Carassius gibelio (silver crucian carp): 127961500
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Entry
127961500 CDS
T08819
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04350
TGF-beta signaling pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127961500
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127961500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127961500
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127961500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
NDNF
Ig_5
fn3_2
GH101_dom-5
F5_F8_type_C
Sp38
V-set_CD47
Arylsulfotran_N
TMEM154
LapA_dom
Motif
Other DBs
NCBI-GeneID:
127961500
NCBI-ProteinID:
XP_052416608
LinkDB
All DBs
Position
B7:32652826..32801583
Genome browser
AA seq
1426 aa
AA seq
DB search
MAERGARLLLSLFCLTITVSHAEKGSAVRNFSPFWFSTEPSDTLAVRGAPTLLNCSVHSE
SPAKIEWKKDGSFLSLASDDRRQVLAEGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
ISHTARLSVAGIPRYLSQPEAAFVRVGDSHVLNCEVNPDLVSFIRWEQNKEPVELDQRVF
TLPSGALVISNATEADAGLYRCVIDNAGPTKTSEEAEIQILPESGEERTLEFLLEPQHVS
KAIGESVLLPCVVTGHPTAYITWTHKDQLIEYSKGRFEVLGGGSLRIFNLTEEDAGVYSC
MADNTNGSIEAQTELTLKASPQFLMKPASIYAHEASDIIFECEVAGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQAGAQLIILDQGSRGGAGPTP
SAPRDVVASLVSTRFIKLTWRLPAEPHGDDVTYSVYYSLEGNNRERIVNTSRPGEMQVTI
QNLMPDTKYSFRVVAHNRNGPGESSAPLRVATQPEVQVPGPAPNLQAVVTSPTTVSLRWD
VPLIGNGEIQNYKIYYMEKGMDSEQDLEVNTLSYSMTGLKKFTEYSFRVVAYNKHGPGVS
TEDISVRTYSDVPSAPPQNMTVDVLNSKSIMVRWQPPPADAQNGEITGYKIRYRKGTRKS
EAAEITSGSQLYQLIDGLQRGTEYMLRVSAMTVNGTGPATDWATAETFESDLDETTVPDV
PSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGSPHAKTIKVDYKQRYYTIENLNP
SSHYVITLKAYNNVGEGIPVYESAITRPQSDPIDPDVDLYELFHAPYTPVPDPLPMLPPV
GVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWKTNIPANTKFKVANTTTLTHTVT
GLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFETIPSSAPKDVTVVSKEGRPRTIIVNWQ
PPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQELTLDTAYYFKIQARNSK
GMGPMSDAVQFRTPKAESSDKMANDQAPGILVKPGRPSVQEFGSVGKADVSGTGDNHILV
IVIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAACKSANGSHKYKGNSKDLKPPDLWI
HHERLELKPIDKSPEPNPVMTDTPIPRTSQDISPVDGSMDPMLQRRNSYRGHESEDSMST
LAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHLGNLASPTRSYLHHQSSTRS
IATPISHLDRAESTESVRNTPSVDLHPPSGQPSCTTDLSETDISYHSSAAEEEPAFSTPT
AHVRPTHPLKSFAVPAIPAHPMYDSAALPSTPLLSQTGPHSVKTASIGTLGRTRTPMPVI
VPSAPDVSENSRLHEDAGSNYETDELTEEMAHLEGLMKDLNAITTA
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacagtttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattctggttctccacggagccg
tcggatacgctggcagtgcgaggagcgccgacgctgctcaactgctcagtccacagcgag
tctcctgccaagatcgaatggaagaaagatggctctttcctcagcctggcctcggacgat
cgcaggcaggtcttggccgagggttctctgctcatcagctcagtggtccactcgaaacac
aataaacctgatgagggggtttaccagtgcgtggccactatagacaacctgggcaccatc
ataagtcatacagctagactcagtgttgcagggataccacggtacctcagtcagccggaa
gccgcgtttgtgcgggtgggtgacagtcatgtgctgaactgtgaggtgaatccagacctg
gtgtctttcatccgttgggaacaaaacaaagagccggttgagctggaccagagagtcttc
acgctgcccagtggtgctctcgtcatcagtaacgccacagaggcagacgcaggcctgtac
cgctgcgtgatcgacaacgctgggcccaccaagaccagtgaggaagcagaaatacagata
ctgcctgaatcaggggaggaaaggacactagagtttctcctggagcctcagcatgtgtct
aaagccattggggagagtgtgctgctcccctgtgtggtgacgggacatcccacagcctac
atcacatggacgcacaaagaccagctcattgagtacagcaagggccgctttgaagtgctt
ggaggaggcagcctgcggatcttcaatctcactgaggaagacgccggtgtgtatagctgc
atggcagacaacaccaatggatccattgaggcccagactgagctcacactgaaggcttcc
ccacagttcctgatgaaaccagctagcatatatgctcatgaagcctcagacatcatcttc
gagtgcgaggtcgccggctcacccgctcccaccatcaaatgggtgaagaacggggatgcc
gtcattcccagcgactatttcaagatcattaaggagcagaacttgcaggtgctggggctg
gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgatgctggcaatgtccag
gcaggtgctcagctcatcatattggatcaaggctccagaggcggcgctggtcccacgccc
tccgccccccgtgacgttgtggcatccctggtctccacccgcttcatcaagctgacctgg
cgccttcctgctgaaccgcatggagatgatgtcacctactcggtctactacagcctggag
ggcaataacagggagaggatagtgaacaccagtcgtccaggagaaatgcaagtcaccatt
cagaacctcatgccagacaccaagtactccttccgcgtggtggcccacaacagaaacggc
cctggagagagctcagcgcccctgagggtcgccacccagcccgaagtccaggtacctggt
cctgctccaaacctacaggcagtggtcacatcccccaccacagtgagtctcagatgggac
gtgcccctcataggcaatggcgagatccagaactacaaaatttactacatggagaagggc
atggacagtgagcaggatctggaggtgaacacactgtcctacagcatgactggactgaag
aagttcacagagtacagtttcagagtggtggcctataacaaacatggacctggagtgtcc
actgaggacatatctgtgcgcacatactctgatgtccccagtgctccgccacagaacatg
acggttgatgtgctgaactcgaagagcatcatggtcagatggcagcctcctccagcagat
gcccagaatggtgagatcaccggctataagatccgctacaggaagggtacgaggaagagc
gaggcggccgagatcacatcaggatcacagctttatcagctcatagatggtctgcagcga
ggcactgaatatatgttgcgagtgtcggccatgacggtcaacggcacgggtccggccaca
gactgggccactgctgagacgtttgagagcgatctggatgagacaactgtgccagatgtc
ccaagctccttgcatgtgcggccacttgtgaacagcattgtagtgagctggacgcccccg
gagaaccaggacattgtggtgaggggttactccatcggctatgggatcggcagccctcac
gccaagaccattaaagtggactacaaacagagatactacaccattgagaacttgaatccc
agctcgcactacgttatcacactgaaggcctacaacaacgtgggggagggaatccctgtg
tacgagagcgctatcacacgaccccaatcagaccccatagaccctgatgttgatttatac
gaacttttccatgctccatacactccagtaccagaccctttacccatgctgcctccagtg
ggcgttcaggcgtccgttctgagccacgacacaatcaaagtcacctgggcggacaactcg
ctacccaagaaccagaagatcacagatgcacgttactacaccgtgcgctggaagaccaac
atacctgcaaacacaaagttcaaggtggctaataccaccacactaactcacacagtgacg
ggtcttaaacccaacaccttgtacgagttctcggtcatggtgaccaagggccggaggacc
agcacctggagcatgactgcacatggaacaacatttgaaacaatcccaagttctgctcct
aaagatgtgactgtggtgagtaaagagggacgaccacgaaccatcatcgtcaactggcag
ccaccctcagaagccaatggcaagatcacaggttacatcatttactacagcactgatgtg
aatgcagaggttcatgactgggtcattgagccagtagtggggaacaggctaacccatcag
attcaagagctgacccttgataccgcctactacttcaagatccaggcgcgtaactctaaa
gggatgggtcccatgtctgatgctgtccagttccgcactcctaaagccgaatcctctgac
aaaatggctaatgaccaagctccaggtatattggtgaaaccaggaagaccctctgtacaa
gaatttggatcagttgggaaagcagatgtgtctggcactggtgataaccacattctggtt
attgtcataattgtgtctgtgggtgcatttaccatcatcctggtggtggttggcgccttc
ctgtgtacacgccgtaccacaacacagcagaaaaagaaacgagcagcctgcaagtctgcc
aatggatcccacaagtataaaggcaattccaaagatctgaagccaccagacctctggatc
caccacgaacgtttggagctaaaacctatcgacaaatcacctgaacccaatccagtcatg
accgacacgccaatccccagaacctcccaggacatctccccagtggacggctccatggat
cctatgctccagagacgtaactcttaccgtggccatgaatcagaggacagcatgtctaca
ctggctggccgtcggggaatgagacctaaaatgatgatgccctttgatgcacaaccccct
cagcctgtgattagtgctcaccccatccattccctcgataaccatcaccatcattatcac
ttgggtaacctggcctcgccaacacgcagctatctccaccaccagagcagcacacggtcc
atcgccacccccatctctcatctagacagggcagagtccacagagtcagtaaggaacacc
cctagtgttgacttgcaccctccatctgggcagccctcctgcaccactgacctttcagag
acagacattagctaccacagttcagccgctgaggaggagccagcattcagtacacccaca
gcacacgttcgtcccacacacccactcaagagttttgcagtgcctgccatcccagctcac
cccatgtatgactcagcagcattacccagcactccactgctgtctcagacagggcctcac
tcagttaaaacagcctctattggtacgttgggaaggacgagaactcctatgcctgtcata
gttccaagtgcaccggatgtctcggaaaatagcagactgcatgaagatgcagggagcaat
tacgagactgacgagttgacggaggaaatggcccatctggaggggttaatgaaggaccta
aacgccatcacgacagcctga
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integrated database retrieval system