KEGG   Carassius gibelio (silver crucian carp): 127961500
Entry
127961500         CDS       T08819                                 
Name
(RefSeq) neogenin 1a isoform X1
  KO
K06766  neogenin
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04350  TGF-beta signaling pathway
cgib04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    127961500
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127961500
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgib04515]
    127961500
Cell adhesion molecules [BR:cgib04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   127961500
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set NDNF Ig_5 fn3_2 GH101_dom-5 F5_F8_type_C Sp38 V-set_CD47 Arylsulfotran_N TMEM154 LapA_dom
Other DBs
NCBI-GeneID: 127961500
NCBI-ProteinID: XP_052416608
LinkDB
Position
B7:32652826..32801583
AA seq 1426 aa
MAERGARLLLSLFCLTITVSHAEKGSAVRNFSPFWFSTEPSDTLAVRGAPTLLNCSVHSE
SPAKIEWKKDGSFLSLASDDRRQVLAEGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI
ISHTARLSVAGIPRYLSQPEAAFVRVGDSHVLNCEVNPDLVSFIRWEQNKEPVELDQRVF
TLPSGALVISNATEADAGLYRCVIDNAGPTKTSEEAEIQILPESGEERTLEFLLEPQHVS
KAIGESVLLPCVVTGHPTAYITWTHKDQLIEYSKGRFEVLGGGSLRIFNLTEEDAGVYSC
MADNTNGSIEAQTELTLKASPQFLMKPASIYAHEASDIIFECEVAGSPAPTIKWVKNGDA
VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQAGAQLIILDQGSRGGAGPTP
SAPRDVVASLVSTRFIKLTWRLPAEPHGDDVTYSVYYSLEGNNRERIVNTSRPGEMQVTI
QNLMPDTKYSFRVVAHNRNGPGESSAPLRVATQPEVQVPGPAPNLQAVVTSPTTVSLRWD
VPLIGNGEIQNYKIYYMEKGMDSEQDLEVNTLSYSMTGLKKFTEYSFRVVAYNKHGPGVS
TEDISVRTYSDVPSAPPQNMTVDVLNSKSIMVRWQPPPADAQNGEITGYKIRYRKGTRKS
EAAEITSGSQLYQLIDGLQRGTEYMLRVSAMTVNGTGPATDWATAETFESDLDETTVPDV
PSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGSPHAKTIKVDYKQRYYTIENLNP
SSHYVITLKAYNNVGEGIPVYESAITRPQSDPIDPDVDLYELFHAPYTPVPDPLPMLPPV
GVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWKTNIPANTKFKVANTTTLTHTVT
GLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFETIPSSAPKDVTVVSKEGRPRTIIVNWQ
PPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQELTLDTAYYFKIQARNSK
GMGPMSDAVQFRTPKAESSDKMANDQAPGILVKPGRPSVQEFGSVGKADVSGTGDNHILV
IVIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAACKSANGSHKYKGNSKDLKPPDLWI
HHERLELKPIDKSPEPNPVMTDTPIPRTSQDISPVDGSMDPMLQRRNSYRGHESEDSMST
LAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHLGNLASPTRSYLHHQSSTRS
IATPISHLDRAESTESVRNTPSVDLHPPSGQPSCTTDLSETDISYHSSAAEEEPAFSTPT
AHVRPTHPLKSFAVPAIPAHPMYDSAALPSTPLLSQTGPHSVKTASIGTLGRTRTPMPVI
VPSAPDVSENSRLHEDAGSNYETDELTEEMAHLEGLMKDLNAITTA
NT seq 4281 nt   +upstreamnt  +downstreamnt
atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacagtttca
catgctgaaaaaggatcagcagtgaggaacttcagcccattctggttctccacggagccg
tcggatacgctggcagtgcgaggagcgccgacgctgctcaactgctcagtccacagcgag
tctcctgccaagatcgaatggaagaaagatggctctttcctcagcctggcctcggacgat
cgcaggcaggtcttggccgagggttctctgctcatcagctcagtggtccactcgaaacac
aataaacctgatgagggggtttaccagtgcgtggccactatagacaacctgggcaccatc
ataagtcatacagctagactcagtgttgcagggataccacggtacctcagtcagccggaa
gccgcgtttgtgcgggtgggtgacagtcatgtgctgaactgtgaggtgaatccagacctg
gtgtctttcatccgttgggaacaaaacaaagagccggttgagctggaccagagagtcttc
acgctgcccagtggtgctctcgtcatcagtaacgccacagaggcagacgcaggcctgtac
cgctgcgtgatcgacaacgctgggcccaccaagaccagtgaggaagcagaaatacagata
ctgcctgaatcaggggaggaaaggacactagagtttctcctggagcctcagcatgtgtct
aaagccattggggagagtgtgctgctcccctgtgtggtgacgggacatcccacagcctac
atcacatggacgcacaaagaccagctcattgagtacagcaagggccgctttgaagtgctt
ggaggaggcagcctgcggatcttcaatctcactgaggaagacgccggtgtgtatagctgc
atggcagacaacaccaatggatccattgaggcccagactgagctcacactgaaggcttcc
ccacagttcctgatgaaaccagctagcatatatgctcatgaagcctcagacatcatcttc
gagtgcgaggtcgccggctcacccgctcccaccatcaaatgggtgaagaacggggatgcc
gtcattcccagcgactatttcaagatcattaaggagcagaacttgcaggtgctggggctg
gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgatgctggcaatgtccag
gcaggtgctcagctcatcatattggatcaaggctccagaggcggcgctggtcccacgccc
tccgccccccgtgacgttgtggcatccctggtctccacccgcttcatcaagctgacctgg
cgccttcctgctgaaccgcatggagatgatgtcacctactcggtctactacagcctggag
ggcaataacagggagaggatagtgaacaccagtcgtccaggagaaatgcaagtcaccatt
cagaacctcatgccagacaccaagtactccttccgcgtggtggcccacaacagaaacggc
cctggagagagctcagcgcccctgagggtcgccacccagcccgaagtccaggtacctggt
cctgctccaaacctacaggcagtggtcacatcccccaccacagtgagtctcagatgggac
gtgcccctcataggcaatggcgagatccagaactacaaaatttactacatggagaagggc
atggacagtgagcaggatctggaggtgaacacactgtcctacagcatgactggactgaag
aagttcacagagtacagtttcagagtggtggcctataacaaacatggacctggagtgtcc
actgaggacatatctgtgcgcacatactctgatgtccccagtgctccgccacagaacatg
acggttgatgtgctgaactcgaagagcatcatggtcagatggcagcctcctccagcagat
gcccagaatggtgagatcaccggctataagatccgctacaggaagggtacgaggaagagc
gaggcggccgagatcacatcaggatcacagctttatcagctcatagatggtctgcagcga
ggcactgaatatatgttgcgagtgtcggccatgacggtcaacggcacgggtccggccaca
gactgggccactgctgagacgtttgagagcgatctggatgagacaactgtgccagatgtc
ccaagctccttgcatgtgcggccacttgtgaacagcattgtagtgagctggacgcccccg
gagaaccaggacattgtggtgaggggttactccatcggctatgggatcggcagccctcac
gccaagaccattaaagtggactacaaacagagatactacaccattgagaacttgaatccc
agctcgcactacgttatcacactgaaggcctacaacaacgtgggggagggaatccctgtg
tacgagagcgctatcacacgaccccaatcagaccccatagaccctgatgttgatttatac
gaacttttccatgctccatacactccagtaccagaccctttacccatgctgcctccagtg
ggcgttcaggcgtccgttctgagccacgacacaatcaaagtcacctgggcggacaactcg
ctacccaagaaccagaagatcacagatgcacgttactacaccgtgcgctggaagaccaac
atacctgcaaacacaaagttcaaggtggctaataccaccacactaactcacacagtgacg
ggtcttaaacccaacaccttgtacgagttctcggtcatggtgaccaagggccggaggacc
agcacctggagcatgactgcacatggaacaacatttgaaacaatcccaagttctgctcct
aaagatgtgactgtggtgagtaaagagggacgaccacgaaccatcatcgtcaactggcag
ccaccctcagaagccaatggcaagatcacaggttacatcatttactacagcactgatgtg
aatgcagaggttcatgactgggtcattgagccagtagtggggaacaggctaacccatcag
attcaagagctgacccttgataccgcctactacttcaagatccaggcgcgtaactctaaa
gggatgggtcccatgtctgatgctgtccagttccgcactcctaaagccgaatcctctgac
aaaatggctaatgaccaagctccaggtatattggtgaaaccaggaagaccctctgtacaa
gaatttggatcagttgggaaagcagatgtgtctggcactggtgataaccacattctggtt
attgtcataattgtgtctgtgggtgcatttaccatcatcctggtggtggttggcgccttc
ctgtgtacacgccgtaccacaacacagcagaaaaagaaacgagcagcctgcaagtctgcc
aatggatcccacaagtataaaggcaattccaaagatctgaagccaccagacctctggatc
caccacgaacgtttggagctaaaacctatcgacaaatcacctgaacccaatccagtcatg
accgacacgccaatccccagaacctcccaggacatctccccagtggacggctccatggat
cctatgctccagagacgtaactcttaccgtggccatgaatcagaggacagcatgtctaca
ctggctggccgtcggggaatgagacctaaaatgatgatgccctttgatgcacaaccccct
cagcctgtgattagtgctcaccccatccattccctcgataaccatcaccatcattatcac
ttgggtaacctggcctcgccaacacgcagctatctccaccaccagagcagcacacggtcc
atcgccacccccatctctcatctagacagggcagagtccacagagtcagtaaggaacacc
cctagtgttgacttgcaccctccatctgggcagccctcctgcaccactgacctttcagag
acagacattagctaccacagttcagccgctgaggaggagccagcattcagtacacccaca
gcacacgttcgtcccacacacccactcaagagttttgcagtgcctgccatcccagctcac
cccatgtatgactcagcagcattacccagcactccactgctgtctcagacagggcctcac
tcagttaaaacagcctctattggtacgttgggaaggacgagaactcctatgcctgtcata
gttccaagtgcaccggatgtctcggaaaatagcagactgcatgaagatgcagggagcaat
tacgagactgacgagttgacggaggaaatggcccatctggaggggttaatgaaggaccta
aacgccatcacgacagcctga

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