KEGG   Carassius gibelio (silver crucian carp): 127962858
Entry
127962858         CDS       T08819                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
cgib04144  Endocytosis
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127962858
   04145 Phagosome
    127962858
   04140 Autophagy - animal
    127962858
   04137 Mitophagy - animal
    127962858
   04148 Efferocytosis
    127962858
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127962858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127962858
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127962858
   04031 GTP-binding proteins [BR:cgib04031]
    127962858
Membrane trafficking [BR:cgib04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    127962858
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127962858
  Exosomal proteins of other body fluids (saliva and urine)
   127962858
  Exosomal proteins of colorectal cancer cells
   127962858
  Exosomal proteins of bladder cancer cells
   127962858
GTP-binding proteins [BR:cgib04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    127962858
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA ATP_bind_1 cobW PduV-EutP Septin nSTAND3 AAA_7 NTPase_1 AAA_16 AAA_22 G-alpha AAA_24 ATPase_2 SRPRB AAA_5 ABC_tran ATP-synt_ab AAA_14 NACHT MCM
Other DBs
NCBI-GeneID: 127962858
NCBI-ProteinID: XP_052418414
LinkDB
Position
B8:complement(24989409..24996065)
AA seq 204 aa
MSSRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTSFKTMDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVDQAFQTIARNALKQETVE
TYDFPDQIKLRDDRPVSSSDGCSC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcctctcgtaagaaggtgctgctcaaagtgatcatcctaggggattctggagttggg
aagacctctctgatgaaccagtatgtgaataataagttcagcaatcagtacaaggccaca
atcggagccgacttcctgactaaggaggtgatggtggacgacagactggtcaccatgcag
atctgggacacggcgggacaggagcgctttcagtctctgggtgtggcgttttacaggggg
gcggactgctgcgtgctggtgtacgacgtcacagcgccaacttcattcaagactatggac
agctggagggacgagtttctcattcaggccagtcctcgtgacccggagaacttccccttt
gttgtgctgggcaacaaaatcgacctggagaaccggcaggtaacgacaaagcgagcccaa
gcgtggtgtcagagtaagaacaacatcccttatttcgagaccagtgccaaagaagccatt
aacgtggaccaggccttccaaactatcgctcgcaatgctctcaaacaggagacggtggag
acgtatgacttccctgaccagattaaactcagagacgacagacctgtgtctagcagtgat
ggctgcagctgctga

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