Carassius gibelio (silver crucian carp): 127962949
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Entry
127962949 CDS
T08819
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127962949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127962949
03041 Spliceosome [BR:
cgib03041
]
127962949
03032 DNA replication proteins [BR:
cgib03032
]
127962949
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
127962949
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
Sm proteins
127962949
U2 snRNP components
127962949
Complex B
U1 snRNP components
127962949
U4/U6.U5 tri-snRNP components
127962949
Complex C
U2 snRNP components
127962949
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
127962949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
127962949
NCBI-ProteinID:
XP_052418527
LinkDB
All DBs
Position
B8:16666072..16667649
Genome browser
AA seq
128 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTYRDGRVSQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQSAGAGRGKAAILKAQVAARGRGRGGPGRG
GNVFQKRR
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggagtgcccatcaaagttcttcatgaagcagagggacacatagtcacctgt
gagaccaacactggggaggtctacaggggcaaactgatcgaggctgaggacaacatgaat
tgtcagatggcaaacatcacagtcacatacagggatggccgtgtatctcagctggagcag
gtgtatattcgtggcagtaagatcaggttcctcatccttcccgacatgctgaaaaatgct
cctatgttaaagagtatgaagaacaaaaatcagtcggctggtgcaggtcgaggaaaagca
gctattcttaaagcccaagtggcagccagaggccgtggccggggtggaccgggacgagga
gggaacgtgttccagaagaggcgctag
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integrated database retrieval system
