Carassius gibelio (silver crucian carp): 127961076
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Entry
127961076 CDS
T08819
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04136
Autophagy - other
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127961076
04136 Autophagy - other
127961076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127961076
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127961076
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127961076
Atg1 complex
127961076
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127961076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127961076
NCBI-ProteinID:
XP_052415966
LinkDB
All DBs
Position
B7:complement(18935941..18949473)
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AA seq
536 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQIIVQARLGEKISTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGIVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDEGG
TYAGIEDSQEVCNTSFSTSPPSQCVCTLSQAHFKTPKSTLMAKLKVPLLGLGISQQLYSS
RLSYQTPALGTVDLCHHTGCTAAAHPHQMVVPGKEGGVPQVPDQPTHGTAAEHSRIPSCP
TGHSPQPAPPTSCSSEVKTVSPSDALESNFTRKVGAFVNKPTTQVTTTSLDLPFAAFAPR
ACDLQENDPMVHPPPSPAPSSPLQSSLHSNSSSHSGGQPQDDFVMVDFKPAFSKDDLLPM
DLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctgagcccacaggacaagaaagacttggataaattcatcaaattcttt
gccttgaagacagtgcaaattatagttcaagcccggcttggagagaagatcagcacttgc
tcttcttcatcaccgacagggtcagactggtttaatctggcaataaaagacatcccagag
gtgactcatgaagcaaaaaaagctctcgccggacaactgccaggcatcggccgatccatg
tgtgtggagatctccctcaaaacctcagagggagactccatggagctggagacatggtgt
ttggaaatgaatgaaaagtgtgataaggacattaaagtgtcctatacagtttataatcgg
ctgtctctgctgctcaagtctttgctggccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaaggacatgattatgtcatactctacaggatctattttggagaagtccaa
ctgacaggtctcggggaagggttccagacagtgcgagtgggtatcgtaggcactcccata
ggcaccattactttgtcctgcgcatatcgcactaatttggccctcatgtcttcaaggcaa
tttgagaggacaggccctatcatgggtatcatcattgatcattttgtggagcgtcccttc
actaatatggcacacatgcatccctgcagttacagagcgcctggagaagatgaaggaggg
acatatgcaggaatagaagactctcaggaggtgtgcaacacatctttttccacctcccca
ccatcgcagtgtgtatgtacattaagtcaggcacattttaagacacctaagtcgactctg
atggccaaactgaaggttcccctcttggggcttggcatctcacagcaactgtacagctct
cgtctctcatatcagactcctgccctgggaactgtggatttgtgccatcatacgggttgt
actgctgctgcacatcctcaccagatggttgtgcccggcaaagaaggtggagtcccacag
gtgccggatcagcctactcatggcactgcagctgagcatagtcgtatcccatcatgcccc
actggacattcccctcagccggcaccgcccacatcttgtagtagcgaggtgaagactgtg
tccccctctgatgctctagagtccaacttcaccaggaaagttggagcttttgtcaacaaa
cccaccactcaggtgacaacaaccagtttggatcttccttttgctgcattcgctccaaga
gcctgtgacctgcaggagaatgacccaatggtgcaccctcctccatccccggctccttca
tctcctttgcaaagcagcctgcactcgaacagctcgagccacagcggggggcagccacaa
gacgactttgtcatggttgactttaaaccagcattctctaaggatgaccttctgccaatg
gatctgggaactttctatcgagagtttcaaaaccctcctcaacttgcaagcctgtccatc
gatgtcagcgctcagtcaatggctgaggatctggactctcttccagagaaactggccatt
tatgagaagaacattgacgagtttgatgcgtttgtggacacgctacaataa
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