacacagtgctttgg
gagggagagacacgctggaaacctgtaggcatggctgacctggtcacaccagagcaggtg
aagaaggtctaccgcaaagctgtgctggtggtgcatcctgacaaggctactggacagccc
tacgaacaatatgccaagatgatttttattgaactaaatgatgcctggtcagaatttgaa
agccaaggacagaaagcactttactaa
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