Carassius gibelio (silver crucian carp): 127961237
Help
Entry
127961237 CDS
T08819
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127961237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_9
LRR_13
Motif
Other DBs
NCBI-GeneID:
127961237
NCBI-ProteinID:
XP_052416216
LinkDB
All DBs
Position
B7:20448106..20530395
Genome browser
AA seq
2045 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHN
LRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQALEIADFSGNPLSRL
PDGFSQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLSENLLEVLPDSIGSLKKLSILKVNQNRLVHLTDSLGECENLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCASLNVLSLRDNRLGKLPAELGNATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SSSLENLLERSVDETWPTDTNLNRVSVIHFQDDSKHEEEDEESAAEKRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEDLESPDSEEKRLSGLSNQSHDSQASSSTASANSQDEK
RGVHSTGVEINDGQGQEEEELDEMEVEYTEPTVHFAEDPIIRGGDEEEEDENEEDDEDAE
RSDEDPRTPSFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSHDGLSPTAHTP
EDERDGEEEEEDEEDEGGVTVNTPFQQRLEAAELEDSRLSQMNSSLQPVKGVSFDQVNNL
LIEPARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVK
VGDKLLEVNGVDLHGAEHHTAVEALRNSGTAVVMTVLRERMVEPENAITTTPLRPEDDYF
PRERRSSGVPFLLDPASPAVSAGPMLKLATCLIRNDKGLGFSIAGGKGSTPYRVGDTGIF
ISRIAEGGAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVERDQASA
GGASPRTRPHSPPPPEPSDSPEQEEGDEHLGNHLNCPMEDEYPIEEVTLIKAGGPLGLSI
VGGSDHASHPFGINEPGVFISKVIPNGLASQSGLRVGDRILEVNTIDLRHATHQEAVRAL
LSNKQEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISK
VSSSGAAARDDRLRVGMRILEVGNNSLLGMTHTEAVRVLRAAGDSLVMLVCDGFDPRNAA
GIEASPGVIANPFASGIVRKNSMESISSVDRDLSPEEIDIMQKEVEMVRETSQWEREEMD
KVERMRLEREEATRLLEEETENLSTGPLKLDYKTLAALPTTSLQRVNRFSPSFATFFTME
AAMPAVPVDPLGFEKVHASMYHIEPVALPSSPVCPAASSAASKPPPADTWDPLPAPGVPQ
EATEEEECLVDSQPICFSENPFLVANRKSKGCPPDERILSGPPVGYGRHGQLQPWLYSKS
SPSEPHRIDSPVRDAAHSPHNSQQSHKSSSVMLGREVRYSNINFPSNANTKDNSSTKPGA
IQPLSRVRPAVSPASQDGNSSPNPFQHGLSPINSQTTPSAPSPDTHEEYPINIKQVYKAF
AAVPHSLAVLEAPQDLYSPRNNVSAKQPSPEPELNNEVFMDEADGEGSGPLRARPSLSSD
RREYRSLAAVPHMSRPSVESKTPSSFGRDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRIS
LVGEDDLKKMKEEEAKRIEQSAREYMLDEDEEDEEEDLAKQVADMKAHGKVILDGVEYKV
ESLGGHSSPSPRQCATPPSHCGSSGPSSVDGKGDSQRNSMEDSFRLEQRPNSMTGLIPVY
PGESVAPIRTAKAERRHQDRLRMQSPELSVAMDKELSPAEKRALEAEKRAMWRAARPYGL
EEDVRQYEQDLAKRLYQSRVRASLGSAAASPTSCSSSSCQPRMKSLEQDALKAQMVIAKS
KEGKKRGTLDQLSESPSPAPTPSPTPMEDISPRAVTSPGRLSLSEKKFDYRQFAAIPSSK
PVYDIQSPGAGDDVRFMDDASSNPVSVVDPEVPLATTSALEEMALYSNKRKLRQGRRSLE
APVPT
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgtaaccgtcacgttgagtccgtggataagcgg
cactgctcgctcactgcggtgcccgacgagatctaccgctacaaccgcagtctggaggag
ctgctcctggacgccaaccagctgagagagctgcccaagcctttcttcagattgcacaat
ctgcgaaaactgggcctcagcgacaatgagattcagaaattgccgcccgacgttgccaac
ttcacacagctggtggagctagacatctctagaaatgatatttctgagattcccgaaaac
attaaattctgtcaggccttggagattgcagacttcagcggaaaccccttgtccaggttg
cctgatggcttctcacagctcagaggactggctcacctatcactcaatgacgtgtcgctg
cagtctctacccaatgacattggaaacttgtcaaacctggtgactctagaactgagggag
aatctactgaaatctttaccctcctctctttccttcctggttaaactggaacagctggat
ctgggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctttggttggacagaaaccagctctcctcactacctcctgagctggggaacctgcgg
cagctggtttgcttggacgtgtcagagaaccgtctatcagagcttcccacagagatcagt
ggccttatcgccctcacggacctgctgctctctgagaacctcctggaagtcttgccagac
agcattggctcacttaagaagttgtccattctgaaagtgaaccagaaccgcttggtgcat
ctcacagactctcttggcgagtgtgagaacctgacagagcttatgttgactgagaatctt
ctccagtccctccctcgctcacttgggaagctgaagaagttgaccaacttgaatgtggac
cgaaaccgcttgagcagcgtgccagcagaactgggaggatgtgccagcctgaacgtgctc
tctctcagagataaccgtttgggaaaactgcctgctgagctcggcaatgcaacagaatta
catgtgctggacgtggcaggcaacaggttgcagaatttaccattcgcattggccaatctc
aacctgaaggctatgtggctggcagagaaccagtctcagcccatgctgaagttccagaca
gaggacgatgagcagactggggaaaaagttctcacctgctacctgctgcctcagcaaccc
tcatcgagccttgagaatctactggagaggagtgttgatgaaacctggcccacagacact
aatttgaacagggtatcggtcattcacttccaggatgactccaaacatgaagaggaagat
gaggagagtgcagcagagaagaggcagggtcttcagaggagagccacacctcatcccagt
gagttgaaggtaatgaagaatgtcattgaagccagaagaaatgaggcttatacagccaag
ccagatgaggatctggagtccccggactctgaggaaaaacggttgagtgggctgtccaat
caaagtcatgattctcaggcatccagtagcaccgcctctgccaattctcaggatgagaag
cggggtgtacacagtacaggtgtggagattaatgatggtcagggtcaagaggaggaggag
ctggatgagatggaggtggagtatactgagcctactgtgcactttgctgaagaccccatc
atccgcggcggtgatgaggaggaagaagatgagaatgaagaggatgatgaagatgctgaa
aggagcgatgaggaccctcgaacaccatcttttcctgcagagaaacagcggctcatacgt
aaagacacaccacactacaaaaagcacttcaagatcacaaagctgcccaaaccagagact
gttgctgctctgctgcaaggcttcagtcatgacggcctctcacctactgctcacacccct
gaggacgagagggatggtgaggaggaggaggaagatgaggaggacgagggaggagtaaca
gtcaacaccccttttcaacaaagactagaagcagctgagttagaagacagcaggctgagt
cagatgaactcgtccctgcagccagtgaagggggtgtcatttgatcaagtcaataatctg
ctgattgagcctgctcgaattgaggaggaagagctgaccctgactatcctgaggcagacc
ggtgggttgggcatcagcatagcaggggggaaaggatctacaccctataagggcgatgat
gagggtattttcatctctagagtatcagaagaaggccctgcagctcgtgctggggtcaaa
gtgggagacaaacttcttgaggtgaacggagtagacctgcacggagcagagcatcacaca
gccgtcgaggccctgcgcaattcagggacggccgtggttatgactgttctgcgagaacgc
atggttgaaccggagaatgccatcaccaccacgccactgagaccagaagatgattatttc
ccccgggagagacggtccagtggggtgcctttcctcctggaccctgcctctcctgctgtc
agcgctggaccgatgctgaaactagccacttgtctgatccgaaacgataaaggtttaggg
ttcagcattgctggagggaaagggtcgaccccgtaccgagtaggagacacgggaatcttc
atctctcgtattgctgaaggaggagctgctcacagagacaatatcctgcacgtgggagac
agggtcatatcaatcaatggtgtagacatgacagaggccagacatgaccaggcagtagcg
ctgcttaccggcacctcccccaccatcaccctcctggttgaacgggaccaggccagtgca
gggggcgcctcccctcgaactcgacctcattcgccccctcctccagagccgtctgactca
cctgagcaagaggaaggagatgagcaccttggaaaccatctcaactgccccatggaggat
gaataccccattgaggaagtgacgctgatcaaagcaggtggtcccctgggtctgagcatt
gtagggggtagcgatcatgccagccacccgtttggaattaatgagccaggggtgttcatc
tcaaaggtcatccccaatggcttggcctctcagagtggacttcgtgtgggcgatcgaatc
ttggaggtgaacaccatcgacctccgacatgccacacatcaggaagctgtcagagccttg
ctctccaacaagcaggagatccgcatgcttgtgcgcagagatccctcgccccctggcatg
caggagattgtcattcacaagcagcctggagaaaagctgggcatcagcatcaggggcgga
gctaaaggccatgcaggcaacccctttgaccccacagatgagggaatcttcatttccaag
gtgagctcgagcggagcagctgcacgggatgatcgactgcgagtaggcatgcgtattctt
gaggtgggcaacaacagtctgctgggtatgacacacacggaagcagtgagggtcttgcgt
gctgccggtgactctctggtcatgcttgtgtgtgatggctttgatccaagaaacgctgca
ggcatcgaggcatcgcctggtgttattgcaaacccgtttgcgtcaggtattgttcgtaag
aacagtatggagagcatctcatcagtcgacagagacctgagtccggaagagattgacatc
atgcagaaggaggttgagatggtgagagagacgtcccagtgggaacgggaggagatggat
aaagtggagcgcatgcgcttggagcgtgaggaggcaactcgtttgctggaggaggaaact
gagaatttgagcactggaccactgaaactggactacaagacactggcggctctacctacc
actagcctacagagagttaatcgattttctccctcctttgctacattcttcacaatggag
gctgccatgccggccgtccctgtagaccccctgggttttgagaaagtccatgcctctatg
taccacatagaacctgttgccctcccttcatctccagtctgcccagccgcaagttcagcg
gcttcaaaacctcccccagctgacacatgggaccccctcccagctccaggagtcccacaa
gaagctacagaggaagaagaatgtcttgtggactcccagccaatctgctttagtgaaaat
cccttccttgtggctaatcgcaagagcaaaggctgccctcctgacgagcgcattttatct
gggccacctgtgggttatggcaggcatgggcagctgcagccctggttgtacagcaagtct
tcaccgtcggagcctcacaggattgacagtcctgtccgagatgctgcacactctccacac
aactcccagcagtcccacaagtcttcctctgtgatgcttggaagggaggttcgatattca
aacattaatttcccttcaaatgcaaacaccaaggataattcatcaactaaacctggtgcc
atccagcccctctctcgggtgcgacccgctgtgtctccagccagtcaggatggcaacagc
agtcccaaccctttccagcatggcctctctcccatcaactctcagaccactcctagtgcc
ccatcccctgacacacatgaggaataccccatcaatatcaagcaggtatataaggccttc
gcagctgtgccacactccctggctgtactggaagccccacaggatctttactctccgcgg
aacaatgtcagcgcaaagcaaccgtcaccagagcctgagctgaataatgaggtctttatg
gatgaggctgatggagagggcagtggtcctctcagggctcgtccctccctctcatctgat
cgccgcgagtacaggagcctggcagccgtgccacatatgtctcgcccctcggtggagtcg
aagactccctcctcttttggcagagacagcccagagcagcgctccttcagagacaggcag
aaatattttgaaattgatgtgaagcagcagacaccagacaaacccaaacctcgcatctca
cttgtgggggaagatgacttgaagaaaatgaaagaggaagaagcaaaacgaattgaacag
agtgcacgagagtatatgctggatgaagatgaggaggatgaggaggaagatctggcgaag
caggtggcagatatgaaggctcacggaaaggttatcctcgatggtgtggagtacaaggtg
gagagcttgggaggccacagttccccttctcctaggcagtgtgccacacctcccagccac
tgtggcagctccggtccttcctccgtggatggtaaaggagactctcagcggaattcaatg
gaagacagcttcagactggaacagagacccaactccatgacgggtttgatcccagtttat
cctggtgaatctgtggctcccattcggacggccaaagcagagcgtagacatcaagaccgc
ctccgcatgcagagcccagagcttagtgttgccatggacaaggagctatcccctgctgaa
aaacgagccttggaagcagagaagagagccatgtggagagcagccaggccttatggtcta
gaggaggacgtaaggcagtatgagcaagacctggctaagcggctctaccagtcccgtgtg
agggcctctctaggcagcgctgcagcttctcccacttcctgctcctcctcttcctgtcag
cccaggatgaagtctctggagcaggatgctttgaaggcccagatggtcattgcaaagtct
aaagaggggaagaagcgtgggacgttggatcagctgtcagagtcaccgtcccctgcgccc
acaccctctccaacaccaatggaagatatcagtccacgggcagtgacttcaccaggcaga
ctgtccctgtcagaaaagaagtttgactaccgacaatttgctgccattccttcttccaaa
cccgtttacgacattcagtctcctggtgcaggtgatgacgtgcgcttcatggatgatgcc
tccagtaacccagtgtctgttgtagatccagaagttcctttggccaccacatctgctcta
gaggagatggctctctacagtaacaagcgcaaactacgacagggccgccgcagcctggag
gctcctgtgcccacataa
DBGET
integrated database retrieval system
