KEGG   Carassius gibelio (silver crucian carp): 127961791
Entry
127961791         CDS       T08819                                 
Name
(RefSeq) small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127961791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127961791
   03041 Spliceosome [BR:cgib03041]
    127961791
   03032 DNA replication proteins [BR:cgib03032]
    127961791
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     127961791
Spliceosome [BR:cgib03041]
 Complex A
  U1 snRNP components
   Sm proteins
    127961791
  U2 snRNP components
    127961791
 Complex B
  U1 snRNP components
    127961791
  U4/U6.U5 tri-snRNP components
    127961791
 Complex C
  U2 snRNP components
    127961791
DNA replication proteins [BR:cgib03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     127961791
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 127961791
NCBI-ProteinID: XP_052417006
LinkDB
Position
B7:complement(6036454..6038038)
AA seq 150 aa
MWCYYPPVHRVALFSDALFSPAARSKCARSPSLTRRQGVRVCYYSLCYLNKQFFLPQYPF
SSTVMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALA
GHLGEVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 453 nt   +upstreamnt  +downstreamnt
atgtggtgctattacccgccagtgcaccgtgtggcgctgttctcagacgcgctcttctct
cccgccgcaaggtcaaagtgcgctcgtagtccttccctcactcggcggcaaggcgtgcga
gtgtgctactatagcttatgctatttaaataaacaattttttcttcctcagtatccattt
agctctacagtcatgagtttgccgctgaaccccaagccctttctgaacggtctcacgggg
aagcctgtgatggtgaagctgaagtggggcatggagtacaagggctacctggtgtctgtg
gacggctacatgaacatgcagctggccaacacagaagagtatgtggatggagcattggcg
ggtcatctcggagaggtgctcatcaggtgtaacaatgttttgtacataagaggagtagaa
gaagaggaggaagacggcgagatgagagaatga

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