Carassius gibelio (silver crucian carp): 127962025
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Entry
127962025 CDS
T08819
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127962025
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127962025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127962025
NCBI-ProteinID:
XP_052417391
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Position
B7:complement(12044601..12047864)
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AA seq
292 aa
AA seq
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MYSMMEHELKTAGQPHPHHNSPGMSPPVSGVGNAHHGSKTSCPAGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKEYPDYK
YKPRRKTKALMKKENPVGKYPLAAGNLLASAVAQGQGGSPRMDGYGWGHTGAYMGMQGEA
LGYPQQLHRYELSALQYPPAQTYMNGAGSYSQMSYSGSPQHPSSVMSMVKPEPLSHSPTG
VPNHHRGAFQGDLRDMISMYIPGSDNSDTSNQRAYPGVQQHYLGGTVPLTHI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcatgaactgaagaccgcgggtcaacctcatccccaccacaac
agtccggggatgtctcctccggtcagcggggttggaaacgcgcaccacggatcaaaaacc
tcttgtccagccggcggggaccccatggacaaagtgaagcgccccatgaatgcgtttatg
gtgtggtcccgaggtcaacggaggaagatggcacaggagaaccccaaaatgcacaactct
gagataagcaaacgtcttggtgcggaatggaaacttttaacggacactgagaagcggccg
ttcatcgatgaggccaaacggttgcgggccgtacacatgaaggaataccccgactacaaa
tacaaacctcggcgcaagaccaaagccctcatgaagaaggaaaaccccgtcggtaaatat
cccctcgcagccggtaacctgctggcatcagccgtggcacagggacaaggcgggagcccg
agaatggacggctatggctggggtcacaccggtgcttatatgggaatgcagggtgaagcg
ctcggatacccgcaacaactgcaccggtacgagctgtcagctcttcagtacccgccggca
cagacctacatgaacggagccggctcttacagccaaatgtcatatagtggcagccctcag
catcccagttcagtgatgtctatggttaaaccagaacccctatcccattcgcctactgga
gtaccaaaccaccaccgtggggctttccaaggggacctaagggacatgattagcatgtat
attccaggcagtgataacagcgatacctcaaaccagagggcctatcctggagtgcagcag
cactatcttggtggaactgttcccctcactcatatctga
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