Carassius gibelio (silver crucian carp): 127962894
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Entry
127962894 CDS
T08819
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
cgib03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127962894
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127962894
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127962894
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127962894
03036 Chromosome and associated proteins [BR:
cgib03036
]
127962894
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127962894
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127962894
SWI/SNF complex
127962894
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127962894
PBAF complex
127962894
SWI/SNF complex
127962894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
127962894
NCBI-ProteinID:
XP_052418456
LinkDB
All DBs
Position
B8:complement(16729938..16733988)
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AA seq
373 aa
AA seq
DB search
MALSKTYGQKPIKFQLEEDGEFYMIGSEVGNFLRMFRGSLYKRYPSLSRRLATVEERKKI
VASSHDHGYTTLATSVTLLKASEVEEIFEGHDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENATQPEILVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQIESYPTDS
ILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagcaaaacatacggacagaaacctattaaattccagctggaggaggatgga
gaattttacatgattggatcagaggtggggaatttcttgcgtatgttcagaggatcttta
tataaacgctacccatcgctctcaagaagattagcgacagtagaagagagaaagaagata
gtagcatcctctcacgatcacggttacaccactttagccaccagtgtgacgctgctgaag
gcctcagaggtagaggagatatttgagggacatgacgagaaatataaggccgtgtccatc
agcactgaacctccggcttatctcagggagcagaaagccaagagaaacagtcagtgggtg
cccactcttcccaacagttcccatcacttggacgctgtgccttgctccaccaccattaac
cgcaatcgaatgggacgtgacaaaaaaagaaccttcccgctctgttttgatgatcatgac
cctgcggtcatccatgagaacgccactcagcctgagatcctggtgcccattcgactggac
atggagattgacggacagaagctgcgtgatgctttcacttggaacatgaatgagaagctg
atgactccggagatgtttgctgaaatcctttgcgacgatctggatctgagcccactgacc
tttgttccagccattgcctcggccatcagacagcagatagagtcctaccccacagacagc
atactggatgagcagatggaccagagagtcatcatcaagttaaacatccatgttgggaac
atatctctggtagaccagtttgaatgggacatgtctgagaaggagaactctcctgagaag
tttgctctgaagctgtgttctgaactgggcttgggaggagagtttgtcaccactatcgca
tacagcatacgcggccagctcagctggcatcagaggacctacgccttcagtgagaaccct
cttcccacggtggagattgccatccggaacacaggtgatgctgaccagtggtgtccactg
cttgaaacactgacagatgctgagatggagaagaagatcagggaccaggacagaaacaca
agacgaatgagacgacttgcaaacacggccccagcatggtga
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integrated database retrieval system
