Carassius gibelio (silver crucian carp): 127962122
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Entry
127962122 CDS
T08819
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127962122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127962122
Spliceosome [BR:
cgib03041
]
Complex A
Other components
Complex A specific factors
127962122
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GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
127962122
NCBI-ProteinID:
XP_052417550
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All DBs
Position
B7:10098458..10107235
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AA seq
663 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFESGPGAGLMAPPGPAVSFPLQNLQQPQLSNPSFSQFP
GAVSSALTNPVGVGIPLPSQAGSGDFGQKKRKRSRWSSETPDQKTIIPGMPTVIPPGLTR
DQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLE
EERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKN
IEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNIL
KQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAG
HISSDCKFTSSFAQRPGEPPQSAQDKARMDKEYLSLMAELGEAPIPASSGGHNNPPPSGP
RPAGPNNNQPPPNRPPWMNSGPTDNRNYHGMHQGPGGPHNFPPPMPNMGGPPMPPNPNGM
PPPWMQPPPPPMSQGPAPPGHPMGLLPPPMGMMPPPPPPPNNQPPPSGPLPPWQQQAPPP
PPTSSMATSAPLPWQQNTTTTSTPVTGNLPPWQQPQQTATSATQPPPPMGTPSMVPPPPG
VQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNYVTMMGIPGMPPYGMPPAPPPPP
PQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaatgcaacccctctggggaagctgcacccgagtatcggcgctaag
cgaggctttgagtctggtcccggcgcggggttaatggcacctcccgggcctgcggtttct
ttcccgctgcagaatttacagcaaccgcaattatcaaacccaagtttttctcagttcccc
ggagccgtgagttctgcgctgacaaacccagtcggagtaggaataccgttaccgtctcag
gcggggagtggagattttggccagaagaaacgtaaaaggagtcgctggagcagcgagacc
ccggatcagaagaccattatcccaggcatgcccactgtgatccctcccggtctgactcgg
gaccaggagcgagcttatatagtccaactgcagatcgaagacctgacacgtaaactgcgt
acaggagacctgggaatccctgttaaccctgaggacagatctccatctcctgagcccatc
tacaacagtgaggggaagaggcttaatacacgtgaatatcggacacgtaagaaactggag
gaagagaggcattctctcattacagagatggtgggactgaaccctgaattcaaaccccct
gctgactacaaaccaccagctactcgtgtcagtgacaaggtaatgattcctcaggatgag
tatcctgagatcaactttgttgggcttttgattgggccacgtggaaacactctgaaaaac
attgagaaggagtgctgtgctaagatcatgattcgtggtaaaggctcagtaaaggaggga
aaggtgggccgtaaggatggacagatgcttcccggagaagatgaacctcttcatgcactg
gtcactgctaacaccatggagaatgttaagaaagctgtagagcagattcgtaatatcctc
aagcagggcattgagacccctgaagaccagaacgacctgagaaagatgcagctaagggag
ctggcacgcctcaatggcactctgagagaagatgataacagaatcttgcgcccgtggcag
agcactgagcctcgcagcatcacaaacacaactgtgtgtacaaaatgtggtggagcaggt
cacatctcatcagactgcaagtttaccagttcctttgcacaacgacccggtgaaccaccc
cagtctgctcaggataaggcccgtatggataaagagtacttgtctctcatggcagagcta
ggagaggctccaatccctgcctccagtgggggccacaacaatcctccccctagtggacct
cgtcctgcaggacccaacaataaccagccaccaccaaatcgtcctccttggatgaattca
ggccctactgataacaggaattaccatggcatgcaccagggtcctggtggccctcacaac
ttccctccaccaatgccaaacatgggtggccctcctatgccgccaaaccccaatggtatg
cctccaccctggatgcagccgccgccgcctccaatgagccaaggcccagccccacctgga
caccccatgggtttattgccaccacccatgggtatgatgcccccgcctccacctcccccc
aataaccaacctccaccctcaggacctctgccaccttggcaacagcaggcacccccccca
ccacccaccagcagcatggcaaccagcgctccactgccttggcaacagaatacaaccacc
acatccaccccagtcactggaaacctgccaccctggcaacagcctcagcagacggccacc
tcagccactcagccccctccacccatgggcaccccctctatggtgccgcctccacctggg
gtccaacccccacttccgcctggtgcgccacctcctccaccaccccctcctcctggctca
gctggcatgatgtatgcacctcctcccccacccccacccatggaccctaactatgtgacc
atgatgggaattcctggtatgccaccttacgggatgccccctgcacctccaccacctccg
ccccagagttaa
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