Carassius gibelio (silver crucian carp): 127962060
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Entry
127962060 CDS
T08819
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127962060
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Other basic domains
RF-X
127962060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
127962060
NCBI-ProteinID:
XP_052417453
LinkDB
All DBs
Position
B7:16376951..16404588
Genome browser
AA seq
1499 aa
AA seq
DB search
MADDQQQPGAGAGALPSAVQGLQGAEANALQLKIKSSICKTVQSKVDCILQDVENLTDIE
KLYLYLKLPSGSSSGNEKNEQSSISSSRTQQLHAFSWIRSHLEEHPETSLPKQEVYDEYK
SYCDSLGYHALSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKRAFVQMPSLPNLD
LHKSGDGCEVFEPTGQLSSAEDEVRVAACGLVCEWAQKVLSRQFDSVEDLARFLLNSHYI
GTKSVAALTVMTGSPSGAKLSIQSSAFAPTTDAHSFQPQVKTLVSPSVDAKQQLQRKIQK
KQQEQKLHSPLPGEAQARRADGGITPGARTGIPCGSPALLSPQSIGIVVAAVSSPITVQR
SRQLLSPSPVPIGAADSKVLPVNFQVVTQSVHPVKQCPKTPHNISASPISDRSARHRYAQ
ILPKPSASSGITLRSPTLLITNSPIKTVMSTPHVSSVNVVKMTTISLGSNGSGTSTLADT
PASNKVRPASAGVASINDDPQPVTRVRSGSIAVMPSVLARLGRSTSTTPVIDTKTNTEAI
IGSGQEHGSTSRLATTLDTVGSVQRSGIFKPRAASVPTPLDKDSLGLDTLTGTKCSERTL
LSVKTLSAGSNNSSNTNESTLYRNTSSTHSNSGNGVVTSPKDSVLATRSPHKRPSLCTDL
SPTPVKKAHISVLPAGGSDGLKSNIMAKQIPRSSTPIRTESAPLKVTGKAIACPVRNTGF
QTVHRPQSISQGRWEGASSVMDYRVPVTSTAGQDTSVGNTMFQTVCRPRSISQGRWEESS
TGVEGRAVVTRTVSAPGQALLQQVAKKSQDLLIDQPDSSATYELKSVFWDSELQDATQQH
QEVYGPQMASEPKQMSTPLMEPLPAIAQASSSNQQAQMSDYRTQANLSYFPFDDDMTQDS
IVEELVQMEEQMKINSSIQSFSNCVDNSLQGQQQTMQTTMMSTLQTNTLYYSSAHSSSTP
IQTPTPTPTPTSEMIGSGQGMMHESPCSRLAPTTPVDSALGSSRQTPIGTPHSNCSSSIP
PSPVECRNPFAFTPINSSITGYHDGSIVSSSPVKPMQRPMATHPDKTKLEWMNSGYSNSG
GNTNNGITILPSYQDLVDDHFRKPHAFAIPGQTCQSQNRYHDTHISRLTPISPVQQQVAS
MASLNRKEGFAVPAPLDNKANSGSGTFRCRSVSPAVRQRNLSGTQNPSVPHSVVSPFNSP
VTPEVLNIFSNSDPDASISSMAQRSQSVPVTVMMQSEVLPMQAGQQMNTKNISNVLINKM
DGDGDDSVRGLGINNMPSNYTARMNLTQILETTTVPSFPGSASHQALISPCSSAFESQKP
SYLMKNAREEPMSFSVDESQAQSASGEHQSRQQQQHLGRRQLLGQKQQSQAMLLPLQQSL
QQHQHQQPLDLDRTVKDLLHEESLNAGCVGQGSELRAGSSVFPSDMRLTSELTGNINDLN
TLDTNLLFDPSQQQGQYEDSTLEELNNDPLFQQICSETVNSAGFDWLENKDQATVEMLG
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaccagcagcagcctggagctggagcaggagctttaccttccgcggttcaa
ggactgcagggagctgaagccaatgcgttgcagctaaaaataaagagctcgatctgcaaa
accgtacaatcaaaggtggattgcattttgcaagatgtggagaatcttacagatattgaa
aaactctacctctatctgaagttgccttctggatccagcagtggcaatgagaaaaatgag
cagagctccatttcatcgagtcgtacccagcagttgcatgcatttagctggattcgcagc
caccttgaggaacatcctgaaacatcgctgcctaaacaagaagtctacgacgagtacaag
agttactgtgatagcctggggtatcacgctctcagtgctgcagactttggaaagatcatg
aagaacgtctttcccaacatgaaggcacgtcgacttggcatgcgaggcaaatccaagtat
tgctatagtgggcttaggaagagggcttttgtacaaatgccatctcttcccaacctagat
cttcacaaatcaggtgatgggtgtgaagtgtttgaacctactggtcaactgtcgagtgca
gaagatgaggtgcgtgtggccgcatgtgggttggtgtgcgagtgggcacagaaagtgcta
agtcggcagtttgacagcgttgaggatctggctcgatttcttttgaacagccactatatt
ggaactaagtctgtggctgctcttactgtgatgaccggttccccatcaggagcaaaattg
tccattcaatcatctgcatttgctcccacaaccgatgcacactcattccaaccacaggtt
aaaaccctggtctcaccctcagtagatgccaaacagcaactacaaaggaagatccagaag
aagcagcaagaacagaaactgcattctccactccctggtgaagctcaggccaggagggca
gatgggggcataactcctggggcaagaacaggcataccctgtggaagccctgctcttctc
tcacctcaatctattgggattgtggttgcggctgtttccagccctatcacggttcagagg
agcaggcagttgttgtctcctagccctgttccaattggagctgcagacagcaaagttctt
cctgtaaactttcaagtggttacccagtcagtgcaccctgtgaagcagtgccccaagaca
cctcataatatttcggctagtccgataagcgaccggtcagcccgtcatcgttatgcccaa
atcctgcccaagccatctgcctcaagtggcataaccctgcgctcaccaacattgcttatc
accaacagccccatcaagacggtgatgtcaactccgcatgtcagttcagtcaatgtagtc
aagatgacgactatatctctgggctctaatggcagtgggaccagcacactagctgatacc
cctgctagcaacaaagtcagacctgcatctgctggagttgccagcatcaatgatgatcca
cagccagttacacgtgttcgcagtgggtctatagctgtaatgccatcagttttggcaagg
ttaggccgctcaacatccacgacccctgtcatcgacactaaaacaaatactgaagccata
attggaagtggtcaagagcacggtagtacaagtagactggcaaccactctggacaccgtt
ggtagtgtacagcggtcagggatattcaaacccagagcggctagcgtacccactcctctt
gacaaggactctctgggattggacactctaacagggaccaaatgcagtgagaggacactc
cttagtgtcaaaactctgtctgctggcagcaataattcgtccaacactaatgaaagcact
ttgtaccggaacacaagtagcactcattcaaacagtggtaatggggttgtgacatcaccc
aaagattcagtgttggcaaccaggagccctcacaaaagacctagcttatgcactgatttg
agcccaacacctgttaaaaaagcccatatttctgttctaccagcaggtggatccgatgga
ctgaagtcaaacataatggcaaagcaaattccaagatcaagcactcctataaggacagaa
agtgcacctctcaaagtgacaggcaaagctattgcatgtccggtcaggaatactggcttc
cagacagttcacaggcctcaaagcatctcccagggaagatgggaaggagcttcatcagta
atggattacagagttcctgtcacctctacagcaggtcaggatacttcagtggggaatacc
atgtttcagactgtttgcagacctcgaagcatctcccaagggagatgggaagaatcttca
acaggtgtcgaaggtagagctgtggtcaccagaactgttagtgctccaggacaggctttg
ctgcaacaagtcgccaaaaagtcacaggatttgcttatagaccagcctgactcttctgcc
acatatgaactgaagagtgtattttgggatagtgagctgcaagatgctactcaacaacat
caggaagtttatggcccgcaaatggcgtctgagccaaagcaaatgtccaccccattgatg
gagccccttcctgcaattgctcaagcctcttcttccaaccagcaggctcagatgagtgac
tacagaacccaggccaaccttagctactttccgtttgatgatgacatgacccaggatagc
attgttgaggaacttgtacaaatggaagagcagatgaaaattaacagtagcatacaaagt
ttcagcaactgtgtggataattcactgcaaggccagcaacaaaccatgcagactaccatg
atgtccaccctccagaccaacaccctgtattacagctctgctcatagcagcagcacccca
atccaaacacccactcctacacctactcccacttctgagatgatcggaagtggtcaaggt
atgatgcatgaaagcccctgttcgcgcttagccccaaccactccggtcgacagcgctctt
ggaagtagtcgacagacacctattggcactccccactccaactgcagcagtagtatccca
ccaagccctgtggaatgcaggaacccttttgcctttactcctattaactccagcatcact
ggataccacgatggaagtatcgtctcctcaagccctgtcaagccaatgcaaagaccaatg
gccacacatccagataagactaaactggaatggatgaacagtgggtacagtaacagtggt
gggaacaccaacaatggcattaccattctgcccagctaccaagacctagtagatgaccac
tttcgaaagcctcacgccttcgccatcccaggccagacctgtcagtcgcaaaacagatat
catgacactcatatcagccgcttgacacccatttcgcctgtccaacaacaagtggcaagc
atggctagcctcaacaggaaagagggttttgctgttccagcaccccttgacaacaaggcc
aactcagggtctggaacatttcgatgccgcagcgttagcccagcagtcaggcagcgcaac
ttgagcgggacccaaaatcccagtgttccccactctgtggtctcacctttcaactcacct
gtaacacctgaagtgctaaacatcttttctaacagtgaccctgatgcaagcatcagcagc
atggcacagaggagtcagtctgttccagtcacagtgatgatgcagtctgaggttctaccc
atgcaagcaggccagcagatgaataccaaaaacatcagcaatgtcctcatcaacaaaatg
gatggcgatggagatgactctgtacgtggcctcggaatcaacaacatgccatccaactac
actgcccgcatgaatctcacccagattctggagaccaccacagtgcccagctttcctggt
agtgccagccaccaagctctgatctcgccttgttcatcagcctttgagtcccagaagcct
agttacctcatgaaaaatgccagagaggagccgatgagcttctctgtagatgaaagccaa
gcacaatcagcctcaggggagcaccagtctcgacaacagcagcagcacttaggcagacgg
cagctccttgggcagaaacaacagagtcaggccatgcttttgcctctacagcaaagcctc
cagcagcatcagcaccagcaacccttggatttagacagaactgttaaagatcttttacat
gaggaaagcttgaatgctggctgtgtggggcaaggatcagagctccgtgctgggagttca
gtgtttcccagcgatatgcgactaacctctgagcttaccggtaacataaatgacttaaat
acattggacaccaaccttctttttgaccccagtcaacagcaaggacaatatgaagactcg
acactggaagaactgaacaacgacccactttttcaacagatatgcagcgagactgtgaat
tctgcgggctttgactggttggagaacaaagaccaggcaacagtggaaatgttgggttaa
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integrated database retrieval system