Carassius gibelio (silver crucian carp): 127961415
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Entry
127961415 CDS
T08819
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127961415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127961415
03036 Chromosome and associated proteins [BR:
cgib03036
]
127961415
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127961415
Coactivators
SAGA/TFTC/STAGA complex
127961415
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127961415
STAGA complex
127961415
TFTC complex
127961415
SAGA complex
127961415
SLIK complex
127961415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
127961415
NCBI-ProteinID:
XP_052416459
LinkDB
All DBs
Position
B7:complement(6604715..6610134)
Genome browser
AA seq
644 aa
AA seq
DB search
MTEREERRFAEVPRESIKLMAESTGVELSEEVAALLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVHVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLTLAAEGSGAVLPGTTTGAVGFRENSPGLSPPPEPLSEPPLGIA
SHLQAGGAGCPWEEWTPVSLPAMYCELYSFFGDSLAVRFSTDPPLGGTAPPGPCQPLEGR
KEPASSAPNLENTRKMPQLTASMNISPRQDGSPRMEPQPPSLAATVPGRSLARSSSSSSS
SSSVSRSRSSSSRPGRSTSQSRDIFPKARFPLPQAGPPAFSFIIGGRQMGRRCQGRRFQT
SFTPTPPLTTLPPRVYAHKLPVIGRVSKPVRRWTCSHYSLHLPL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaagggaggaacggcgcttcgccgaggtgccccgggaatccatcaaactaatg
gccgagagcaccggagtggagctcagcgaggaggtggcagctctgctggccgaggatgtg
tgctaccgcctcagagaggcaacacagaacagctcacagttcatgagacatgcaaagaga
aggaagctgagtgtggaagacttcaaccgagcgctacggtggagcaatactgagactgtt
tgcggctatggtgcacaagatgccctaccgttccgtccattaaaggaaggagagcttttc
tttgtagaggatcgggagataaatctggtcgagttggcacttgctactaacatccccaaa
ggctgtgcagagacgatggttcgagtgcatgtgtcatatcttgatggaaaaggcaatctg
gaacctcaaggcacagtgcccactgctgttcagtctctatcagaggatctgctgaagtat
taccagcaaataacacgagccattttaggagaggacccacatctcatgaaggtggctttg
ctagacctccagtccaattcaaagatcgccgcactcctgccttactttgtttacgtcatc
agtggggtaaagtcagtaagtcatgatctggaccagttaaatagactcctacacatggtg
aagagtttggtgcagaacccgtacctgtacctgggctcatatgtgcgcagtctggtgtct
agtgtcatgtactgcatcctggagcctctggctgcgtccatcaaccccctcaatgaccac
tggaccctgagagactatgcagcccttctgctcagccacatcttctggacacatggtgat
cttgtgagtgggctgtatcatcagattcttctgtctctgcagaaggttctctccgatccg
gttagacctctctgttcacactatggagctgtagtgggtctgcatgctcttggctggaag
gctgttgaacgtgtgctgtatcctcacctccctgcctactgggcgaatctacaagctgtg
ttagatgattactctgtgtccaacgctcaggtgaaagcagacggccacaaagtctatgga
gccattttggtggcggtagagcgtttgctgaagatgaaggctctcagtctgaccttggca
gcagaaggaagtggtgctgttctaccaggcactaccacaggggctgtcggcttcagagaa
aactcgcctggcctcagcccgcctcccgaacctctttcagaaccccctcttggcattgcg
agccatctccaagcaggtggagctggctgcccatgggaagaatggactcctgtatctctt
cctgccatgtactgtgaactctactccttttttggagacagtctggctgttcgcttcagc
accgacccgccactaggtggcaccgctcctccaggtccctgccaaccactagagggcagg
aaagagccagcaagcagtgccccaaatcttgagaatacccggaaaatgccccagctaact
gccagtatgaatataagcccacgacaggatggaagccctcgtatggaaccacaaccacct
agtctggctgccaccgtcccagggagatctcttgcccgctcctcctcttcttcctcctcc
tcttcttctgtctcacgttccaggtcatcttcgtcacgtcctggacgatcaaccagccaa
tcccgagacattttccctaaagcccgcttcccgctgcctcaggctggacctcctgctttc
tctttcatcattggtgggcggcagatggggcgacgctgtcagggaaggcgcttccagacg
agctttaccccaactccacctcttactaccctcccacctcgtgtttatgcccacaagctg
ccagtcatagggagagtcagcaaacctgtgcgccgctggacgtgttcccattactccctt
cacctgccgctttaa
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