Carassius gibelio (silver crucian carp): 127962911
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Entry
127962911 CDS
T08819
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127962911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127962911
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127962911
Membrane trafficking [BR:
cgib04131
]
SNARE
Syntaxin (Qa)
Stx-PM
127962911
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
127962911
Exosomal proteins of other body fluids (saliva and urine)
127962911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Spectrin_Anc-1
DUF6161
ODV-E18
EpuA
EcoEI_R_C
DUF3040
DUF2680
DUF2116
DUF6480
ETRAMP
Motif
Other DBs
NCBI-GeneID:
127962911
NCBI-ProteinID:
XP_052418470
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All DBs
Position
B8:18571671..18580384
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AA seq
309 aa
AA seq
DB search
MRDRLADLNEGRQNASEDGAVSVSMERDGFMQDFFRKVGEVRGVIDKISSQVNEVKKKHS
GILSAPNPDERTKEELEQLTIEIKKNANFVRTSLKSMQHNLPPEEQINQASVDARIQKTQ
YTNLSRKFVEVMTQYNEAQMSFREKSKSRIQRQLEITGRITTNEELEEMLETGNPSIFTS
DIISDSQITRQALNEIESRHKDILRLESSIKELHDMFVDMAMLVETQGEMIDNIEKNVNN
AVEYVGQAKVETKKAVRYQTQARRKHIILALIVLVVLAVVALIVGLSVGLSVKTNTNSAS
SSSNAANPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccggctggctgatttgaatgagggcaggcagaatgccagtgaagatggggct
gtctctgtgtccatggaaagagatggcttcatgcaggattttttcagaaaggtgggggag
gtcagaggtgtcattgacaagatctcctcccaggtgaatgaggtgaaaaaaaaacatagt
gggattctctcagccccaaaccctgatgagaggacaaaagaagagctggaacaactcaca
attgaaatcaagaaaaatgccaactttgtccggaccagcctcaaatcaatgcaacataat
ctacctccagaagaacagataaatcaagcctcagtggatgcacgcattcagaaaacacag
tacactaacttgtcacgcaagtttgtggaggtcatgacacaatataatgaagcccaaatg
tccttcagagagaaaagcaaaagcaggattcagagacagctggagatcactggaagaata
acaactaatgaggaattggaagagatgctggaaactggaaacccttctattttcacctcc
gatatcatctctgactctcagataactcgtcaggcccttaatgagatcgagtctagacat
aaagatatcttgcggctggagtccagcattaaagagcttcatgacatgtttgtggacatg
gccatgcttgttgagacccagggtgagatgattgacaacattgagaagaatgtaaacaat
gcagtagagtatgtcggccaagctaaagtggagaccaagaaagctgtgcggtaccagacg
caagcacgcaggaaacacattattcttgctcttattgttctggtggtgctcgctgtggtc
gcactcattgttggtttatctgtgggcctgtctgttaaaaccaatactaactccgcctcc
tccagctccaatgcagccaacccttcctaa
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