Carassius gibelio (silver crucian carp): 127963165
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Entry
127963165 CDS
T08819
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127963165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127963165
03036 Chromosome and associated proteins [BR:
cgib03036
]
127963165
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127963165
mRNA degradation factors
5'-3' decay
Decapping complex
127963165
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127963165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
127963165
NCBI-ProteinID:
XP_052418882
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All DBs
Position
B8:complement(28560882..28566954)
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AA seq
451 aa
AA seq
DB search
MHSARMECVNKAGQLMSLAALQQHDPYIVNLLDVAGQVALYTFNSKANEWEKTEIEGTLF
VYARSASPHHGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKADC
QRIAQLMLQIVKQEALRGSPDRGPSSRTNGCVQSRPTDILELLSKAKEEYQRSQSSDTDV
QGSSEAALSLEKREEVTAAQHEKSGPSVKQITVEELFGSSLSREVSQSSSSSVGEGKRGP
VFAPLCPSVEPLLAPRLSADPGAPALVSLFQSCGTRDPRPAASNTEERSSGPSVQRGSAA
YRSPLTDGFMPGPLVTPQSFRESTCKLPGPFTGKTALSAPVNTPSSVFMSKEAHAFTPSS
TRVKPLPAGPAVQGEESSLLLSPNVFQHSVIKTAEPLKIPASPTSPSADLYSRTQLRDTL
IHLIKNDGRFLSAIHEAYTQSLSKGLNNIKL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgcaaggatggagtgtgtgaataaagcgggtcagctcatgagtctggcggct
ctacagcagcatgacccctacatagtgaacctgctggacgtcgccggacaggtcgcgctc
tacaccttcaactccaaagcgaacgaatgggagaaaactgagattgaaggcactttattt
gtgtatgcgaggtctgcatctcctcatcacggcttcacaatcatgaaccgtctcagtaca
gagaacctagtggagccgatcaataaagaccttgagttccagctgcaggaccctttcctc
ctctacaggaacggaaacttgggcatctacagcatctggttctatgataaagccgactgc
cagcggatcgcacagctcatgctgcagatagtcaagcaggaggcgttgcgagggtctcct
gacagaggtccgagcagcaggaccaatggctgtgttcagagcagacccacagatatcctg
gagctgctcagcaaagctaaagaggagtatcagaggagtcagtcgtctgacacagatgtt
caggggagctcagaagctgctctgtctctggagaagagagaagaagtcaccgctgctcaa
cacgagaagtccggtccctcggtgaagcagatcacggtggaagagctcttcggcagctct
ctgtccagagaagtgtcccagtcgagcagctcctctgtgggagagggcaagcgtgggcct
gtgttcgcccctctgtgtccctcggtggagcccctcctcgctcctcgtctgtctgctgac
ccaggagccccggcgctggtctctctcttccagagctgtggcacccgagaccccagacca
gccgcttcaaacacagaggagaggtccagcggtccgtctgtgcagcgaggttcggctgcg
tacaggagtcctctcacagatgggttcatgcccggcccgctggtcaccccacagagcttc
agagagtccacctgcaaacttccaggacccttcacgggaaaaactgcattatctgctccg
gtcaatacaccgagcagcgtcttcatgagtaaagaggcgcatgcgttcacaccgtcctcc
actcgggtcaaaccccttccagcggggccagctgttcagggggaggagtcttcactgctg
ctgtctcctaatgtgttccagcactcagtgatcaagacagccgagcctctgaagatcccg
gcgtcccccacgtctccctcagcagacctgtacagtcgcacccagctcagagacacactc
atacatctcataaagaatgacgggcgtttcctcagtgcaatccacgaggcctacacacag
agcctctctaaaggcctcaacaacatcaagttatag
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