Carassius gibelio (silver crucian carp): 127962580
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Entry
127962580 CDS
T08819
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9-like isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127962580
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127962580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
127962580
NCBI-ProteinID:
XP_052418152
LinkDB
All DBs
Position
B7:17575781..17640413
Genome browser
AA seq
2954 aa
AA seq
DB search
MTDPIMDFFDDSSIFGGGLDSLVQDDPGFTPGSVSLDDELHLGPSLEPLQVDAGSRSTTI
QHGIPYNQPVRHFDTMKAQTSMEQSFPGPEGGNNGRTFLPQQQSFQGHTMNQVPQTNGLF
LHNSPMWGNHDQKGNNYHQHNQNHQQIHHQHLQHKQFQQQQQFQQHQAQHQQYSHQHLQH
RPHSLNQHPVSNQLQVPHQQIAHQSLHHVVKTYQEPTGFYYESNVPQNHSQHGHHNSLSV
EGSPFHSTVEASIMPVSSQLHSGFQIAQGVQDFTTGPRLEDNGLAFPVQSSPATHSFPAD
SVSHASSYPTAHYTLTDQPPPIANSTQSYSSAPVSMTTSSMAIPSSASDLLDTGCPFLSN
SGMEHQQQRVQIPGSTAQRCPLNSSKSNQDTFSSSKVFPDGLNSFTADFPFSTAERRNHV
AAGPLVTNQSSSNGFQALEEVLLGEQHSHRLDLGDAPDLLADELLPQLEALDQDENSNHS
WVNIELEYEQEEDVKYDKGMEDVQMVYNAQPPKNTNGPSSQPRVLSPPVKSSSSSSSSSS
SYISVSEKRAQKRQQQQQQQQMEASLSDDKQQKANLIISEAIAKARERGEKNIPRVMSPE
SFPSSSSQHRSHRARSSKSRGKDKSSKKARIVTSSKSKQKAQIGKIIIKLGKKKRKKTDS
SEELSDDDRPTRRSSKDDDSKRRSNRKVKRKKYEDDGEARFSDEEMKVIVKAKKTNSSAQ
KQPSVQLFVENPTEEDAAVVDKIMASRVVKNEVSPGVMVETEEYFVKYKNYSYLHCEWAT
EQHLEKDKRIQQKIKRFKIKQAQRAHFFADMEEEPFNPDYVEVDRVLEVSYCEDKDSGEP
VVYYLVKWCSLPYEDSTWELNEDVDQTKIEEFKKLQAAKPHTNRVERPPASHWKKREQSR
EYCNGNCLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLDEICRTGIKGPFL
IIAPLSTIANWEREFRTWTKLNVIVYHGSVVSRQMLQQYEMYFRDAQGRVIRGAYRFQAV
ITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNT
VEELFSLLHFLEPNRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAP
KEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKG
AEEKILEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLD
ILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQ
SMSGRDNSLGGGGQMQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTK
TITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTVNGRNSLVIDTP
RVRKQTRPFSATKDELAELSEGESSGDDKPKLRRPHDRLNSYGRTECFRVEKNLLVYGWG
RWKDILAHGRFKRQLTERDVECICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRTKEL
QNHLGLSAPVPRGRKGKKMKTQSSSFDIQKAEWIRKHNPEHMLSDDGYKKHLKHHCNKVL
LRVRMLYYLKQEVIGVQCQKVLDGADASEIEIWVPEPDHSEMPALWWDMLSDKCLLLGVF
KHGYEKYNTIRADPALCFLEKVGRPDDKAIAAEQRGNDFMDGDVDDPEYKPAPALLKDDM
EDDASSPGDLVITDTGGVCLCVGAEGGSVLDGGGGTLGAGSGMYWPSPSALTARLRRLIT
ASQRFTKSKQILQIHQTQQAMTPAPYPLPPTISDTLNPKIAAKIERQQRWTRREEADFYR
VVSTFGVVFDPDLGCFDWTKFRAMARLHKKTDESLHKYLCAFIAMCRRVCRLPAIEGDMM
DSSLAIQPITEERASRTLYRVELLRKIREQVLRHPQLYERLALCQPGPDLPVWWETGSHD
RDLLLGAAKHGVSRTDYHILRDPELCFMAAQRNYSQNKGTAAQVQAQNQAPSLGQCHIPT
PLQHFQTKEASASPLPNQTELKEEPLSEGEEESGEQNPKTETPSIRPPTPSGVDEKDDIP
KVGENESRMVAARTKPLTPNSVTRKQKKLSKRSRREARRGSGSDSDSDGSSSSSSSSSSS
RSSSSSSSSSRSGSSSSTSSSSCSSGSSSSSSSSSSSSEDSDSEEVPKNASAVPGVKGFD
EDSVASLNTTQDDMQDSHVTNGISNPPHPFQGGYMLAASYWPKDRVMINRLDSICQAVLK
GKWPGVRRAYEGNAVTSFYTTKLLDNTTPLTEDPSASPQGSKVKKHVADREKEFSVKIND
QEGSLKLTFQKQGFPLKRPLEGEEGPLAQQQYLARLQELQNASDTSLADYTKTQNNYPQV
LPEQMRLNGVMDGQPVIKKRRGRRKNVEGMDLLFMNRNRPPLMADQSPAGWSSSVASTSA
PPGLSTPQGPSTLDTECRVPVISLKDGTRLAGEDAPKRKDLDQWLKEHPGFVADVGAFIP
TANKLQFQDGRPKQKRHRCRNPNKIDINSLTGEERVQIINRRNARKIGGAFAPPLKDLSR
FLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNALAKATTMT
NASANAALGLNPLLTNGLLAGLDLPSLQALQHNLQSLQSLQLTTGLMGLPHDPTNMATMF
PMMLSGMTGLPNLLGMSGILGQQDAAGVALTSDEDGKKKSGGEAATHKGSAETLSPDGKA
ERTEGQSSKATTSTAANSNQTSASASGHPLALNPLLLSSMLYPGMLLTPGLNLPVANQPQ
AANTQPTPPLQPAASEATAQLPGRSEDKDSDEGEEPDEKKDTSGPEGSAKAESSSSESDS
SSESSEDSDSSDED
NT seq
8865 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccatcatggacttctttgatgactctagcatatttgggggagggcttgac
agcttagtccaggatgatccagggtttactcctggttctgtgtccttggatgatgaactt
cacctgggtcctagtttggagcctcttcaggtggatgcagggtccagatctactaccatc
caacatgggataccctacaaccaacctgtgaggcattttgacactatgaaggcacagacc
tcaatggaacagtcctttcctggtccagaaggtggcaacaacggaagaacatttttgcca
cagcagcaatcatttcaagggcatactatgaaccaagtgccccagaccaatggactgttt
cttcacaacagccccatgtggggaaaccatgatcaaaaagggaataactaccatcagcac
aatcaaaaccatcaacaaattcatcatcaacatcttcaacacaaacaatttcagcagcaa
caacagtttcagcaacatcaagctcagcatcagcagtacagtcatcaacatcttcagcat
agaccgcacagcctcaatcaacacccagtttcaaaccagctgcaggtccctcaccaacaa
atagcccatcaaagcttgcatcatgttgtcaagacctatcaggaacctactggtttttac
tatgagagcaacgtccctcaaaatcattcccagcacggccaccataactcgctcagtgta
gagggtagtccctttcactctacggttgaggcctcaattatgcctgtgtcttctcaacta
cacagtggctttcaaatagcccagggggtccaagattttactacaggtccgaggttggaa
gataatggactggcctttcctgtccagtcttcccctgcaacccattctttcccagctgac
tcagttagccatgcttcatcctatcctactgcccattatactctgactgatcagcctccc
cctatagctaattcaacccagtcttactcctctgccccagtctctatgacaacctcttca
atggccatcccatcgtcagcttcagaccttctggatactggttgtcctttcctgtctaat
tctggaatggaacatcagcagcaacgagtccaaataccaggcagtacggcacaacggtgt
cccttaaatagttccaaatcaaaccaggataccttcagctcttctaaggtgttcccagat
ggtctaaactcattcactgcagactttccattctctacggcagagcgaaggaaccatgtt
gcggctggacctttggttacaaaccagagcagcagtaatgggtttcaggcactggaggag
gtcttgcttggagagcaacacagtcacagacttgacctgggtgatgctcctgacctttta
gcggatgagctgttgcctcagttggaggcactagaccaagacgagaactccaatcactct
tgggtaaatatagaactagagtatgaacaagaagaggatgtcaagtacgataaaggcatg
gaggatgtgcaaatggtttacaatgcacagcctcctaagaacactaatggtcccagcagc
caaccgcgggtactcagcccaccagtgaagagcagctcctcttcttcctcttcatcatcc
tcatacatatccgtgtcagagaagcgggcacagaagcgacagcagcagcagcagcaacag
cagatggaggcgtccctttcggacgataaacaacagaaggccaatctaatcatctcagag
gccatcgccaaagcacgagagaggggagagaaaaatattccacgcgtcatgagtccagaa
agcttcccgtcttcttcgtcgcaacaccgcagtcacagggcccgttcttccaagtccaga
ggcaaggataagagttccaagaaggcccggattgtgacgtcatccaagtccaaacaaaag
gctcaaattgggaaaatcattataaagcttggaaagaagaagcgaaagaagactgattcc
tctgaagagctttctgatgatgacagaccaactcgacgatcctctaaagatgatgattcg
aagcgtcgttcgaaccggaaggtcaagaggaagaagtatgaggatgatggtgaggctcga
ttttctgatgaagagatgaaggtcatcgtaaaagccaagaagaccaactccagtgctcaa
aaacagccttcggtgcaactgtttgtggagaacccgactgaggaagatgctgctgtggtt
gataaaatcatggcatctcgtgtggtgaaaaacgaggtttctcctggggtgatggtagaa
actgaagagtattttgtcaagtacaaaaactactcgtatcttcactgtgagtgggcgaca
gagcagcatttagagaaagacaagaggatccagcagaaaatcaagcgcttcaagatcaaa
caggcgcagagagcacacttctttgctgatatggaggaggaaccgttcaatcccgactat
gtagaagtggaccgagttcttgaggtctcgtactgtgaggacaaggactccggagagccg
gtggtgtattacctggtgaagtggtgctcattgccatatgaggacagcacatgggagctg
aatgaagatgtagaccagacaaagattgaagagttcaaaaagctgcaggcagcgaaacca
cacaccaacagagtggagcgtccaccggcgagtcactggaagaagcgggagcaatcccga
gagtattgtaatggaaactgtctcagggattaccagctagagggggtcaactggcttctc
ttcaactggtataacaggcgtaactgtattctggcggatgagatgggtctgggaaagacc
atccagtccatcacgtttctggatgagatctgtcgcacagggatcaaggggcctttcctc
atcatcgcccctctctctaccatcgctaactgggagagagaattcagaacctggacgaaa
ctcaatgtcatcgtgtaccatggcagtgtggtcagccgacagatgctccagcagtatgag
atgtacttcagagacgctcagggtcgtgtgataagaggtgcttaccggtttcaggcggtc
attacaacatttgagatgatattgggaggctgtccagaacttaacgcaatagactggcgc
tgtgtcatcattgatgaagcccatcggcttaaaaataagaactgcaagctactggagggc
ttcaaacttatgagtctggaacataaggttttgttgacgggcactccactacaaaacaca
gtagaggaactctttagtctgctgcacttcctggagccgaaccgcttcccttctgaaagc
accttcatgcaggaattcggagacctcaagactgaggagcaggtccagaaactccaggcc
atcctgaaaccgatgatgctgcgtcgtctaaaggaagacgtggagaagaagttggctcct
aaagaggagaccatcattgaagtggagctcaccaacatccagaagaagtactaccgcgcc
atcctggagaagaacttctcattcctggctaagggagctggccaagccaacgtcccaaac
ctgctcaacaccatgatggaactgcggaaatgctgcaaccatccctacctcatcaaaggg
gctgaagagaagatcttagaggacttcaaggaggtgtatagccccgcagccgtagatttc
cacctgcaggctatgattcagtctgcaggtaaactcgttctcattgacaagctgcttccc
aagatgaaggccggtggacacaaagtgctcatcttttctcagatggtgcgctgcctggac
atcctggaagactacctcatccagagaagatacctctatgagcggatagacggccgtgta
cgtgggaacctccgtcaagcagcgatagaccgtttcagtaaaccagactcggatcgattc
gtcttcctgctgtgtactcgagcaggtgggctcggtattaacctcacagctgctgacacc
tgtatcatctttgactctgactggaaccctcagaacgacctgcaggctcaggctcgctgc
cacaggattggtcagaataaagcagtaaaagtatatcgactaatcacacgtaactcatat
gagcgagagatgttcgatagagccagtctaaagctgggactggataaagctgtgcttcag
agcatgagcgggcgagacaacagtctaggaggaggagggcagatgcagcagcagctctct
aagaaggagattgaagatcttctgcggcgtggagcttatggtgccatcatggatgaggaa
gatgagggggctaaattttgtgaagaagacattgaccaaatcctgcaacgcagaaccaag
accatcactattgaatctgagggtcggggctccaccttcgccaaggccagttttgttgct
tcagggaacagaacagacatctctctggatgaccccaacttctgggacaagtgggctaag
aaagcagagattgacatggatacagtcaatggcagaaacagtctggtgatcgacacccct
cgtgtcaggaaacagacccggccgttcagcgctactaaggacgagctggccgagctctct
gaaggggagagtagtggagatgacaaacccaaactccggcggccgcatgaccgcctcaac
agctatggccgcacagagtgcttccgagtggagaaaaatctgttggtgtacgggtggggc
cgctggaaggacatcctggctcatgggcgctttaagcgtcagctgaccgagcgtgacgtg
gagtgtatatgcagagcactcctggcatactgcctcgttcattaccgtggagatgataaa
atcaagagcttcatgtgggatctgatcgctcccacagaggacggcaggaccaaggaactt
cagaaccatttgggtttgtcagctccagtgccacgaggcagaaaaggaaagaagatgaag
actcagtctagctcatttgatatccagaaggcagagtggatacgaaaacacaacccagaa
cacatgttgtctgatgatgggtacaagaaacacctgaaacaccattgcaacaaggtgctg
ttgagggttagaatgctgtactatttgaaacaagaggtgattggagtgcagtgccaaaaa
gtgctggatggggcagatgccagtgagatcgagatctgggttcctgagccggatcattca
gagatgcctgctctgtggtgggacatgctctcagacaaatgtctgctgttaggagtcttt
aagcacggttatgagaagtacaacactattcgtgcagatccagcactgtgtttcttagaa
aaggttgggcggccagacgacaaggccatcgctgcggaacaaagaggaaatgactttatg
gatggagatgtggacgaccctgagtataagcctgctccagctttgctgaaggatgatatg
gaggatgatgcttcttccccaggagacctggtcatcactgatacaggcggagtgtgtttg
tgtgttggtgcagaaggaggatctgtattagatggtggtggtgggactttgggtgctgga
tcagggatgtactggccctcaccctccgcgctgacggctcgactgcggcgtctgatcact
gcttctcagcgcttcaccaagagcaaacagatacttcagatccaccagacacagcaggcc
atgacccctgccccctaccctctgccccccacgatcagcgacacactcaatcccaaaatt
gctgctaagattgaaagacaacaacggtggacgcggagagaggaggcggatttctatcgt
gtggtttcaacatttggggttgtgtttgatccagatttgggctgctttgattggaccaag
ttcagagccatggctcgactgcacaagaaaacagacgagagtctacacaagtacctttgt
gcctttattgccatgtgcaggagggtctgccgcctgcctgctatagagggagatatgatg
gactcctctcttgctatacaaccaatcacagaggagcgtgcctcccgtaccttatacaga
gtggagttgctgcggaagataagagaacaggtgttgcgtcacccgcagctttatgagcgt
ctcgcactgtgccagccaggacccgatcttccagtgtggtgggaaacaggatcccacgat
cgggatcttctgcttggggcagccaaacacggagtcagccgaacagactaccatatcctc
cgtgacccggagctctgctttatggcagcacagagaaactacagccagaacaagggaact
gcagcacaagtgcaagcccagaatcaggcgccttcactgggacagtgtcacatcccaacc
cccctccagcattttcagactaaagaggcttctgcttcaccactcccaaaccaaactgag
ctgaaggaagagcccctgtcagagggagaggaagagagtggagagcaaaatcccaagacg
gagacaccctctatcagaccacccacaccttcaggagtggatgagaaagatgacatcccc
aaagtgggagagaacgagagccggatggtggcggccagaacaaaaccactcacgccgaac
tcagtaactcgaaaacagaagaagctgagtaagcggagccgcagggaggccaggaggggg
tcgggatctgactcggactctgatggctcctcatccagctcttcgtcaagttcttcatca
agatcttcttcctcatcctcatcttcgtcacggtctggaagcagttcctcgacttcgtct
tcctcctgttcttcaggctcttcgtcttcatcatcatcatcatcctcgtcttcagaagac
agtgacagcgaggaggtaccaaagaacgcgtccgcagtgcctggtgttaaaggctttgac
gaagacagcgttgcctctctcaacactacacaagatgacatgcaggacagtcatgtgacc
aacggtatctctaaccctccccaccctttccagggaggttatatgcttgctgcctcctac
tggccaaaggaccgtgtcatgataaaccggttggacagtatatgtcaggcagtgttgaag
gggaaatggccaggggttcgtcgcgcatacgaaggcaatgcagtgacttctttctacacc
accaaactcctggacaacacaaccccgctcacagaagacccttcagcctcccctcagggt
tcaaaggtgaagaagcatgttgcagacagagaaaaggagttctcagtcaaaatcaatgac
caggagggcagccttaaactgaccttccaaaagcaaggttttcctctgaagcgccccctg
gagggagaggagggacctcttgcccagcagcagtacttagcccggcttcaagagttacag
aacgcatctgacaccagcctggcagactacaccaaaacacagaacaactatccacaagta
ctgccagagcaaatgcgactgaatggagtaatggacggacagcctgtaataaagaagaga
agagggcggcggaagaatgtagagggcatggacctgctgttcatgaacagaaacagacct
cctctgatggcagaccagagtcctgctggctggagtagcagtgtggccagtacatccgct
ccccctgggttgagcacacctcaggggcccagcacccttgatacggaatgccgtgttccc
gtcatcagtctcaaagatgggacacgactagccggagaagacgctccaaagcggaaagat
cttgaccagtggcttaaagagcacccaggcttcgtagcagatgtaggagcctttattcct
accgcaaacaagctgcagtttcaagatggcagaccaaaacagaagagacatcgctgcaga
aacccaaacaaaattgacatcaacagcctaactggagaagagcgagtacagatcatcaac
aggcgaaatgctcgcaagattggtggtgcatttgctcctccgctgaaagatttaagccgg
ttcctgcaggagaatccagagtatggtgtcccaccagagtgggctgacgttgttaaacag
tctggttaccttcctgaaagtatgtttgaccgcatcctgaccggccccattgttcctgaa
gaagtgagccggcgaggacgacgtcccaaaaacgctttggctaaagcaaccaccatgacc
aatgccagtgccaacgccgccctggggctcaacccactcctgaccaacggcctcctcgcc
gggctggacctgcctagtctccaagctcttcagcacaacctccagagcctccagtctctc
caactcaccaccggcctcatgggactgcctcacgaccctaccaacatggccaccatgttt
ccaatgatgctgtccggaatgaccgggctgccgaacctcctcgggatgagcggtatcctc
ggacaacaggacgcggcaggtgtggctttgacgagcgacgaggacgggaaaaagaagagc
ggtggagaggccgccacacacaaagggtcggctgagactttgagtccggatggcaaagct
gaaaggacagagggtcaaagctccaaagccaccacctcaacagccgccaactccaatcaa
acaagtgcttctgcttcaggccacccactggccctcaacccccttctcctctctagtatg
ctctacccagggatgcttcttacgccaggccttaacctgcctgtggccaaccagccgcaa
gctgcaaacactcagccaaccccaccactgcaacctgctgcctctgaagccacggcgcag
ctgcccggccgctcggaggacaaagacagcgatgagggggaggagcccgacgaaaagaag
gataccagtggtccagagggctcggcgaaggcggagtcatcctcctccgagtccgacagc
tcctccgagtcatccgaggattccgattccagcgacgaagactga
DBGET
integrated database retrieval system
