Carassius gibelio (silver crucian carp): 127962545
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Entry
127962545 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127962545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127962545
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127962545
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127962545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_11
zf-rbx1
zf_RING_Vps8
zf-UDP
PHD_NSD
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
127962545
NCBI-ProteinID:
XP_052418111
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All DBs
Position
B7:6361091..6370616
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AA seq
315 aa
AA seq
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MTVIKVKHVPTVPVKNLNGSSPVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKS
DIKPVPGLGHCCRKTTKKQARKGRTSEEVVRRYLQKVRNPPEEDCTICMESLCGPSGYKG
PGVGGISRAESVGRLCQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGK
MEYHVIPHSLPGHPDSKTIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRL
VLKLLLVAWDRRLIFSVGTSSTTGETDTVIWNEVHHKTEFGSNLTGHGYPDSGHLDNVLE
ELRAQGITEEECLRD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgactgttatcaaggtcaaacatgtccccaccgtcccggtgaagaacttaaatggatcc
agccctgtccatccagctttggcaggtatcactgggattcttatgagcgctgctggactc
ccggtctgcttgacccgcccacccaaacttgtgctccaccccccacctgtcagcaagagc
gacatcaaacctgtaccaggcctcggccactgctgccggaaaactacaaagaagcaagct
cgcaaaggtagaacttcagaagaagttgttagaagatatctccagaaagtccgcaaccca
cccgaggaggattgtacaatctgtatggagtctctctgtggcccatctggttataaaggc
ccaggtgtcggtggcatttctcgggcagagtcagtgggtcgtctgtgtcagtgtgggcat
cagtaccacctgcagtgcctggtggccatgtacaacaatggtaacaaagatggcagcctt
cagtgtcccacctgcaagaccatctacggtgttaaaaccggcaaccaaccaccaggaaag
atggaataccacgtcattcctcactcccttcctggacaccctgactccaaaaccatccgg
attatttacaacataccccctggcattcagggtccagagcatcccaaccccgggaagccc
ttcacagcccgtggatttccaaggcactgctacctccctgacagtgagaaaggccgtctg
gtgttgaagctgttgctggttgcttgggaccgccggctgatcttctcagtgggcacatcc
agcaccacgggcgagaccgatacggtcatttggaacgaggtgcatcacaagaccgagttt
ggctccaacctgaccggacacggttacccagactccggtcaccttgacaatgtcttggaa
gagctgagggcgcaaggcatcactgaagaagagtgtctgagggactga
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