Carassius gibelio (silver crucian carp): 127961364
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Entry
127961364 CDS
T08819
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127961364
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127961364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
127961364
NCBI-ProteinID:
XP_052416406
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All DBs
Position
B7:complement(17138496..17142056)
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AA seq
445 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNTTRD
ATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRN
RSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLINPGELPCDRFKDESHAKDLD
PPLTDSELKDTEERTDFLAEQVKPTTSSPSVLQRGNDLITQEKPSEPGHAASTGNSNVTS
VIHSPPSAPKPKLWSLAEIATSSDRCKGSSEAPQAAGLGQSTVIASAASPTRSSPQCPLP
NNTVLSRPIYYTSPFYPGYTNYSTFGHLHSSHATNTSSTAHFNGLSQTVLNRAEALVRES
KVRSQTQVDLCKDSPYELKKGMSNI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcagccatccgcctctttggcactctattcgtgt
cctgcctacagtaccagcgtgatatcgggacctcggacagaggagctagggagatcttcc
tctggctctgctttcgctccctatgccggatctacagcgttcaccagcgcctcgccaggc
tacaattcccatctcccgtacagcgctgatgcggccgccgccactttcacttcttatgtg
agctccccgtatgaccacacgacaggcatggccggatctatagggtatcatccttacgct
gctcccttgggctcatacccatatggagacccagcttaccgcaagaatactacccgggac
gccacagccactttgaaagcttggcttaacgagcaccggaaaaacccgtaccccaccaaa
ggcgagaagatcatgctggccatcatcacgaaaatgaccctcactcaagtgtccacctgg
ttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggaccccacggaac
cggagcgaggacgaggaggaggacgaaaacattgatctcgagaaaaacgacgacgacgag
ccaaacaagcccacggacaagggagactccacagacacagaggcagatcataaactcatc
aacccaggggagctaccatgcgacaggtttaaagacgagtctcatgctaaagatcttgat
ccacctttgacagactcggaattaaaagacacagaggaaaggacggatttcctcgccgag
caagtaaaacccaccacctcttctccctccgtcctacagagagggaatgatctcattacg
caagagaagccctcagaaccgggccacgctgcgagcacgggcaacagcaacgtaacatct
gttattcattctcccccttcggcgcccaaacccaaactctggtctctagccgagatcgcc
acgtcttcggacaggtgcaaagggagcagtgaggctcctcaggccgcggggctgggtcaa
agcacagtcatagccagcgctgcctcgccgacccggtcctcccctcagtgccctctccct
aataacactgtcctttctcgacctatttactacacttcccctttttacccgggctacacg
aactatagcactttcggacacctccacagtagccacgccaccaacaccagctctacggca
catttcaatggattaagccagactgttttaaacagagccgaggctctggtaagagagagc
aaagtaagaagccaaacacaggtagatctttgtaaagactcaccttatgagctaaagaaa
ggtatgtcaaacatttaa
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