Carassius gibelio (silver crucian carp): 127961304
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Entry
127961304 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127961304
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127961304
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
LRR_RPS2
V-set
Motif
Other DBs
NCBI-GeneID:
127961304
NCBI-ProteinID:
XP_052416318
LinkDB
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Position
B7:24687787..24704538
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPTDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISVIEPGAFSNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDNMFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNVTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKVLEIANWPLLETLTTKSLHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKVRDHKAIHRFVDEGTTVQFPCQADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNLPND
NSANGTGATNPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGENSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggttct
gccactggctgcccctctcgatgcgagtgcagtgcccaagagcgctcagttgtgtgccat
cggcggaagctgatcgccctccccgagggaattcccactgacacacggctgttagatctc
agcaaaaaccgtttgaaagccatcaacccggaggaattcctcaactatcaacacctggaa
gagctacagctcaacgagaacatcatttccgtcattgaaccaggagccttcagcaacctc
cttggtttgcgaatactggggctacgcaacaacaagctgaagttgattcagctgggtgtt
ttcactggcctcagtaacctcactcgattagatattagtgagaataaaattgtcattttg
ttggacaacatgtttcaagatctctacaacctgaaagaactggaggtgggggacaacgac
ctggtgttcatctctcacagagcttttcatggcctcagcagcctagagcaacttactatg
gaaagatgcaacgtgacctctgtgccaacagaggctttcagtcatcttcacaacctgctg
accctcaggctgcggcatctaaacatcaacatcattcgagacttttccttcaggaggctc
tatcgactcaaagtcttagagatagcaaactggccacttttagaaaccttgaccacaaag
tccctccatggacttaacatcacaaccttgagcatcacaaactgcaatctcactgccgtc
ccttatgaggccatacagcacctggtgtaccttcgctttttcaacctgtccttcaatccg
atcgaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcatttcacttg
gttgggggccggctagtcagcattgagccttattccttcagaggactcaactaccttcgg
gttctcaatgtttccagcaatagtctaagcactttagaggaatctgcctttcactctgtc
ggcaacctggagacactggctcttcacgacaaccccctggcatgcgactgtcgtctcctc
tgggtctttcgccgtcgatggcgacttaacttcaaccgccagcagccatcttgtgaatca
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctcccaccaaattat
ttcacctgtcagaaatccaaggtccgggatcacaaagccattcatagatttgtggatgag
gggaccactgtccaattcccttgccaagcagatggagaccccgctcctatgattatgtgg
cagtctccaaaaaagcaattcatcactactaaaagcattggccggctgtcggtgtctcca
gatggcaccctcgaggttagatacgcccaaatacaagacaatggcacatacacctgcatt
gccgtcaatgcaggaggaaacgacacccgtttggctcacctacacgttcatagctactct
cccaattggccccatcagcccaataagacctttgccttcatctcgaacctgcccaatgat
aacagtgccaatggaactggtgcgacgaatccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctcggagtggtgctgttctgtctggtgctc
ttgttcctctggagccgagggaaaggcaatgccaagccaaacattgagattgagtatgtg
ccacggaaagtagatggagaaaacagcccgactgagggatctcacaagatcagtatgaag
atgatttaa
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