Carassius gibelio (silver crucian carp): 127962342
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Entry
127962342 CDS
T08819
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127962342
04121 Ubiquitin system [BR:
cgib04121
]
127962342
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127962342
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127962342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
127962342
NCBI-ProteinID:
XP_052417875
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All DBs
Position
B7:complement(41405847..41408360)
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AA seq
634 aa
AA seq
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MSTRKRSDVWSHFVATTATEAKCNICKKGFSIKGGSTSNLRRHLKSAHPTVLLSQVRTET
EDDSPAAAGAVSTTSTFSAGPLTALAGTLTTSTASSTPAAATIIQGAVRPRRPQQQTSMS
SFVTRPMDPLRQSKLDEALVRMIACDFQPFSIVEDKGFKEYSHLLDPSYSLPSRKTLSKT
VMPRLYDKLRSDIMDKIKTASAVCLTTDCWTSLTTTSYMTVTCHFIEDFQMTSYLLDCFV
LTDRHTAAYLASELTRVTNEWGVGDKIVACVTDNASNIVSALKDHLHWDHIPCFAHMLNL
IVRAALKEVQTILQKVKTIVEYFHRSTVASDKLKATQKQMGQEPLRLKQDVATRWNSTYY
MLKRFTEIKDPIISTLALTNASLPSLSPEEWNISREILDIIKPFEEVTTEVSAEKFVTAS
KVILMTRGLQRIVARYQRNPSSFDPVKKLVDALMSEMTKRFGRVEHIEKLADATCLDPRF
KKQAFVNHQAAEETVKRIIAAAAAINPAQSEEDTSDPGATASAGAMFWEDFDERVASLRP
SATSSKTSDAMMEMRAYLAEPLLPRTSDPLSWWRRCSPVYKSLSEVTKKRLCIVATSVPS
ERIFSKTGQIISDRRNRLSPSKVRELVFLNANMP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagaaaaaggagtgatgtttggtctcattttgtggcaactacagccactgaa
gcaaaatgcaacatatgcaaaaaaggtttttcaattaaaggaggaagcacttctaatttg
agaaggcaccttaaatctgcacatcctacggtgctgttatcacaagttagaacagagact
gaagatgatagccctgctgcagctggagcggtttctaccaccagcactttttctgctgga
cctttgactgctttagctggcacgctgaccacatctacagcatccagtacaccagcagca
gccaccatcatccaaggagcagttaggccaaggaggccacaacaacaaacttcaatgagc
agttttgtaacaagaccaatggatccattaagacaaagcaaacttgatgaggctctggtg
agaatgattgcttgtgactttcagccattttctatagtggaggacaagggctttaaggag
tattcacatcttctggacccgtcatacagtctacctagcagaaaaacattatcaaaaact
gtaatgcctaggctgtatgacaaattaagaagtgatataatggacaaaatcaagactgcc
tctgctgtttgtctcacaacagactgctggacctctttgactacaacaagttatatgact
gtgacatgtcatttcatagaggactttcagatgacctcctatctcctggactgctttgtt
ttgacagacagacacactgctgcttacctggcaagtgagctgacaagggttacaaatgaa
tggggtgtgggtgacaaaattgtagcttgtgtcacagacaacgccagcaacatagtttca
gccctgaaagaccatctccactgggaccacataccttgttttgcccatatgctgaacctc
attgtcagagctgcattgaaggaggtccaaactatattgcaaaaggtcaaaacaatagtt
gaatacttccacagaagtacagttgcttcagacaagctcaaggccacacaaaaacagatg
ggtcaagagccgttgaggttaaaacaggatgtggccacaaggtggaattcaacatattac
atgttgaaaagatttacagaaatcaaagatccgatcatctccaccctggcactaactaat
gcatctctgccaagcttgtcaccagaggaatggaacatttccagagaaatattggacatc
attaagccatttgaagaggtcaccacagaagtgagtgcagaaaagtttgtgactgcatcc
aaagtcattttgatgacaagaggtcttcagaggattgttgcccgatatcaaagaaatccc
tccagctttgaccctgttaaaaaactagtggatgccctgatgtcagaaatgactaagagg
tttggcagagtggaacacattgaaaagcttgctgatgctacttgcctggacccaaggttc
aaaaagcaagcttttgtcaatcaccaggcagcagaagagacagtaaagaggattattgca
gctgcagcagctattaacccagctcagagtgaggaggatacttcagatcctggtgcgact
gccagtgcaggggccatgttttgggaagattttgatgagagggtagcaagcttgaggcct
tctgctacctcttctaagacctcagatgcgatgatggagatgcgggcctaccttgcagag
ccactcttaccccgcacatcagaccctctgtcctggtggaggagatgttcacccgtttac
aaaagcctttctgaagtcacgaagaaaagactttgtattgtggccacatccgtgccatct
gaaagaattttttctaaaactgggcagattatatctgatagaagaaacagactcagccca
tccaaggtccgggagcttgtttttttgaatgcaaacatgccttaa
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