Carassius gibelio (silver crucian carp): 127963143
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Entry
127963143 CDS
T08819
Name
(RefSeq) toll-like receptor 9
KO
K10161
toll-like receptor 9
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04620
Toll-like receptor signaling pathway
cgib05132
Salmonella infection
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127963143
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127963143
09171 Infectious disease: bacterial
05132 Salmonella infection
127963143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127963143
04090 CD molecules [BR:
cgib04090
]
127963143
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127963143
CD molecules [BR:
cgib04090
]
Proteins
127963143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
TIR
LRR_Zer-1
LRR_9
TIR_2
KdpD
Motif
Other DBs
NCBI-GeneID:
127963143
NCBI-ProteinID:
XP_052418849
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All DBs
Position
B8:complement(29807236..29812111)
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AA seq
1064 aa
AA seq
DB search
MFGHMFYLAFILNQFHLFATLHPEFYPCEIHTTKDGHINVDCQRRRLANVPKFTSLSVIS
LNLNENHIHHIKGATFSGLANLKHLSLMWNCVPDYLKELRWPSCSLKIDPNAFSGLKNLS
SLQLAGNSLKTIPPLPKQLEILGLEFNHIFHIVEPLGTPLLKQLLLNKNCFYANPCYQSY
FIDPRVFQGLPELLNLTLSYNNVTIVPPYLPLSLESLDLGENKITHINKESFANLKNLRH
LNLRWNCQRCDHASEPCFPCPNNQSLNLHPDAFLDQRDSLISLSLRGNSLHTIPQHLFAR
LHKLQVLDLSDNFLAYAIQNGTFYEELQNVVSLSLHYNYEPLQSFSELILSPSIEKMTAL
RELYLSGLFFRELSNYSLAPLIKLPRLESLELRMNFICSVSMDAISQLRTLRWVDLSQNM
LAFSSCFSTCTAEDISNNYQTLEKRGNGQLNLQTQKVILPSSELNTMQDPGENQCFFYYS
MWHFKKLICSKNLYFDLSQNNIPWLNASTFRGMEKVVCIDLSYNYISQTLNGQQFTDLSK
LAYLNMANNRIDLYSEKAFQEISGTLKALDLSKNEFHFVIKGMGHRFTFLPHLTSLQILS
LANNHIGLRISNILNSTSLKYLDFSGNRLDIMWDSRRNQYLHFFQGLTKLTHLDISENQL
KSFPPEVIVNLPPSLQMLRLDSNVLSYFPWGNISVLEKLCHLNLSSNRLSFLPNIHFELR
LVSLDLSHNRLVAIPKAFLSQAINLKNLMLNHNQLKILDVQALPLSFHTGYTFCPAGPHK
NKSSCKLVLHANPFTCSCVISGFAKFLRETSLDIPHLTTEVHCGFPESLAGVNVLSIDLH
SCQEIFGSVAFFCTLWLTLAATSIPLLKHLYGWDLWYCIQILWTGHKGHTPVNGGSMMDN
QYDAFVVFDTSNKAVRDWIYKEMVVRLENRGRWRFRLCLEERDWLPGVSCIENLHKAVYN
SRKTVFVLTSPNGCSHESGVVRQAFLLVQQRLLDEKVDVAVLVLLDFLFPKFKYLQMRKR
LCKKSVISWPKNPRVQPLFWNNLRVALVSDNVRAYNKNVTESFF
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacacatgttttatctggctttcatactgaatcagtttcatctttttgcaact
ttacatcctgaattctatccatgtgaaattcacactaccaaggatggacacataaatgtg
gattgtcagcgcaggcgtcttgctaacgtccctaaattcacatctctctctgttatatca
ctcaacttaaatgaaaaccatatacaccacattaaaggtgccacattttctggattagca
aatctcaagcatctcagtttaatgtggaactgtgtaccagattatcttaaggagctaaga
tggccttcatgcagcctgaaaatcgaccctaatgcatttagtggacttaaaaacctatct
tccctgcagttagcagggaacagcttgaagaccattcctcctctaccaaagcagcttgag
attctgggactggaatttaatcacatctttcatatagttgagcctctaggtacaccgcta
ctaaaacaactcctgctaaacaagaattgtttctatgccaacccatgttatcagtcttac
tttatcgacccacgtgtgtttcaaggtctccctgagcttctgaaccttacactgagttac
aacaatgtgaccattgttcccccatatcttccactttcactagaaagtctagacttggga
gagaacaagatcacgcatatcaataaagagtcctttgcaaatcttaaaaatctgcgacac
cttaacctaaggtggaattgccaaaggtgtgaccatgcttctgagccctgtttcccatgc
cctaacaaccagtctttgaatctgcacccggatgcatttttggatcaaagggactctcta
attagtttaagcctgcgaggcaattcactgcatacaattcctcagcatctcttcgcacga
ctccacaagctccaagtgttagatttatcagacaactttttagcctacgccatccagaat
ggcaccttttatgaagagctccagaatgttgtgtccctcagtcttcattataactatgaa
cccctgcaatccttttctgagttgattctgtcaccatccatagagaagatgacagctcta
cgagagttgtacctaagtggactattcttcagagaactgtcaaactatagccttgcacct
ctgatcaaactgccaagacttgagtccctagagctacgcatgaacttcatctgttctgtt
agcatggatgctataagccagctgagaacattaaggtgggtggacctttcccaaaacatg
cttgctttcagttcatgcttttcaacctgcactgctgaagacatatcaaacaactaccaa
acccttgaaaaacgtggcaatggacagctcaacttgcaaactcaaaaagtcatcctacca
agctcagagctgaacactatgcaggaccctggagaaaatcaatgttttttttattattct
atgtggcatttcaagaagctgatctgctctaaaaacctgtattttgacctctctcaaaac
aacatcccatggctgaatgcaagtacttttagaggcatggaaaaagtggtatgcatagat
ctgtcctacaattacataagtcaaactttaaatggccaacagtttacagatctaagcaaa
ttagcctacctgaatatggctaacaatcgcattgacctgtactctgaaaaggccttccag
gagataagtggcacactaaaagctcttgacctcagcaaaaacgaattccactttgtaatt
aagggcatggggcatcgcttcacattccttccacacttaacatctcttcaaatattgagt
ctagcaaacaatcacattggtctcagaatctctaacattcttaatagtacttctctgaag
tatcttgatttctctggaaatcgtttggacataatgtgggactctaggcgtaaccaatac
ctacatttctttcagggtcttactaaacttacacacttagacatttccgaaaatcagctc
aaatcattccccccagaggtaattgtaaacttgcctccaagcctccagatgctaagactg
gattccaatgtgctgagttatttcccttggggcaacatctcagttcttgaaaagctctgc
cacctgaaccttagttcaaacaggctttcattcttacctaatattcattttgagctccgt
ctcgtaagcctggacctaagtcacaatcgactagttgcgatcccaaaggctttccttagt
caggcaataaatcttaaaaacttaatgcttaatcacaaccagctgaagatccttgatgtg
caggctcttcccttgtcattccatacaggttatacattctgtcctgctgggccacataaa
aataagtcatcctgcaaactcgtgctgcatgccaatccttttacttgtagttgcgttatc
tctggatttgcaaaatttctcagagaaactagtttggatatcccacacctcaccacagag
gttcactgtggttttccagagtcattggctggtgttaatgtcctttcgatagatcttcac
tcatgccaggagatatttgggagtgttgctttcttctgtactttatggttgacattggca
gcaaccagcattcccctcctgaagcatctctatggttgggacctgtggtactgcatccag
attttatggactggtcacaagggacacactccagttaatggcggcagcatgatggataac
caatacgatgcatttgtggtatttgatacgagtaataaggcagtcagggattggatctac
aaggagatggttgtgaggttggagaacagagggagatggcgctttcgactttgtctagag
gaacgcgactggttgcctggagtgtcatgcatagagaatctccacaaggccgtttacaac
agcagaaagaccgtgtttgtattgactagccctaatggctgttctcacgaaagtggagtc
gtccgacaagccttcctccttgttcagcagcgccttctagatgagaaagtggatgttgca
gttctagttttgctggactttctttttccaaaattcaaataccttcagatgagaaaacgg
ctctgcaaaaaatctgttatatcctggcccaagaacccacgagtgcagccgctcttttgg
aataatttacgtgtcgctcttgtctctgacaatgttagagcctacaacaaaaatgtcaca
gagagctttttctaa
DBGET
integrated database retrieval system