Carassius gibelio (silver crucian carp): 127961586
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Entry
127961586 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04217
Necroptosis
cgib04622
RIG-I-like receptor signaling pathway
cgib04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127961586
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127961586
04625 C-type lectin receptor signaling pathway
127961586
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127961586
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127961586
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127961586
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C67
127961586
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127961586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
127961586
NCBI-ProteinID:
XP_052416722
LinkDB
All DBs
Position
B7:complement(18126954..18147982)
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AA seq
948 aa
AA seq
DB search
MSSALWSQEKPAGSFRDDWHFYIVVMECTVEKPGQKTLRIPRGSLGQACQERNSLGRTIP
PSKGKRSLRILDQTNVVVSVDERDVMELEEKLAELLFPITNCEERYSLLCNRARLDRARD
INCGAKVRVQLRSGDEPLPGVVRFKGPLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDEVERVMLEDNDTEVEGEGAPLEINSRVLVQTRDGPER
GTVIFCDLLPGNESLGYYVGVDMDNPIGDWDGIIDGKQLCNFASLEHTRLVPFCDVMPEY
SMQDQRLPIRSCRAGSDKPGSQSKPKSKGLGLQPGSRSKSEFYYTLNGSSVDHPAQSKAK
GTWYIDEVGEDPAKSLTDTPPDLNPSSSPSRAPPTTSLLSNDNKFHSLPFSLSHKVGSSG
SMSHGPLSLSAGSVMGEQQEVLPPVTTPVQRPPSPPQGQPGLEVGSLVEVKENPPLCGVI
RWVGLPPGLQEPLAGLELEEECVGCTDGTFKGIRYFTCPPKKALFVKLKCCRPDSRFPSL
HHSPNPIERCNSIAFGGYLSEVVNENTPPRTENDGLEVMVGKKKGIQGHYNSCYLDSTLF
CLFSFSSVLDTVLLRPRSKTDVEYYKETQDLLRTEIVNPLRIHGYVCATKIMKLRRILEK
VEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKNDKVLVP
TSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDTPREC
RICGGLALYECRECYEDCDITPGKIKQFCEKCNTQVHLHPRRKSHRYVKLSIPKELQECV
WRQGSYPHQQMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQVSP
CPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgcactatggagccaggaaaagccagcaggcagtttccgagacgactggcac
ttctacattgtggtgatggagtgcactgtggaaaagccaggtcagaagactctgcgcatc
ccacgtggcagccttggccaggcctgccaggagcgcaacagcctgggtcgcacaatcccc
cccagcaagggtaagcgcagcttacgcatcctggaccagactaatgtggtggtgagcgtg
gatgaacgggacgttatggagcttgaggagaagctggcggagctgctgttccccatcacc
aactgcgaagagcgttacagcctgctgtgcaacagagcgcgtctggacagggcccgtgac
atcaactgtggagcaaaagttcgagtgcagctgaggtctggtgacgagcctcttccaggt
gtggtccgctttaaaggacctttgctgcctgacagagcgctgagtggtatctggtttggt
gttgaattactggaggaaggccggggtcaaggttttacggagggctcttatcagggtcag
cagctgtttcgttgtgaagatgaatgcggtgtctttgttgcactggataaacttgagctc
tgggaagatgaggtggaacgtgtgatgctggaggataatgacacggaagtggaaggcgaa
ggagcgccactggagatcaactctcgagtgttggtgcagacacgggatggcccggaacgg
ggcactgttattttctgtgatttactgcctggcaatgagagtcttggatactacgttggt
gttgatatggacaatccaattggagactgggatgggatcatcgacggcaaacagctgtgt
aattttgctagccttgaacacacccgtctcgtccccttctgtgatgtgatgccagaatac
tcgatgcaggatcagaggctgcccatcagaagctgcagggccggcagtgacaaacctggc
agccagagcaaaccaaagagcaaagggttaggcctgcagcctggcagcaggagcaagtct
gagttttattatactctgaatggcagctcggttgatcaccctgctcagtccaaagccaaa
ggcacatggtacatagatgaagtcggcgaagacccggccaaatccctgacagacacgccc
ccagacctcaacccaagctcgtccccttctcgagctccgcccacaacctccttgctgtcc
aatgataacaagttccactccctgcccttcagcttgagccacaaagttggctccagtggg
agcatgagccacggccctctctccctgtccgcgggctcagtgatgggggagcagcaagag
gtcctgccacctgttaccactcctgtccagaggcctccctcaccaccacaaggccagcca
gggttagaggtcgggtcattggtggaggtcaaagagaacccaccgctttgcggggtcatc
cgctgggttggtttacctccaggactacaagagccactagctggactggagctggaggag
gagtgtgtgggctgcactgatggaacgtttaaagggattcgttatttcacgtgtccaccg
aagaaagctctgtttgtcaaactgaagtgctgtagacctgactcacgattcccatcctta
catcattcacccaaccccatagaacgatgcaactccatagcttttgggggttacctaagc
gaagtagttaatgagaacactcctcctcggacagaaaatgacggtttagaggtgatggtg
gggaaaaagaaaggaatacaagggcattacaattcctgctatctggactctactctgttc
tgtcttttctcctttagttctgtgttggatacggtgctcctgaggccaagatctaaaact
gatgtagaatattacaaagagacacaagacttacttcgcacagaaatagtcaacccactt
cgaatacatggctacgtgtgcgccactaaaatcatgaaactcaggaggatattggagaaa
gtggaggcagcgtcaggattcacttcagaagagaaagatcctgaggagttcctcaacatc
ctttttcatcacatcctgagagttgatcctcttctcaaacttcggtctgcaggacagaag
gttcaggactgttacttctatcaaatctttatggataagaacgataaagtgttggtgcca
accagccagcaacttctggagtggtccttcatcaacagtgatctcaaatttgcagaggcc
ccttcttgccttataattcagatgcctcgctttgggaaggactttaagatgtttaataag
atcttcccttctctggagcttgacatcacggatctattagatgacactcctagagaatgt
cgaatttgcggtggcttagctctttatgaatgcagagagtgctacgaagattgtgacatc
acaccaggaaagatcaagcagttctgcgaaaagtgcaatacacaggtacatctgcaccca
cggcgtaagtctcatcgatatgttaagttatctataccgaaagagctgcaggagtgtgtt
tggagacagggatcttaccctcaccagcagatggagctgtttgccgtgctctgcattgag
acgagccactatgttgcctttgtcaaatatggatctgcagactcggcctggctgttcttt
gatagtatggctgaccgcgacggcggtcagaacgggtttaacatcccacaggtgtccccg
tgccctgaagtaggggcctacttgaagatgaccccagaggagctccacgcactggacccc
aagaacatccagggctatgcacgcagacttctctgtgacgcctatatgtgcatgtaccag
agtcccaccatgagcctctataaatag
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