Carassius gibelio (silver crucian carp): 127962221
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Entry
127962221 CDS
T08819
Name
(RefSeq) neurexin-1-like isoform X1
KO
K07377
neurexin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127962221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127962221
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127962221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
127962221
NCBI-ProteinID:
XP_052417691
LinkDB
All DBs
Position
B7:1348863..1756924
Genome browser
AA seq
1673 aa
AA seq
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MQSGCWSSLWPLWPLLLAGLFLSAGALEFGGAPGQWARYARWEAGSIGELSFSLKTNVSK
ALVLYLDDGGNCDFLELIIGGGHLQLRFAIHCAEPAALQMETRVNDDRWHMVLLTRNYRE
TMLMVDGETKVAEVRSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFMGLISNLK
VGEMPPTLLNSNGIHNDLEYLCVKQNPCLNGGYCSVQFGEVHCDCSHTRFRGKYCKEEEY
AVEGLAHLTLNSQGDSSLVGKEESVATFKGNEFFCYDLSMTPIQSSTDEITLSFRTLQRN
GLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQ
HSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCL
KDVVYKNNDFKLELSRLAIESDPKISLHGDLVFRCEDVAALDPVTFETAESYIALPRWDT
KKTSSISFDFRTTEPSGLLLFSHGKPQSREQRPGREMKTDYFAMELLDGFLYLLMDMGSG
SIKLKTSNKKVNDGEWCHVDFQREGRRGSISVNSRSIPFSSNEGSEILDLDSDMYLGGLP
ESGQGLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSAPGVSSFCTRELQKR
CSSAPCANGGQCKEGWNRYICDCTGTGFLGANCEIEATVLSYDGSMYLKILIPSTLHTEA
EDVSLRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPEILT
AGQKLNDNEWHSVKVVRRGRNLQLSVDNVTVEGQMTGDHTRLEFHNIETGIMTERRFISV
VPSNFIGHLQGLTLNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRNRGSYLALAT
LQAYASMHLFFQFKTTSSDGLLLFNSGDGSDFIVVELVKGFVHYVFDLGNGPSLMKGNSE
KPLNDNQWHNVVVSRDTNNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVARSMYSSLP
KLIASRDGYQGCLASVDLNGRLPDLLADALHRVGQVERGCDGPSTTCTEDSCHHQGVCLQ
QWEGFSCDCTMTSYGGSYCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQL
KEAVLVRVESAKGLGDYLELHIERGRVGVIFNVGTDDIVIEESGVMVSDGKYHVVRFTRS
GGNATLQVDNLPVLERFPSGGFDSERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQA
FIKVGGGEKGRNFQGQVSGLYYNGLQVLKLAAEGDPNVQVQGNLRLVGDVPSVMSTDTTS
TTPLADMSTTIMETTTTMATTTTRRQRSPTMRDSVTQNTDDLLVASAECPSDDEDLEECE
PGNGGELVLPIITVDSLDPPSIVTHYPVIPPPPTYRPFLTLLETTKDSLPLPGRPPCPLD
QEDCEEPMEVSAYGSGEMTESDDEDYYKNSPLVTDRTVLPPPPAAGDPRGDRPIARNPKS
PRPPLPFAPTAPPVPRLKPGINSGPNIPAGKMNTRDQVLLPPIQPSGDPEHGGRHRHVPG
ITYPPNFPHVPTTDPSSPDRGPPGAVEVIRESSSTTGMVVGIVAAAALCILILLYAMYKY
RNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPGAAKMGTKSKKNKDKEYYV
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgggtgctggtcctctctctggcccctgtggcccttgctgttggccggactc
tttctgtcggctggggccctggagtttggtggagccccggggcagtgggctcgctacgcc
cgctgggaggccggttccatcggggagctcagctttagcctgaagaccaatgtgagcaag
gcactggttctgtacctggacgacggtgggaactgtgactttctggagctgatcatcggc
ggcggacacctgcagctgcgcttcgccatccactgtgccgagccggccgccctccagatg
gagacccgtgtcaacgatgaccgctggcacatggtgctgctcactcgcaactaccgcgag
accatgctgatggtggacggggagaccaaagtggcggaggtgcgttccaagcgcaaggag
atggcggtcgtcagcgacctgttcgtggggggcatcccaccggatgtgcgtctctccgcg
ctcacgtccagcacggtcaagtacgagcctccgttcatgggtttgatctccaatctgaag
gtgggcgagatgcctcccactcttctcaacagcaacggcattcataacgatctggagtat
ctgtgcgtcaagcagaacccctgcctcaacggaggatactgcagcgtccagttcggcgag
gtccactgcgactgctcccacacacgcttccgagggaaatactgcaaagaagaagagtac
gcggtggaaggtctggcgcacctgacgttaaacagccaaggagactcgtctctagtcggg
aaagaagaatcggtggccaccttcaaggggaacgagttcttctgttacgatctgtccatg
actcccatccagagcagcacggatgagatcacgctgtccttccgaacgctccagcgtaac
ggcctgatgcttcacaccgggaaatctgcagactacgtcaacctgtctctgaagagcgga
gccgtgtggctcgtcatcaacctgggctccggcgccttcgaggcgctcgtggaaccggtg
aacgggaagtttaacgacaatgcttggcacgatgttaaagtcacgcgaaacctgcgacag
cactcaggcattggacacgctatggtcaccatctcagtggacggcatcctgaccaccact
ggatacacgcaggaggactacaccatgctgggctccgacgacttcttctacatcggagga
agcccaaacacggccgacctgcccggatctcctgtcagcaacaacttcatgggctgcctg
aaagacgtggtgtacaagaacaacgacttcaagctggagctgtctcgtctggccatcgag
agcgaccctaagatcagtctgcacggggacctggtgttccgctgcgaggatgtggcggcc
ctcgaccccgtgaccttcgagacggccgagtcctacatcgccctgccgcgctgggacaca
aagaagaccagctccatctccttcgacttccgcaccacggagcccagcggcctgctgctg
ttcagccacggcaaacctcagagccgagagcagcggcccggccgagagatgaagacggac
tacttcgccatggagctgctggacggcttcctctacctgctgatggacatgggctccggc
agcatcaagctcaagaccagcaacaagaaggtgaacgacggagagtggtgccacgtggac
ttccagagagagggacggagaggctccatctccgtcaacagccgctccatccccttcagc
tctaacgagggcagcgagatcctggacctggacagtgacatgtatctgggtggtttgccg
gagagcggtcagggcctgatcctgccgcccgaggtctggaccgcgctgctgaactacggt
tacgtgggctgtgtccgtgacctgttcatcgacggcaagagtcgagacgtgcgtcgtctg
gctgagatccagagcgctccgggcgtcagcagcttctgcacgcgtgagctccagaagagg
tgcagcagcgccccctgtgccaacggaggacagtgcaaggagggctggaaccgctacatc
tgtgactgcactggaaccggattcctgggagccaactgtgagatcgaggcgacggtgttg
agctatgatggcagcatgtatctgaagatcctgattcccagcacgctgcacacagaggct
gaggatgtgtctctgcgcttcatgtcccagcgagcgtacggtctgctcatggccaccacc
tccaaagagtcagctgacacactgcggctggagctggacggaggacgggtcaaactcacg
gtcaacctcgactgtatcaggatagactgtaacctcagtaaaggtccagagatcctgacg
gcgggtcagaaactgaatgataacgagtggcactcagtgaaagtggtccggcgcgggagg
aacctgcagctgtccgtggataacgtgactgtggaaggtcagatgaccggtgatcacacg
cgtctggagttccacaacatcgagacgggcatcatgacggagcgcaggttcatctccgtg
gtgccgtctaacttcatcgggcacctgcagggcctgacgctcaacggcgtgccgtatctg
gaccagtgtaagaacggagacatctcgtactgcgagctgaacgcccgcttcggcatgcgc
cacatcatcgccgaccccgtgaccttccgtaatagaggcagttacctggcgctggccacg
ctgcaggcgtacgcctccatgcacctgttcttccagttcaagaccaccagcagcgacggc
ctgctgctcttcaacagcggcgacggcagcgacttcatcgtggtggagctggtcaaaggg
ttcgtccactatgtgtttgacctggggaacggcccgtctctgatgaagggaaactctgag
aagccgctcaatgacaatcagtggcacaatgtggtggtctcacgcgacactaacaacgtg
cacacgctcaagatcgactctcgcaccgtgacacagcactctaacggagccaggaacctg
gacctcaaaggagagctgtatatcggtggagtagcgaggagcatgtacagcagtctgccg
aagctgatcgcgtctcgggacggataccagggatgcctggcctccgtggacctgaacggc
cggctgccagacctgctcgcagacgccctccacagagtcggccaggtggagcgaggatgc
gacggacccagcaccacctgtacggaggactcgtgtcatcatcagggggtgtgtctgcag
cagtgggagggcttctcgtgtgactgcaccatgacgtcctatgggggctcgtactgcagc
gatcctgggacgacctacatcttcggccgcggaggagccctcatcacgtacacgtggccc
ccgaacgaccggccgagcacgagggcagaccggctggccgtgggcttcagcacgcagctg
aaggaggccgttctggtgcgggtggagagcgccaagggactcggagactatctggagctt
cacatagagcgcgggagggtcggcgtgatctttaacgtggggacggatgacatcgtcatc
gaggagagcggggtgatggtcagcgacgggaagtatcatgtggtcagattcacacggagc
ggtgggaacgccacactacaggtggacaatctgcctgtgctggagcgcttcccttcaggg
ggctttgatagtgaacggctggctattgctaggcaaagaatcccgtaccgactcggtcgg
gtagttgacgagtggctactcgacaaaggtcggcagctgaccatcttcaacagccaggcc
ttcattaaggtgggcgggggtgagaagggccgtaacttccagggtcaggtctcggggctg
tactataacggcctgcaggtgctgaagctggcggcggagggcgatccgaatgttcaggtg
caggggaacctgcgtctggtgggagacgtgccctccgtcatgagcaccgacaccacctcc
accacacccctcgcagacatgtccaccaccatcatggagaccaccaccaccatggccacc
actaccacccgcagacagcgctcgcccaccatgagagacagcgtcacgcagaatactgac
gatctcttagtagcgtcagcagaatgtccgagtgatgatgaagatctcgaggagtgtgag
cctggaaacggaggtgaactagtgttgccaattataactgtggattcccttgacccccca
tcaattgtgacacattaccccgttattcccccgcccccgacctatcgccccttcctcacc
ttgctcgagaccaccaaagattctctccccttgcccggccggcccccctgtccgctggac
caggaggactgtgaagagcccatggaggtctcggcctacggctcgggcgagatgacggag
tccgacgatgaggattattataaaaactccccccttgtcactgaccggactgtactcccc
cctccccctgcagccggggacccccgaggcgaccggccaatcgcacgtaatcccaagtcc
cctcgccctccgctcccgttcgcccccacggcccccccggtgccccggctcaaacccggc
atcaacagtggccccaacatccccgcgggtaaaatgaacacccgtgaccaggtgctgctg
ccgcccatacagccatcgggcgacccggaacatggcgggcggcaccggcatgtcccaggt
ataacatatcctcccaattttccccatgtgcccactacagacccctcatcaccagaccga
gggcctccaggagcagtggaggtgatccgagagtccagtagcacgacgggcatggtggtg
ggcattgtggctgcagccgctctctgtatcctcatcctactctatgccatgtacaagtat
cgcaaccgcgacgaaggctcctaccaggtggaccagagtcgcaactacatcagcaactcg
gccacgcaaagcaacggagccctggtgaaggagaagcaacccggtgcagccaagatgggc
acaaagagcaagaagaacaaagacaaggagtattacgtctga
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integrated database retrieval system