Carassius gibelio (silver crucian carp): 127961365
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Entry
127961365 CDS
T08819
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127961365
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127961365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
127961365
NCBI-ProteinID:
XP_052416407
LinkDB
All DBs
Position
B7:29195615..29272623
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AA seq
1941 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSEAKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSGQPANLNHGSLKSPELFLCYKRSRGKPPLIDIGVLYEGKERLIQGCEIIEATP
FGRCANVNNSSATSQRIFITYRRAPPVQPQNSLAVTDICVIITNKNETPPHTFCKVDKNL
NCGLWGSSVFLCYKKSVSASNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSNGEKVYGAGIQFYEPYPVDGLSEKQKIQLGLVSTVDKKAI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSANGVNPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYSTLLMNLGPENCATLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRNSNWKNLPKKPCKGLINSLGNLHHQLATVRRTALEGLAVEM
TPIEADFTWHKKKTELEMEIQEAFLRFMASILKGYRTYLKPITQAPSEKATAADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTSLAFFDDCIGKLFPSDKGTEKG
TKAEGESSEDTRLMELDESQKSEHTVFVMPPEPPPEDGPDPPPKYSYKNFPSLRLELFDR
PQELRPALSTRAAGASMSSSPALLAKRTKQEIKMAYKLAKRFYSNPPQWAKCLFSHCYSL
WFICLPASMRTAQSKSRTMQQAFNVLLKMRSSEVEVLDEVCYRVVMQLCGLWEMPVMAVR
VLMEMKKAGVVPNAITYGYYNKAVLESPWPSRNRSGLFMWTKMRNLVRGVVQFKQALRRT
ALKGGPSLITTELSAGTAAGADGDRLSHGSIDSSNEPIVEEHMLFPHSLIAEDAIDSHYS
TAGQSDQGYGSKNELAQDLTDESITSPPLFTNHTSSSKATKIQSGDDVASSVDSVVAVTE
PSSPAEIAPSVASIVKLSTEIPVHIDSTADRGETAGVCTAKLFIPRKKSEDLALPVEDDS
VITVSQLSQAGQQQRMKAFVERSCSFSAESKAGMLQKKGSLELSADHMGADAKILASAFS
GSLTPPPFTTITPFKEGKMESTTSSALQQEHEDKQKEHISFSSAEEKVGKIIEQKDSVDT
PQGSEVVSRSISSGSSSSKTVEREDVEVGADPLSLFASETEDATSIQSQESTRPFPPMVS
RNLADEIEMYMSLQSPLNSKSSSMELQQGSNHTSVNCPDSPEIKQSLERRSSLPIGPVKT
PSLTETPKRSPAVTRSKTFAVKSPKTPGSAGQRSSSLTALVKSSQSSSLGSVINSISGIK
MDSLLLGPKVDMLKSGMKQAANVASKMWDAVASAYSYSDDEEESSQPRDSFPARLEEQLL
SAEGATENTLPRGLMPSLASNGLTHSNTSLGSSSGSSDTSRAQLLTPLTPGRSKRGADSE
RSEHSSSHHASTSSIYQNCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNCTCPF
CQMTFLPLLHVEFHDLRSTPGFYLKTSTSGDSINSSSTHPATSGSSEVKEGCSSDPPDLM
NFPESPEDSKGPVEMPVIQTGTPKILVPEPAHSDPLGLMERRNTLTRSNSVGGPLQSLDS
SHRPNHGISTTSLPNSLQEVADTLSQKRPNPKPVSVPYLGPLVLRKELESLLENEGDQVI
YTHKFLSQHPIIFWNLVWYFRRLDLPSVLPGLILTSEHCNNGVQLPQTSLSQDSKLVYVQ
LLWDNVNLHQEPTEPLYQLWRTFLQKKGTLAPTDHQETRTLLNSIVRSIQTNDVYGPINM
LLREIKKRPEVKRQRSIYREMLFLSLVALGRENIDIEAFNREYQLAYNELSTEQLKVLSP
IDRPHSNSVQWCLKCFGALFI
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgtgtgacagactactttgttgtggccggcctgacagac
aagtccacaccactagagcaggatctatctgaagctaagtccagtgggcccaaggcaccc
atcactgaccttgccgtcatcaacaagtctgcaggagaaacggtgcctgaaggtttcact
tgcattgagagtacctacagtggtcagccagccaatctcaaccatggcagtctcaagagc
ccagaactctttctgtgttacaagaggagtcgtgggaagcccccactcattgacatcggg
gtcctatatgagggaaaagagcgtctcattcagggttgtgagatcattgaagctacacca
tttggccgctgtgcaaatgtaaacaacagctctgccacatcccagcgaatattcatcaca
tatcgccgcgcaccccccgtccagccccagaactcactggctgtgactgacatctgcgtc
atcatcacaaacaagaatgagactcctcctcacactttctgtaaagttgacaagaaccta
aactgtggcttgtggggatcgagtgtatttttgtgttacaagaagtcagtgtctgcgtcc
aactccattgcttataaggctggtctgatctttcgctatcctgaggaggactatgaatca
tttcccctctctgagtctgtacccctattctgccttcctatgggggccaagattgagtgc
tgggctcctaacacacgctaccctttacctgtcttctccacatttgtcctcaccaactcc
aatggagaaaaggtgtatggagctgggatacagttctacgaaccgtatcctgtggacggt
ctcagcgagaaacaaaagatccagctaggtctggtctccactgtggacaagaaggccata
cccaaccgcacagtcaacaccaacaagtgcatctgtctgctgtcccgctggcctttcttt
gagtccttcaggaagttcctaatgttcctttacaagctgtcagccaatggagtcaaccct
ctgcccattgagaaacacatatcccatttcatgcacaatgtctccttcccttctcctcag
aggccaagaatactggtccagctgtcggcacatgacaccttaatcctgtcccaacctgtc
tgtacacctttaccactaagtggagcagactacagtacactgctgatgaatctgggccca
gaaaattgtgccacactgcttcactttatcctgctggaaagcaagatcctgttgcactcc
ctgagaccagctgtactgactggggtggctgaggctgttgtggcgatgatcttcccattc
cagtggcagtgtccatatatccctctttgccctctgtctctggcgggggtcctcaatgca
ccatgtcccttcattgtgggcgttgactctagatactttgacctctacgatcccccacct
gatgtggtctgtgtggacttggacaccaacactatatacttgtctgatgaaaaaagaaat
agtaactggaagaacctcccaaagaagccgtgcaaaggtctcatcaactccttaggaaat
cttcaccaccagcttgccactgttcggcgtacagcactagaaggcttggcagtggagatg
acccctatcgaggcagacttcacctggcataagaaaaagacagagctggagatggagatt
caggaggcgttcctgcgctttatggcatccatactgaagggctaccgaacctacctcaaa
ccaatcacacaagcaccttctgagaaagctactgctgcagactcgctctatgacctgcaa
ggattcttaaagagtagagatcgtgcacatcagaaattctactctcagctcaccaagact
cagatcttcatccgcttcattgaggaatgtacttttgttagtgacaaagacaccagcttg
gctttctttgatgactgcattggaaaactttttccttccgacaaaggaacagaaaagggt
acaaaggctgaaggtgagtcatctgaggacaccaggctgatggaactggatgagtcacag
aagagtgagcacacagtcttcgtcatgcctccggaaccacccccagaagatggtcctgac
ccccctcccaaatatagttataagaatttccctagtttacgtttggagctgtttgatcgt
ccacaagagctgagaccagcactgagcacaagagcagcaggggccagtatgtccagcagc
cctgccctgttagccaagagaaccaaacaggaaatcaaaatggcctacaagctggcaaag
cgtttctattccaatcctccccagtgggcaaagtgtctgtttagtcactgctacagtctg
tggttcatctgtcttcctgccagtatgcgtactgcccaatccaaatcccgcaccatgcag
caggccttcaatgttctgctcaagatgaggagctctgaggtggaggtgcttgatgaggtg
tgttaccgtgtggtgatgcagttgtgtggtctgtgggagatgcctgtcatggctgtgcgt
gtcttaatggagatgaaaaaggctggtgttgtaccaaatgctattacttacggatactac
aacaaggctgtccttgaaagtccttggccaagtcgtaaccgtagcggactcttcatgtgg
accaaaatgcggaacctggtgcgtggagtggtgcagtttaagcaggcgttgcgtagaaca
gcacttaaaggaggaccttctctgataaccacagagctttcagcgggtacagcagcaggt
gctgatggagacagactgagtcatggcagtatagacagctcaaatgagcctattgtagag
gaacacatgcttttccctcacagccttatagctgaggacgctattgacagtcactatagt
acagctggtcagtctgatcagggttatggatctaagaacgagctggcccaggaccttact
gatgaatctataacttctccacctctcttcaccaaccacactagcagtagcaaagcaacc
aagatccaaagtggggatgatgttgctagttctgtagacagtgttgtagctgtgacagag
ccctccagccctgctgagatagcaccttctgtagccagcattgttaaactgtctactgag
atccctgtccatattgacagcactgcagacaggggagaaactgcaggtgtgtgtacagct
aagctcttcattccccgtaagaagagtgaagatctggccctgcctgtggaagatgactct
gtaatcacagtttcacaactttcacaggctggacagcaacaaaggatgaaagcctttgtg
gagcgcagctgcagtttcagcgcagagagcaaagctggcatgctacaaaagaagggcagt
ctggagctcagtgctgatcacatgggtgcagatgcaaaaatccttgcatccgcattctcc
ggcagtcttacgcctcctccatttacaaccatcactccctttaaagagggtaagatggag
tctacaacgagttctgccctccagcaggaacatgaagataagcagaaggaacacatatca
ttcagttctgcggaagagaaagtgggtaaaattatagagcagaaagattcagtagacaca
ccccaagggagcgaagttgttagccgaagcataagcagtggttcttcctcctctaaaact
gtggaaagggaggatgttgaggtgggggcggatcctctttcactctttgcatcagaaact
gaggatgcaacctccattcagagccaggagtccacacggccctttccacctatggtgtca
agaaatcttgcagatgagattgagatgtacatgagcctccagagccccttgaatagtaaa
tcttccagcatggagttgcagcagggatcaaaccacacatcagttaactgtccagactct
cctgaaataaagcagtctttggaaagaagatcgagccttccgatcggtccagtcaaaact
cctagtttaacagagactccgaagcgtagccccgctgtcacacgctctaagacatttgca
gtcaaatcccccaagacaccaggctctgcaggtcaaaggtcatcttcgctgactgcgctt
gtaaagtcatcacagagcagttcactgggatccgtcatcaactccatatcaggcatcaag
atggactctctgctgttagggcctaaagtagatatgctcaagtcaggcatgaagcaagca
gccaatgtggccagcaaaatgtgggatgcagtggcctcagcctactcctactcggatgat
gaggaggaaagctcacagccccgagacagtttccctgctaggctagaagagcagttgttg
tctgcagaaggagcaacagagaacactttacccagaggcctgatgcccagcctagcctca
aacgggctcacacacagcaacaccagcctgggcagcagcagtggaagcagcgataccagc
cgagcacagctgttaacacctttgactccaggccgctcaaagagaggtgcagactcagag
aggtctgaacatagttcctctcatcatgccagcacctccagcatttaccagaattgtgct
ttagaggttctaatgtccagctgttctcaatgtcggtcttgtgaagctctggtgtatgac
gaggagatcatggctggctggacagctgatgactccaatctcaactgcacctgtcctttc
tgtcaaatgacttttctccctcttctccatgttgagttccacgacctgcgctccacacca
ggcttctacttaaagacaagcacatcaggagacagtatcaacagctccagcacacatccg
gccacctccggctcctctgaagtgaaagagggttgttctagtgaccctccagacctcatg
aacttcccagaatctcctgaagacagcaagggtcctgttgagatgcctgtcattcaaact
ggaaccccaaaaatccttgtaccagagccagcacattcggaccccctgggtctaatggag
agacgcaacactttaactcggagcaacagcgtgggaggcccgctgcagagtttggactca
tcccacagacccaatcatggcatttccactaccagcctgcccaacagcctacaagaggtg
gcggacaccctcagtcaaaagcggccgaacccaaaaccagtttctgtgccgtatcttggt
ccactggtccttcgcaaagagttggaatcactgttagagaatgagggggatcaggtaatc
tatactcataagttcctcagtcagcaccccatcatcttctggaatctggtgtggtatttt
cgccgtttagacctgccaagtgttctgcctggactcattctcacatctgaacactgcaac
aatggagtgcagctcccacagacatctctgtctcaggacagtaagctggtgtatgtgcag
ctgctgtgggacaatgtcaacttacaccaggagcccacagagcccctctatcagctttgg
aggactttcttgcaaaaaaagggcactctagcccccactgaccaccaggagactcggact
ctgctgaacagcattgtacggagcattcagacgaacgatgtttacggccccatcaacatg
ctccttagggagatcaagaaacgcccagaagttaaacgccagaggagtatctacagggaa
atgctgtttctgtcacttgttgccttaggaagggagaacattgatattgaggcctttaat
cgtgaataccagcttgcatacaatgagctcagcacagaacagctgaaagtcctatccccc
attgacagaccacacagcaacagcgtgcagtggtgcctcaagtgcttcggagccctgttc
atctga
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