Carassius gibelio (silver crucian carp): 127961223
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Entry
127961223 CDS
T08819
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127961223
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127961223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127961223
NCBI-ProteinID:
XP_052416202
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Position
B7:17328415..17331826
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AA seq
455 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGIGSARAGTDLSPSGALSNVLSTMYGSPFAAAQSYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEE
GNVYNSDHEGEDGDKREDEEEIDLENIDTENIENKDDLDEQDELHSDLKLDGRSDSEISD
GYEDLQGPEQRLFKAMVKDGKEIHGDRAEHFHNHSHHHHHHHHNNLEQANSEPVKLNQAI
INSPPSENNPPPAPKPKIWSLAETATTPDNPRKSPLMNGTSAASAAQTIITPHRLLSCPV
GKIQSWANRGFTAHQLALLNSNHYLGLSNQASANGLALYSRQTEDRSQNSESTVTERSSA
LEAEKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggatatcagtatatccgacccatatacccgcaggacaggcag
gggataggcagtgcccgagccgggacagacctgagcccgtccggggcgctctctaatgtt
ctctccactatgtacggatcacctttcgctgccgcacaaagctatggagcttttcttcct
tattcaaatgatctgtccattttcaaccagctgggggcacagtacgaactgaaggacagt
ccgggcgtccagcatcctggatttgcccaccatcaccctgctttttacccatatggtcag
taccagttcggagacccttccagacccaaaaatgccaccagggagagcaccagcacgctc
aaggcctggttaagtgagcaccggaaaaacccgtaccctaccaaaggcgagaagatcatg
ctggccattatcaccaaaatgaccctcactcaagtgtccacctggttcgccaacgccagg
aggaggctaaagaaggagaacaagatgacctgggccccacggagtcgcacggacgaagaa
ggaaatgtttacaacagcgatcacgagggagaggacggtgacaaacgcgaggatgaggag
gaaatcgatttggaaaatattgacacggagaatattgagaataaggacgatttagacgag
caggacgagctgcattctgatttgaaactggacggcaggagcgactctgaaatttcagac
ggctatgaggatttacaaggaccggagcaaaggttgttcaaagcgatggtgaaagacggc
aaagagattcacggcgaccgcgcagagcactttcacaatcacagccatcatcatcatcac
caccaccacaacaacttagaacaggccaacagcgaaccggtcaaactcaaccaggccatc
atcaactctccgccctcagaaaacaacccacctccggctccaaaacctaagatctggtct
ttggcagagaccgccacaactccagacaatccacgaaaatctcctctgatgaacgggact
tccgctgcgtccgccgctcagaccatcatcactcctcacagactcctttcgtgtcccgta
gggaaaatccagagctgggcaaatcggggtttcaccgcacaccagctcgccttgctgaac
tcaaaccactatttaggactcagtaaccaggcttcggcaaatggccttgccctgtacagc
agacaaacagaggacaggagtcaaaactccgagtccacagtcacagaaagatctagtgcc
ttggaagcagagaaaaagttgttaaaaacagccttccatcctgttcagagacggccccag
aaccaactcgaagctgccatggtgttatctgccctctcgtcctcgtag
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