Carassius gibelio (silver crucian carp): 127961986
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Entry
127961986 CDS
T08819
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127961986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127961986
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127961986
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
127961986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3701
Motif
Other DBs
NCBI-GeneID:
127961986
NCBI-ProteinID:
XP_052417276
LinkDB
All DBs
Position
B7:complement(20119189..20149026)
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AA seq
1080 aa
AA seq
DB search
MFSFEGDFKRTPKVSLGGASRKEEKASLLHRTQEERRKREDERKRLKNAIIIQSYIRGYQ
DRKQQYAIQRGFFDHCVCQCQSGSGPQLTDSAILSQLARQLLFFYRLSEDRHRMIWMCQS
LVKHHAQFVKLLTGPERQSCLFQIKRILGHCCRLLQAFEDDSLNVAVPMRMLEVFSSERT
YLPFLQDENYVTALIEQILHYMVEKGYYRSLYVLVNHKLPSSLEYRDAPSIPLAQTLLEH
TIKPLHFTYSSCPPDTRQFVFSAFTEEFISVPFTEQIYHFFVPALSDPKLAFPFQNFLWS
LQATIASSAQARAQAPWLFYFVLSVGESGLGSLSEEGLLLYLNALQTLLPLLPVTECNST
ADINSDSEDEEEMTVQPPAAQDGSWISVHYITEECVQKMDTKQQTNALLTLVWRDSASED
IFTMMASICHTLMVQHRMMVPRVRLLYSLAFNARFLRHLWHLITSMKTKMITGSMVPLLQ
VMSRGSPMSLEDANRIIPLFYLFSSLFSHSLISVHDSEFFGSADGQSQTSMMPFSLAELV
TLSRCLRDACLGIIKLAYPETKTEHKEEYVAAFRSVGVKTNSQVQQHIQARQKRWVQLFK
VITNLVKMLKARDIRRPFCPSGHWLSDEVNIRADKVTQLYVPSARHVWRTRRMGRIGPLQ
STLDVGLEPPPLSVSEERHLAILTELPFVVPFEERVKIFQKLIYADKREVQGDGPFLDGI
NITIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKS
GFNPNQGFFKTTNEGLLYPSPTAEMLVGESFTRHYYFLGRILGKALYENMLVELPFASFF
LSKLLGRSADVDIHHLASLDPEMYRNLLFLKSYEGDVEDLGLNFTVVNNDLGEAQVVELK
PGGKDIPVTTANSIAYIHLVADYRLNKQIRAHCLAFRQGLANVVNLEWLRMFDQQEIQVL
ISGAHVPICLEDLKRFTNYSGGYSANHPVITIFWDVVESFSDEEKRKLLKFVTSCSRPPL
LGFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFCDQQQMRNKLLYAIESSAGFELS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttgagggagatttcaagagaacacccaaggtgtcccttggaggtgctagc
agaaaagaggaaaaagcgtcacttcttcatcgaacacaagaagaaagaaggaaaagggag
gatgagaggaaaagactaaaaaatgcaatcatcattcagtcatacataaggggataccaa
gacaggaaacagcaatatgccattcagaggggcttctttgaccactgtgtgtgtcagtgc
cagtcaggctctggccctcagctcacagacagtgccatactcagccaacttgctcgccag
cttctgtttttttacagacttagtgaagacagacacagaatgatctggatgtgtcagagt
ttggtaaagcatcatgctcagttcgtgaagctgctgacggggccagaaagacagagctgt
ctgtttcagatcaagaggatactggggcactgttgcaggttattgcaagcatttgaggat
gacagtctaaatgtggccgtcccgatgaggatgctggaggtgttttcatctgagagaaca
tacttgccctttctacaggatgaaaactatgtcactgcactaattgaacaaatattgcac
tatatggtagagaaaggttactacagatctctgtatgttttagtgaatcacaagttgcca
tcgagtctagagtatagagatgccccttccattccactggcacagacattgctggagcac
acgatcaaacctctgcactttacatacagctcctgccccccagataccaggcagtttgtt
ttttcagccttcaccgaggagttcatttcagtgcctttcactgaacaaatctatcatttc
tttgtgccagccttgtcagacccaaaactagctttcccatttcagaacttcctttggtca
cttcaggccaccatagcctcctctgcccaggccagagctcaggctccctggctattttat
tttgtgctatcagttggggaatcaggactgggttcactctccgaggaagggttgctgttg
tacctgaatgcgctccagactctgttgccattgttgccagtgacggagtgtaacagtaca
gctgacatcaacagtgattcagaagatgaggaagaaatgaccgtacagcctcctgctgca
caggatggcagttggatatctgtgcattatataacagaggagtgtgtacagaagatggac
accaagcagcagactaacgctctgcttacattagtgtggagagactcagcaagtgaagac
atcttcaccatgatggcctccatctgtcacacgctgatggtgcaacatcgtatgatggtg
cccagagtcaggcttttgtacagtttagccttcaacgctcgctttcttagacacctatgg
catttaatcacatctatgaagactaaaatgatcacaggctctatggttcccttgttgcaa
gtgatgtctcgaggttctccaatgtctctggaggacgccaacaggatcatccccctcttc
tatctcttcagttcactcttcagtcattcactcatctctgtgcacgacagcgagttcttt
ggctcagcagacggtcagagccagacgtcgatgatgcccttctctctggctgagttggtg
acattgtctcggtgtttgcgggacgcctgtctgggaatcatcaagctggcctatcctgag
actaagacggagcacaaagaggagtatgtagctgcgtttcgcagcgtcggggtgaaaact
aacagccaagttcagcagcacattcaagctaggcagaaacgatgggtccagctctttaag
gtgattaccaaccttgtgaaaatgctgaaagcccgagatattcgaagaccgttctgtcca
tcgggtcattggctgtctgatgaggtcaacatcagagcagacaaggtgactcagctctat
gtgccctcagcaagacatgtgtggagaaccaggagaatgggacgcatcggaccgcttcag
tccacattagatgttggactggagcctccaccattgtcagtatcagaggagagacatttg
gcaatcctcaccgaacttccgtttgttgtgccctttgaagagagagtgaagatctttcag
aagttgatctatgctgataagcgtgaagtgcaaggagacggccctttcttggatggcatt
aatatcaccattcgacggaactacatctatgaagatgcttacgacaaattatcccccgag
aatgagcctgatcttaagaagaggatcagggttcatttgctcaatgcacatgggctagat
gaagctggcattgatggaggaggaatattcagagagttcttgaatgagctgttgaagtca
ggctttaatcctaaccaaggcttcttcaagacaactaatgaaggtcttctctatcccagt
cccactgcagagatgcttgtgggagaatccttcacccggcattactacttccttggcagg
atactgggaaaggcactgtatgaaaacatgctagtggaattgccatttgcaagtttcttc
ctgtccaagctcttgggtagaagtgcagatgtggacatccaccatctggcctctctagac
ccagagatgtaccgaaacctgcttttcctcaagagctacgaaggtgatgtcgaagacctc
ggccttaacttcaccgtggttaacaatgatcttggggaggcccaggtggtcgagctcaaa
ccagggggaaaggacatcccggtaaccacagccaacagtatagcctacatccatttagtg
gccgattaccgtctgaacaaacagatccgagcacactgcctggcctttcgacagggtctg
gctaacgtggtcaacctggagtggctgcgcatgtttgatcagcaggaaattcaggtactg
atctctggtgcacatgtgcccatctgtctggaagacctgaagagatttaccaactactca
ggtggttattcagcaaaccatccagtgatcacaattttctgggatgtggtggagagtttc
agcgatgaggagaaacgcaagctgctcaagtttgttacaagctgctcacgacctccgctc
ttaggcttcaaggagctgtacccagccttttgcatccataatggaggcacagacctggag
cgtctccctactgctagcacttgcatgaaccttctcaagctgccagagttctgtgaccaa
cagcagatgaggaacaagttgctctatgctatcgaatcctctgctggctttgagctcagc
tga
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