Carassius gibelio (silver crucian carp): 127962745
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Entry
127962745 CDS
T08819
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127962745
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
Others
127962745
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
InlK_D3
DUF6786
Motif
Other DBs
NCBI-GeneID:
127962745
NCBI-ProteinID:
XP_052418376
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All DBs
Position
B7:19597163..19761399
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AA seq
1156 aa
AA seq
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MKALIMAVLAHLYPAVFLACAWMSLFGPTSCHTGVINQREFRDRELDSRGVHVTGRDEAL
ISAHSRGDYGGDPGGPRVRRASTPEKVSLLSSSFVLKGDATHNQAMVHWTGENSSVILIL
TKYYHADSNKVLESSLWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVILVSSSIN
ERDQMLFISTDEGSSFQRQPVSFTVDTLLFHPSEEDKLLAYSKEAKLYISTDLGHKWTLL
QERVTKDRVFWAVTGVDVDPDLVHMEIQDIGGGYLYVTCLIQNCSDKMVTAQFLGKIDHN
SLSVQDEYIFVKVTTGNRTKFYISYRRNEFVQMRFPKYALPKDVQIVSTDENQVFLALQE
WYQTDTYNLYQSDPQGVYYSIVLENVRSTKQPEEKVLIDILEVRGIKGVFLANQKIDGKV
KTLITYNKGRDWEPLAPPTTDMNGKAVSCKQPDCHLHLHLRWADNPYVSGTVHTKDSAPG
LIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKI
LKFSTDEGQTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQLF
PRQCTEADYDSWKLTDLQREKCIMGQERMYRRRKESSFCIKGKSYTSALTAKPCQCTEKD
FACDYGFERAPSLRLEGDRCYPDFWHDPDAPPENCHMGNSYKSSTGYRKVISDVCEGGLN
KEQSAKQHSCPLLPPRGLQLGIKGQMLAVAPGDDITFIVHQEQGDTTSTRYQVDLMDGVR
AIYENLTVTDEPIQHRYEKPGVYRVNVKAENSAGHDQAMLYIQVTAPLQDVHLEVVPIAG
RNQEVNLTAIVLPTEANLTVFYWWIGDNLQPKLTLENSLITRFSEEGEVPVTVQASNGRS
MVQDSKTVIVYDHFQVIPLSFSRNLDRFNPNIPEWRRDVGQVVTKILAKLTGVPQDSLVT
MVKPGLPTTADLYVLPQESTPVKRSVFVDKRVPTIKQVLSENNVSFIVRGGLRVLVTLAD
SDRGSRLAAAGPGVWALAVFLLISLISAAAFILFKFKRKNYKNHGSLLRPKESSLTHPWL
RFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLGNAGGNHSG
VVLSINSRELHSYLTS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctcatcatggcagttttggcgcacctgtacccagctgtgtttttggcttgc
gcgtggatgtcactgttcggaccgacatcctgtcacacgggcgttataaaccagagagaa
ttccgggaccgagagcttgacagccgcggcgtgcatgtcactggcagagatgaagctctt
atctcagcgcacagccgcggagattacggcggggaccccggcggaccccgcgtccggagg
gcttcgactccggagaaagtctctctactcagcagctctttcgtcctcaaaggggatgcc
acccacaaccaggcaatggtccactggacgggggaaaatagcagcgtcatcctcattctc
actaaatattaccatgcagactccaacaaagttcttgagagttctctttggagatccagt
gattatgggtcaacctacaccaagctcaacttgatgcctgggacaaccatcatagtcaca
aacttctacatctgtcccaccaataagaaaaaggtgatcttggtgagctccagcatcaat
gaacgtgaccagatgctcttcatcagcacagatgagggttcatccttccaacgacagcct
gtctccttcactgtggatacactcctctttcatccatctgaggaagacaaacttctggct
tacagcaaggaggcgaagctgtatatctccaccgatctgggtcacaaatggactctgctt
caggagcgtgttactaaagacagagttttctgggctgtgacgggggtggatgtggatcct
gatctggttcatatggagattcaagacatcggtggtggatacctttatgtgacatgtctc
atacaaaattgctctgataaaatggtgacagcacagttcttggggaagattgaccacaat
tccctgtcagtgcaagatgaatacatatttgtgaaggtaactacaggaaatcgaaccaag
ttttacatctcatatcgaagaaatgaatttgttcagatgagattccctaaatatgccctt
ccaaaggatgtgcaaattgtgagtacagacgagaatcaggtattcctggctctgcaggag
tggtatcaaacagacacgtacaacctctaccagtcggatccacaaggagtctattactcc
attgtgttggagaacgtccgcagcaccaagcagcccgaagagaaagtcctcatcgacatc
ctcgaggttcgtggcatcaagggcgtattcttggccaatcaaaaaatagatggaaaagtg
aagactctcattacctacaacaaaggcagagactgggaaccactggctcctcccacaact
gatatgaatggcaaagctgtcagctgcaagcagcctgactgtcacctccatctccacctg
cgatgggctgacaacccgtatgtgtctggaacggtccacactaaagattctgccccaggc
ctcataatgggtgcaggtaaccttgggtctcagctggttgaatataaagaggagatgtac
atcacctcagactgtggcaagacctggagacaggtttttgaagaagagcatcacattctc
tatctggatcatggcggtgtcatcgtggccattaaggacacctcaatccccttaaaaata
ctcaagttcagcacagatgaaggacagacatggagcatccacaacttcaccagcacttct
gtatttgtggatggacttttgagtgaacctggagatgagacactggttatgacggtattt
ggccacataagttaccgttcggattgggagctggtgaaggtggatttccgacagttgttt
cccaggcagtgcacggaagctgattatgactcctggaaactcactgacctacagagagag
aaatgcatcatgggccaggagcgaatgtacaggaggaggaaggagtcatcgttctgcatt
aaagggaagagctatacatcagctttaacagctaaaccttgccagtgcactgagaaagac
tttgcctgtgactatggctttgagcgtgctcccagcctccggttagagggggatcgctgt
tatcctgacttctggcatgatcccgacgctccacctgaaaactgccacatgggaaacagc
tacaagtccagcacaggttaccggaaggtcatctctgatgtttgtgagggtggcttgaat
aaagaacagagcgcgaagcagcattcctgccctctgctgccccctagaggtctgcagctg
ggcatcaaaggacagatgctggctgtggcacctggggatgacatcacttttatagtccat
caggaacagggtgacaccaccagcaccagatatcaggtcgatttaatggatggcgtcagg
gctatatatgaaaacctgactgtcacagatgaacccattcagcaccgttatgagaagcca
ggtgtttaccgtgtcaatgtgaaggctgaaaactctgctggacatgaccaagccatgctt
tacatccaggtcacagctcctcttcaagatgtccatctggaggtggttccaatcgctggc
agaaatcaagaagtaaatctcacagctatagtgctgcccactgaggcaaaccttaccgtg
ttttactggtggattggagataaccttcagccgaagctgaccctggagaacagtctgatt
acaaggttctctgaggagggggaagttcctgtcacagttcaggcttctaatggtcgatcc
atggtacaggacagcaagactgtcattgtctacgatcatttccaggtgatccctttgagt
ttcagtcgtaatttggatcgctttaacccaaacatccccgaatggagacgagatgtggga
caagtcgtaaccaagattctcgcaaagctcacaggggttcctcaggactctttggtgacc
atggtgaagcctggtcttcccaccactgcagacctctatgttcttcctcaagagagcact
ccggtgaagaggagtgtgtttgtggataagcgggttcccactataaagcaggttctgagt
gagaacaacgtgagcttcattgtgagaggagggttaagagtattggtgactctggcagac
tcggatagaggttctcgtctggctgcagcaggtccaggtgtttgggctctagctgtcttt
ctcctcatcagtctgatctctgctgcagcattcatactcttcaagtttaaaaggaaaaac
tacaaaaaccatggttccttgctgaggccaaaggagagcagcctaacgcatccctggctg
cgtttcagaaaactgccaggacgaaacgtctatgcccagatgcacaatgagaaggagcag
gaaatgaccagccctgttaatcacagtgaggacacacagaatatcattcaaggcgaggag
ttcatcgatgacgaccttgactcgcagacactaggtaacgctggaggcaaccactcagga
gtggtgttgagcataaattcaagggagctgcacagttacctgaccagctga
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