Carassius gibelio (silver crucian carp): 127961924
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Entry
127961924 CDS
T08819
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin isoform X1
KO
K27892
neural-cadherin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127961924 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Cadherin related
127961924 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
EGF
hEGF
Y_Y_Y
EGF_2
Big_9
cEGF
Motif
Other DBs
NCBI-GeneID:
127961924
NCBI-ProteinID:
XP_052417199
LinkDB
All DBs
Position
B7:complement(24144237..24442321)
Genome browser
AA seq
2901 aa
AA seq
DB search
MFWTILLPYCVTFVLGNKTDERIPFFHGHVFENSPPGSKVNGLSIPVKRIDPQRWCSKSG
MHLKLLGDRSEDFHVFAHHKRGHILLKTSNVLDREERAEYLLSLALCCQSCASAERVVAE
VASVKVDVLDTNDHEPTFQHADVKITLDDATALRSVVYTVKAEDIDSGKNAELIYYALPR
NGSFYVVPKTGDILLVDSILGLAQPIKFSVFARDHGWPARTSQNMDVEISPRQWPALPQI
DNGLSRKSRSVPEPVLITVSEDASIGSVIMNLHPVRFQSASFELIHPDADNSPVTVSRDS
GDLVISRRLDRETQPLVEITVKVQDKRGPDWYTVRVDLTVMDVNDNAPEWTMVPFPYLSV
VSANAPANTLVYKLQARDGDDGINGEVEYFLSDGGDGRFEVDRKNGHVRTTGLPLQRDRE
YLLTVVAADRQGSRSPPAVVSIIAGPRAPQFTNVSYTISIPENTPEGQPFLVTPAVSFQK
QPVTYSLLINPSSLFSMQPETGEISLTRTLDYESDQHRYLLLVRASESQDSLSSAAEVRV
IIMDENDCVPEFQQSIYSKDGVPETVTTATSLLQVSASDCDSEQNAEITYYTLSPDFIIS
AHGTIFPAGPLDYDRTNHLYEFVVMAVDKGEVPHTGTATVRLRMANVNDEPPEFSQPVYR
TFVSEDAGPNTLVATVLAKDPDGDGITYKITAGNEEGNFVIDSQKGLIRLRSSPSPRLQG
VKYILNVTATDDNASGGPQSLSAIAQVIVGVDDVNNNKPVFEKCAEYKEKASVLENKPAG
TFVLQVHADDADEGANGKVTYGFMHKDSTVPAFSIDPETGVIVTAMTFDRERQREYAVTV
TATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDDDYS
TNAAITYSMSEEQPEYLRVNPLTGWIYVNQPISQRTYISRQIIATDGGNRSSSVELAVTI
TNVKNQPPQWEKDKYEVVIPENTVRDTPVVTIKATSPLGDPRVTYNLEDGLVPESNMPVR
FYLTPNREDGSASILVAEPLDYETTRNFMLRVRAQNVAPVPLAAFTTVHINITDVNDNVP
FFTSSIYEASVTEGAEVGTLVLQVSANDLDLGLNGKISYSLLNDRSGDYQYFRIDPELGT
IYTEAVFDRETKGSYLLEVKSVDGWESARPGKHGQPNSDTAYVRIFISDVNDNKPVFAQS
VYEVDVDEDADVGYTILTVSANDEDEGANAKLRYQITSGNVGGVFDMEPEVGTIFIAQPL
DYELNKLYKLHILASDGKWEDYVTVIVTIVNKNDEAPVFSVNEYYGSVTEELDGSPVFVL
QVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREARAVWRFVVLATD
EGGEGLTGFTDVIINVWDINDNAPLFACAPDSCSGDVAENSPPGTSVMEMTATDLDDAAV
GQNAVLAYRIVGNAALNGANSGADVFSINPATGTVSVAMSGLDREQTDSYILVVEARDGG
GMIGTATATIHVTDVNDHVPRFLDRSCSIHIPESSEPNTPIIELAAEDADSGENGQLTFS
VVAGDPEQKFYMVSHRQEQRGTLRLKKHLDYERPGEQRFNLTIKVEDMQYSSMLHCTLEV
EDCNDHVPVFIPHFIQLPAVREDVAPGTSVASVAASDLDSGLNREITYSIAPESDPYHLF
SVDQSGLVTVASELDREMDAQHHLVVLATDHGTPPLTGTATIQMALLDVNDNGPEFEAAY
APIVWENVLGPQVVRLNQSSTLLRAVDRDSEENGSPFSFSVPLEYRYSNDFHLQDNGNDT
ATITALRAFDRERQKEFLLPVIMTDSGSPPKTVTNTLTITIGDENDHAHVAGQKKVFINC
HRGRMPTNVLGKVYSPDPDDWDNKTYAFEGHVPNYFILNKRTGFLIIKENAPPGSYDFQV
RVSDGVWPDAVSSVKVNVKDLRDDAIYNSASLRLADISATEFMERRGNLKNRYELLGDFL
SDMLSVGADDINIFSLVEERHRTLDVRFSIHSTPFLRAERVHGYLAAHKQKLQSFLQVNV
TQVHVDECVDADCRGGGGCTSHLSVSDKPAVVDSGSMALVSVTVEATAVCSCSAREHLHQ
SCSVYPRNPCHNGGVCIDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPPIRPCFES
HLSLEFITEVADGLLLYSGPLSQLQPWEPEDFMAIELIDGTPTLKINHGSGTLVLQLPGN
VNVADRRWHRLDVRSNSKEVRFTLDRCAGATIMEMEGVGSWLTTEDHTSCEVSGITPNMD
KHLNMTQVLQLGGVNENLPYIYPQLQHKHFTGCIRNLVVDSKFYDLGSPADSSGSAPGCV
MTDNSCVTMGFPSCGTRGRCHGEWGSFSCQCIPGYSGHQCEKEVPEYSFDGRSHIHFQLA
FTLPARHTQVQVLVRTRKHSSSILSLLSKEQNEYLKLEIYQGLLSVFYNLGDGDFNLTMP
SYRLDNGEWHDIHLDRHDNELTLRLDGGGGRREVTGSPGHSREIVIDPAVVMLGNSFPSG
HNKSFQGCMRDLRLNGRFIPLDGQAREGVSLVSSQGVSLGCSSDSCRKNQCSPPFTCVDL
WRIHECRCPPGHMVKANSTGKFCVYTLCASRPCHRGTCVAQSPSKFTCHCPEGYRGLHCE
VTLAVYQDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYNVSAHHDGW
EDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRAIHHHPPSQQQQQH
FYQPDPSSRAGTTTTTSSISSGTATIRRDVPPCRSPAQGQTANPSRAAQLARKSLSFSSQ
DLARYLCEIIRDADQHPETAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEGTTAGHECLK
EWGPRFEKLKALYERAEGNDL
NT seq
8706 nt
NT seq
+upstream
nt +downstream
nt
atgttttggactattttgttgccatattgtgtgacttttgtgctgggaaataagaccgac
gaacgaatacctttcttccacgggcatgtgtttgagaactctccacctggttcaaaagtg
aacggactgagtatcccggtgaagcgcatcgatccgcagcgatggtgctccaagtccggg
atgcacctgaaactcctgggggacaggagtgaagattttcacgtcttcgcgcaccacaag
cgaggacacatattgctgaaaacatctaacgttctcgatcgagaggagcgcgcggagtat
ctcctcagtctggcgctgtgctgtcagagctgcgcttcagccgagcgcgtcgtggccgaa
gttgcttcagttaaagtggacgtgctcgacacgaacgaccacgagcccactttccaacac
gcagacgtcaaaataactttggacgacgccacggccctgaggtcggtggtgtatactgtg
aaagcggaggacattgacagcggcaaaaacgccgagctcatatactacgcgctccctaga
aacggcagtttctacgtggtgcccaaaaccggcgacatcctcctcgtggactcgattctg
ggtctcgcgcagcccataaagttcagcgtgtttgcgcgagaccacggctggcccgctcgg
accagtcagaatatggatgtagagatcagtccgcgccaatggccagcccttcctcagatc
gataacggactctcgagaaagtcccgctccgtgccggagccggtgcttatcaccgtgtcc
gaagacgcgagtatcggctccgtcataatgaatctacacccggtgaggtttcagtccgcc
agttttgagctgattcacccggacgcggataactctccggtcaccgtgagtcgggacagc
ggagatttggttatatcaaggcggctcgaccgagagacgcagccgctagtggagataact
gtaaaagtacaagataagcgaggtcctgactggtatacggtgagagtggatttgacggtg
atggacgtcaatgataatgccccagaatggacgatggtccctttcccgtacctgagtgtg
gtctctgcgaatgctccagcaaacactctagtctacaagcttcaagccagagatggtgac
gacggcattaatggagaggtggaatacttcctgtctgacggcggtgacgggagatttgag
gtggacaggaagaacggtcatgtgcggacgacaggcctccccctgcagagggacagagaa
tacctgctcacagtggtggctgctgaccggcagggcagccgcagtcctcccgctgtagtg
tccatcatcgctggcccaagagctcctcaattcaccaacgtgtcttatacaatctccata
ccagaaaacacaccagaaggccaacccttccttgtcactccagcagtgtccttccaaaag
cagccagtaacttacagcctgctcatcaatcccagcagtcttttcagcatgcagccagag
acgggggagatcagcctgacccgtactctagactacgagagtgaccagcaccgctacctg
ctgctggtgcgggccagcgagagtcaggacagtctcagcagtgctgccgaggtgcgagtg
atcatcatggatgagaatgactgtgttccagaattccagcagtccatttatagcaaagac
ggtgtccctgagacagtcacgactgcaacgtcacttctgcaggtatcagccagcgattgc
gattcggagcagaatgcagagatcacatactacacgcttagtccagatttcataatttca
gcccatggcaccatattcccggcaggccctctggattatgacaggaccaaccacctgtat
gaattcgtagtgatggcggtggataagggcgaggtgccccacactggcacggccaccgtg
cgtcttcgtatggccaatgtcaacgacgagcctccggagttctcgcagcctgtgtatcgg
acctttgtctcagaggacgcaggacccaacactctggttgcaacggtgctggccaaggac
ccagatggagatgggatcacatacaaaattacagcaggcaatgaggaaggcaactttgtc
atcgacagccagaaaggattgatccgtctccgctccagcccatctcctagacttcaggga
gtaaagtacatcctgaatgtaacggcaacagatgataacgcctctggtgggccgcagtca
ctctccgccatcgcccaggtcattgtaggagttgacgatgtgaacaacaacaaacctgtg
tttgaaaagtgtgcggagtataaagagaaggcatcagttctggaaaataagccagcggga
acatttgtgctgcaggtccatgcagatgatgctgatgaaggagccaatggaaaagtcaca
tatggttttatgcataaagacagcactgttcctgccttcagcattgatccagaaacaggt
gttatcgtaactgctatgacgtttgatcgggagaggcagagagagtatgcagtaacagtg
acggccacggaccaagcggcggaccccctcataggcatctgccagctcaacatccttatc
ctcgacgagaacgacaatagccccaaatttgagaacttgcgctatgaatacttcttacgc
gaagacaccatgatcgggaccagttttctgcgagtggctgcgcatgatgatgattatagc
acgaacgcggccatcacttactccatgtctgaagagcagccggagtatctgcgagtcaat
ccactcactggctggatctacgtaaaccagccaatctcgcagaggacctacatcagcagg
cagatcatcgctacagatggagggaatcggagcagttcagtcgagctggcagtcactatc
accaacgtgaagaaccagcctccacagtgggagaaggacaaatatgaggtcgtcatacct
gaaaacactgtcagagacactccagttgtgaccatcaaggccacttctccgctgggtgat
ccaagggtgacttataacttggaggatggattggttccagaaagcaacatgcctgttcgt
ttctacctaaccccgaatcgtgaagatggctctgcctctatacttgtcgcagaacccttg
gactatgagaccacccgcaacttcatgcttagggttcgggctcagaacgtggcccctgtt
cccctggcggccttcactactgttcacataaacatcacagatgtcaatgacaacgttcca
ttcttcacctcctccatatacgaggcatctgtgactgaaggggcagaagttgggactcta
gtcctccaagtgtcagccaatgatcttgaccttggactgaatgggaagatctcatactct
ctacttaatgaccgtagtggagactatcagtacttccgcattgatcctgagctgggcacc
atctacacagaggctgtgtttgatcgagagaccaagggatcctaccttttggaagtgaag
tcagtagatggctgggaatcggccaggccagggaagcacggacagcccaactcagatacg
gcatatgtgcgtattttcatcagcgacgtgaatgataacaagccggtgtttgcgcagtcc
gtgtatgaggtcgacgtggatgaggatgctgacgtgggctacaccatcctcactgtcagc
gctaatgatgaagatgaaggtgctaatgccaagttacgttaccagattacatcaggcaat
gtgggaggtgtttttgacatggagcccgaggtgggaaccatcttcattgcccagccgctg
gattacgaactgaacaagctctacaagttgcacatcttggcgtctgatgggaagtgggaa
gattatgtgactgtaatagtcaccattgtgaataagaacgacgaggcaccagtgttctct
gtgaacgaatattatggcagcgtgacagaggagctggatggttctcctgtctttgtgttg
caggtaacagcatctgacccagataaggatgctgaccaggaggctttaagatattctctt
catggtcagggtgctgagagtgagttcatcattgacgaggtgacggggaagatttatgct
cagagaacattagaccgcgaggcccgggcagtgtggcgttttgtggtcctggccacggat
gagggcggcgagggactaacaggattcacagatgtcattatcaacgtgtgggacataaac
gacaatgctcctctttttgcttgtgccccagacagttgcagtggtgacgtggctgagaac
tccccacctggcacttccgtcatggagatgacagccactgatctggatgatgcagctgtc
ggacaaaatgcagtgttggcctataggattgtaggtaatgccgcccttaatggcgctaat
agtggagcagatgtgttcagcatcaatcctgctactgggacggtttcagtggcaatgtca
ggtctagacagggagcagactgactcgtatatcttggtggtggaagcacgagatggtgga
ggtatgataggaacggccaccgccactatacatgtgacagacgtcaacgaccatgtccca
cgcttcctcgaccgctcgtgctccatacacattcctgagagcagtgagcctaacacacca
atcattgagcttgccgcagaggatgcagattctggagagaatggccagcttaccttcagt
gtggtggccggtgatcccgaacagaagttttacatggtgagccatcgacaggagcagcgt
gggacccttcgtcttaagaaacatctggattacgaaagaccgggtgagcaacgcttcaac
ctcaccatcaaagtggaggatatgcagtactccagcatgctgcactgcacgctagaggtc
gaagactgcaacgaccacgtgccagtcttcattcctcactttatacagcttcctgctgta
cgagaggatgtcgctccaggaaccagcgtggcgagtgtggctgccagtgatttggactcg
gggttgaatcgcgagatcacttatagtattgctccggagtctgatccgtaccatctgttt
tctgtggaccagtcagggttagtcactgtggccagtgagctggaccgggaaatggacgca
caacatcacttggttgtacttgcgacagaccacggcacaccaccgttgactggcactgca
actatccagatggctctgctggatgtaaatgacaacggccctgagtttgaggctgcatac
gcgccaatagtgtgggagaatgttttgggcccgcaggttgtgcggcttaaccagagctcc
acgttattgagagccgtggatcgagattcagaagagaacggctcacctttttccttttct
gtgcctctggagtatcgttacagcaatgatttccacctgcaggataatgggaatgacacg
gccaccatcaccgccctgagagccttcgacagagagagacagaaggagtttctactacct
gtcatcatgaccgatagtggcagtccaccaaagaccgtcacgaacaccctcactatcacc
atcggcgacgagaatgaccacgcccacgtagctggacagaagaaagtgttcatcaactgt
cacagagggagaatgccaaccaatgtattggggaaggtttactcaccagatccagatgac
tgggataacaagacgtatgccttcgagggacacgttcctaattattttatcctgaacaag
cggacagggttcctcatcatcaaggagaacgctcctcctgggagttatgactttcaggtt
cgagtgtcagatggggtgtggccagacgccgtctctagcgtgaaggtgaatgtgaaagat
ctccgggacgatgccatctacaactcagcctctttgagattagcagatatctccgccaca
gagttcatggaacgccgtggcaatctgaagaacaggtacgagctgctaggcgacttcctg
tcagacatgctgtctgtgggggcagacgacatcaacattttcagtctggtggaagagcgg
cacaggactctggatgtgaggttctccattcacagcacaccattcctcagggccgagaga
gtccatggataccttgcagctcataaacaaaaactccagtcttttcttcaagtcaacgtg
actcaggttcatgtagatgagtgtgtggatgcagactgtcggggaggagggggctgcacc
agccatctgagcgtgtctgacaagccagcggtggtcgactcaggcagcatggctctggtg
tcagtgacggtggaagccacagctgtctgcagttgctcggcacgcgaacacctccaccag
agttgctctgtctatcccagaaacccctgccacaacggaggagtctgtatagacacgcag
agcggatacagatgccagtgcccggctcagtttgagggacctgagtgccagcagacaaaa
cacagtttccatggcaacggctatgcttggtttccccctataaggccatgcttcgagagc
cacctctcgctggagttcatcacagaggtggcagatggtttgctgctctacagcggaccc
ctctcccagcttcagccatgggagccggaagacttcatggccatagaactgatcgacggc
acccccaccctgaaaattaaccacggctcgggtacattggtcctgcagttgccgggcaac
gtgaacgtagcggacagacggtggcacagactggacgttaggagcaacagcaaagaggtt
cgttttacacttgaccgctgtgcaggagctactatcatggagatggagggagtgggcagc
tggctaactactgaagaccacacttcctgtgaagttagtggcatcacaccaaatatggac
aagcatctgaacatgacacaggtgcttcagctaggaggagtgaatgagaacctgccatat
atctaccctcagctacaacacaagcacttcactggctgtatccgaaacctcgttgtggac
agcaagttttatgacctcggttcaccagctgactcctctggcagtgccccgggatgtgtg
atgacggacaatagctgtgtgaccatgggctttccttcctgcgggactcggggacgctgc
cacggagagtggggttccttcagctgtcagtgcatacctgggtacagcggacatcagtgt
gaaaaggaagtcccagagtattcttttgatggaaggagtcacatacactttcagctggcc
ttcacgctcccggctagacacacgcaggttcaggtcctggtccggacacgcaaacatagc
agctctatcctcagcctgctgtccaaagaacagaatgaatatctcaaactggagatctat
cagggtctgttaagtgtcttctacaacctcggtgatggggacttcaacttgacaatgccc
tcttatcgtttagacaatggagagtggcatgacattcacttagatcggcatgacaatgag
ttgacgctgcgcctggatggcgggggaggacggcgagaggtcacaggatcaccgggtcac
agtcgggagattgttattgatcccgctgtagtgatgctgggcaactcattcccctcagga
cacaacaagagcttccaaggctgtatgcgggacctgagactcaatgggcggtttattcct
ctggatggtcaggccagagagggggtgtcattggtcagttctcaaggtgtgtctctgggt
tgttcctctgactcctgccggaaaaaccaatgtagccccccctttacctgtgtggacctg
tggagaatccatgaatgcaggtgtccaccaggtcacatggtcaaggcaaactccactggg
aaattctgtgtgtacacgctctgtgccagccgcccatgtcacaggggcacttgtgtggca
cagtctccctccaaattcacatgccactgtcctgagggctaccgtggcctgcactgcgag
gtgacgctggccgtctaccaagacgacgtgggcctcagtttcagctccctctttgccata
tgcatctgctttatggccctactagtgctgctgttggggattttcctgtacacacgctgg
aggagctataaggggctgaaggagggtgtatataacgtctctgcgcaccatgacggatgg
gaggacattcgagagaacgtgctcaactacgacgaggagggcggtggggaggaggatcag
aatgcctatgatatggcagagctccagaagtccctgcagcccagcccagcccagtcggtg
cagtacagccggtcgcgagccatccatcaccaccctccctcccagcagcaacaacaacat
ttttaccagcctgaccccagctctagagcaggcacgaccaccaccacctcctccatctcc
tcgggaacagccaccatccgtagggacgtacccccctgccgctctccggctcaaggccag
actgcaaatcccagccgagcagcccagctggcccgcaagagcttgtcattctccagccag
gacctggcccgctacctgtgtgaaattatccgtgatgccgaccagcacccggagacagca
cccttcgactcgcttcaggtcttctctactgaggggggtgggtcgctggccgggtcactg
agctccttcagttccgctgggctggaagagggaacaacggcaggtcacgagtgtttgaaa
gagtggggaccgcgcttcgagaagctgaaagcactctatgagcgggccgagggcaacgac
ctctaa
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integrated database retrieval system