Carassius gibelio (silver crucian carp): 127961558
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Entry
127961558 CDS
T08819
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1A isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04137
Mitophagy - animal
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127961558
04137 Mitophagy - animal
127961558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127961558
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127961558
Membrane trafficking [BR:
cgib04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
127961558
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
127961558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
eIF2A
Motif
Other DBs
NCBI-GeneID:
127961558
NCBI-ProteinID:
XP_052416702
LinkDB
All DBs
Position
B7:complement(19184162..19254548)
Genome browser
AA seq
1365 aa
AA seq
DB search
MKVGQKNSVCILSSRERGARGLASHRILLQLVEEKTQRMKWQSQKVEFPDSPRSTFLLAF
SPDRSLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCLTFHPSIPGLIASGCLDGEVR
IWDLHGGSESWLTESNSAIASLAFHPTAQLLLIATNNELHLWDWSRKEPFAVLKTASETE
RVRLVRFDPLGHYLLTAIVNPSNQQNDDDPEIPMDSVEMPHLRQRSFLQSQPVRRTPILH
NFLHILTSRNSGPQAGGTLASSSDEASDSPGPYAVLRDRSRLPYHGCVQPLGVVCFCSRC
SSTRVPSPPDEDSSDSSSLEGQSHASTFSSARTEPRIPRPPTEPYASNRPSAFNCVYGGR
NNLRNISSSSGRRGVPGMTPIPPFRQHPPSREDGGRLPGADWVGCVLNGRGSTVTPPRTS
ASSVSLLSVLRQQGTPSQSPVYTSASDGWGLPRSSSSSTSGTSSSRHRPPEEEGHSSPSS
IRSVLQCNLNRYFMEYDRMQDLVRPQEGNRQDQQTQEILNNNMDPEQPGPSHYQPPYGGE
NPSQSHMNRCRVCHNLFTYNQGTRRWERTGQHTSAERNAAWQPTSPALHSVAPVSHSDHD
LLEHRPMEPSPDAQEPHVPFSRSTVTGQHEEQAVGLVYNQETGQLERVYRQSATSRSTNV
PQEALNQEMPEDLPDDDYLRRRLLESSMTSLSRYDVSGSRDHPIYPDPARLSPAAFYAQR
MIQYLSRRDSVRQRSLRPPSRPRPLSSNPSSLSPGPGPSVESNEVDFEEFEDSGSRHRAP
RNARMSAPSLGRFVPRRFLLPEFLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAV
ASNIANTTYRLQWWDFTKYDLPEISNASVNVLVPNCKIYNDASCDISADGQLLAVFIPSS
QRGFPDEGILAVYSLAPHNLGEMLYSKRFGPNAISVSLSPMGRYVMVGLASRRILLHQVT
DHMVAQVFRLQQPHGGETSMRRVFDVVYPMAPDQRRHISINSARWLPEPGLGLAYGTNKG
DLVICRPVDVHSDSNGTSEHSERIYTINNGGGTGATSSSRAGDRAGNSRTDWRSQREMGL
MNAVGLQPRHPAPTVTSQGTQTQTLRSQNAETQTERELPDEPQLPSTSQGSQVTDAADSL
DLEILPEDSGSEVVPETPPHSRPQEDEESDLTEPSTDSTGQAEYASHIRRLMAEGGMTAV
VQREQSTTMASMGSFGNNIIVSHRIHRGSQTGADAQRQTGLSPAPGPSSTAPESSYSRIL
SSTLGLHPDTAQGTSTDMDLTSLIEQERLHTSLLSQEFSPVFSSALEANGPSPSVETDSV
LEEEELQDYASLPASLLSSSPSLSPVNNSNYSNSDSSYHGDEYGR
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgggacagaagaactcagtatgtatcctgtcaagtcgagagcgaggagcacga
ggccttgcctcacacaggatcctcctgcagcttgtggaggagaagacacagcgcatgaaa
tggcaaagccagaaagtggagtttccagacagccctcgctcaacctttcttctggccttc
agtccagataggtctttaatggcctcgacccatgtgaaccacaacatctacatcacagag
gttaagacaggaaagtgtgttcactctctagtgggtcaccgccggacaccctggtgcctg
acctttcaccctagcatccctggccttattgcttctggctgcctggatggagaggtccga
atctgggacctgcatggaggcagtgagagctggctcacagagagtaactcagcaattgca
tcccttgctttccatcctactgctcagctgctgctcattgccactaacaatgagctacat
ctgtgggactggagtcggaaggagccctttgctgtgttgaagactgctagtgagacagag
agagtcaggttggtgagatttgatccgttgggtcactatcttctaactgccattgtaaac
ccttcaaaccaacagaatgatgacgatcctgagatcccaatggacagtgtggagatgcct
catctccgtcagcgctctttcctgcagtcccagcccgtgagacgcacacccatcttgcac
aattttttgcatatcctcacttctcgcaactccggccctcaggctggaggcactctcgct
tcttccagtgatgaggcgtctgattcgcctgggccttacgctgttttgagggatcgatcc
cggctgccgtaccatggttgtgttcagccactcggagtagtgtgtttctgtagccgttgc
tcatcaacacgggttccgtctccaccggacgaggactcttcagactcctcatccctggag
ggacagtcacacgcatccaccttttcttctgcacgcaccgaaccccggataccacggcct
cccactgagccttatgcttcaaatcggccctcagcatttaactgcgtgtatggaggcagg
aacaacttgcggaacatttcttctagctctgggaggaggggagtgcctggaatgacaccc
atcccacctttccggcagcatccaccaagcagggaagatgggggccgtctccctggggca
gactgggtaggctgtgtgctaaatggacgaggtagtactgtgactccacccagaaccagc
gcttcctccgtcagcctgctttctgtcctgcgacagcaagggactcctagccagtcacct
gtttacacctcagctagtgatggatggggccttcctcgaagcagcagcagcagcacatca
ggaactagttctagcaggcatcgcccacctgaggaagagggccacagcagcccttcttcc
atccgcagtgttcttcagtgtaaccttaaccgctatttcatggagtatgatcgaatgcag
gaccttgtgcggcctcaagagggcaacaggcaggaccagcagactcaggaaatacttaat
aacaatatggacccagagcaaccaggtccatctcattaccagcctccctacggtggcgaa
aacccttctcagagtcacatgaaccgctgtagagtctgtcacaaccttttcacctacaat
cagggcaccaggcgctgggagagaacaggtcagcatacatctgctgagagaaatgcagct
tggcaacctacaagtcctgccttgcacagtgtagccccggtctctcattctgatcatgac
ctacttgaacacaggcccatggagcccagcccagacgcccaagagcctcatgttcccttt
tcccgcagcacagttactggtcagcacgaggagcaggccgtcgggctggtctacaaccag
gaaactggacaactggagcgtgtttacaggcagtccgccacctctcgctcgacaaatgta
ccacaagaagccttaaaccaggaaatgcctgaagacttgccggatgacgattacttgcgc
aggaggctgctggagtcgtccatgacgtctctttccagatacgatgtctctggatcacga
gaccaccctatctatcccgatccggccaggttgtcccctgcagcattttacgcacaacgt
atgatccagtatctgtctcggcgtgacagcgttcgccagcgctctctgcgcccccccagc
agaccccgacccctgtcctccaatcccagcagcctctcccctggccctggccccagtgtg
gagagcaacgaagttgactttgaggagttcgaggacagtggaagcagacatagggctcct
cgtaatgcacgcatgtctgccccctcccttggtcgctttgtgcccaggcggttcctgctg
ccggagtttttaccgtatgctggaatcttccatgagcgagggcagccgggcctggcaaca
cactcatccgtcaatagggtcctcgcaggtgctgtaattggggacggtcaatctgcagtg
gccagcaacatagctaacacaacgtatcgtctccagtggtgggacttcaccaaatatgac
ttgcctgagatcagtaatgcatcggtgaatgtgttggtgcccaactgtaagatctacaat
gatgcgagctgtgacatctcagcagacgggcagctgctggctgtgttcattcccagcagt
caaaggggttttcctgatgagggcatcttggctgtgtactccctggccccacacaacctg
ggagagatgctctactccaagagatttggtccaaacgccatctctgtcagtttgtctccg
atgggtcgttacgtgatggtgggtctggcgtctcgccgcatcctgctgcatcaggtcacc
gatcacatggtggcacaggtcttcagactgcagcagccccacggaggagagacgtccatg
aggagggtgtttgatgtggtgtatccaatggccccagaccagaggagacacatcagtata
aattctgcacgttggctgccagaaccggggcttgggcttgcttatggaaccaacaaagga
gatctggtcatctgcagacctgttgatgtacactcagatagcaacggcacttctgaacac
tctgagagaatatacaccatcaacaatggtggagggactggtgcaaccagtagcagcagg
gctggagacagagcagggaacagcaggactgattggaggtcccagagagagatgggtctg
atgaatgcagtcggtctgcagccacgacatcctgcccctactgttacatcacaggggacg
cagacacagactctgcgctcacagaatgcagagacacaaacagaacgtgagcttccagat
gaacctcagctgcccagcacttctcaggggtcacaggttactgatgccgcagacagcttg
gatttagagattctcccagaggattctgggtctgaggtggtgccagagacgcccccccac
agtcgacctcaggaagacgaagagtcagatctcactgaacccagcacagacagcacaggt
caggctgagtatgcgtctcatatccgaaggctaatggctgagggagggatgacagcggtg
gtccagcgtgaacagagcaccacaatggcttccatgggcagctttggcaacaacatcatc
gttagccaccgaatccaccgtggctcccagacaggagcggatgcacaaagacaaactggt
ttgagccccgcccccgggccctcctctactgctcctgagagttcgtactcccgcatcctc
tccagcacgctggggcttcatcccgacaccgctcagggcacctctacagacatggaccta
acgtccctcatagaacaggaaagacttcacacgtccctcctttcacaggagttttcacct
gttttctcatctgctctagaagcaaatggaccttccccttctgtggaaacagacagtgtc
ttggaggaagaggagctccaagactatgcatccctccctgcgtctttactctcatcctca
ccctctctttctccagtcaataacagtaactacagcaacagcgatagtagttatcacgga
gacgaatatgggcgataa
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integrated database retrieval system
