Carassius gibelio (silver crucian carp): 127961415
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Entry
127961415 CDS
T08819
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127961415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127961415
03036 Chromosome and associated proteins [BR:
cgib03036
]
127961415
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127961415
Coactivators
SAGA/TFTC/STAGA complex
127961415
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127961415
STAGA complex
127961415
TFTC complex
127961415
SAGA complex
127961415
SLIK complex
127961415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
127961415
NCBI-ProteinID:
XP_052416459
LinkDB
All DBs
Position
B7:complement(6604715..6610134)
Genome browser
AA seq
644 aa
AA seq
DB search
MTEREERRFAEVPRESIKLMAESTGVELSEEVAALLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVHVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLTLAAEGSGAVLPGTTTGAVGFRENSPGLSPPPEPLSEPPLGIA
SHLQAGGAGCPWEEWTPVSLPAMYCELYSFFGDSLAVRFSTDPPLGGTAPPGPCQPLEGR
KEPASSAPNLENTRKMPQLTASMNISPRQDGSPRMEPQPPSLAATVPGRSLARSSSSSSS
SSSVSRSRSSSSRPGRSTSQSRDIFPKARFPLPQAGPPAFSFIIGGRQMGRRCQGRRFQT
SFTPTPPLTTLPPRVYAHKLPVIGRVSKPVRRWTCSHYSLHLPL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaagggaggaacggcgcttcgccgaggtgccccgggaatccatcaaactaatg
gccgagagcaccggagtggagctcagcgaggaggtggcagctctgctggccgaggatgtg
tgctaccgcctcagagaggcaacacagaacagctcacagttcatgagacatgcaaagaga
aggaagctgagtgtggaagacttcaaccgagcgctacggtggagcaatactgagactgtt
tgcggctatggtgcacaagatgccctaccgttccgtccattaaaggaaggagagcttttc
tttgtagaggatcgggagataaatctggtcgagttggcacttgctactaacatccccaaa
ggctgtgcagagacgatggttcgagtgcatgtgtcatatcttgatggaaaaggcaatctg
gaacctcaaggcacagtgcccactgctgttcagtctctatcagaggatctgctgaagtat
taccagcaaataacacgagccattttaggagaggacccacatctcatgaaggtggctttg
ctagacctccagtccaattcaaagatcgccgcactcctgccttactttgtttacgtcatc
agtggggtaaagtcagtaagtcatgatctggaccagttaaatagactcctacacatggtg
aagagtttggtgcagaacccgtacctgtacctgggctcatatgtgcgcagtctggtgtct
agtgtcatgtactgcatcctggagcctctggctgcgtccatcaaccccctcaatgaccac
tggaccctgagagactatgcagcccttctgctcagccacatcttctggacacatggtgat
cttgtgagtgggctgtatcatcagattcttctgtctctgcagaaggttctctccgatccg
gttagacctctctgttcacactatggagctgtagtgggtctgcatgctcttggctggaag
gctgttgaacgtgtgctgtatcctcacctccctgcctactgggcgaatctacaagctgtg
ttagatgattactctgtgtccaacgctcaggtgaaagcagacggccacaaagtctatgga
gccattttggtggcggtagagcgtttgctgaagatgaaggctctcagtctgaccttggca
gcagaaggaagtggtgctgttctaccaggcactaccacaggggctgtcggcttcagagaa
aactcgcctggcctcagcccgcctcccgaacctctttcagaaccccctcttggcattgcg
agccatctccaagcaggtggagctggctgcccatgggaagaatggactcctgtatctctt
cctgccatgtactgtgaactctactccttttttggagacagtctggctgttcgcttcagc
accgacccgccactaggtggcaccgctcctccaggtccctgccaaccactagagggcagg
aaagagccagcaagcagtgccccaaatcttgagaatacccggaaaatgccccagctaact
gccagtatgaatataagcccacgacaggatggaagccctcgtatggaaccacaaccacct
agtctggctgccaccgtcccagggagatctcttgcccgctcctcctcttcttcctcctcc
tcttcttctgtctcacgttccaggtcatcttcgtcacgtcctggacgatcaaccagccaa
tcccgagacattttccctaaagcccgcttcccgctgcctcaggctggacctcctgctttc
tctttcatcattggtgggcggcagatggggcgacgctgtcagggaaggcgcttccagacg
agctttaccccaactccacctcttactaccctcccacctcgtgtttatgcccacaagctg
ccagtcatagggagagtcagcaaacctgtgcgccgctggacgtgttcccattactccctt
cacctgccgctttaa
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