Carassius gibelio (silver crucian carp): 127963247
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Entry
127963247 CDS
T08819
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127963247
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
General mRNP proteins
127963247
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
127963247
NCBI-ProteinID:
XP_052418999
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All DBs
Position
B8:complement(21627237..21638556)
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AA seq
546 aa
AA seq
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MADDFDVEAMLEAPYKKGESKSSSADGRNEERSKKKRRSGSRSPSPGHRRSRSGGRKKSR
EQRRSRSRERKRSRSREHKRSRSRSKDRGGRYRGHKIPFMGPKLNGVPGGKTGPQHFTKH
SRRRSRSRSPFKKDRSPFKKDRSPFKKDRSPFKKDKSPVRQPIDNLSPEERDARTVFCMQ
LAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVDATSVPLAIGLTGQRVL
GVPIIVQASQAEKNRAAAMASMLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGI
QLMMDTETGRSKGYGFISFADAECAKKALDQLNGFELAGRPMKVGHVTERSDASSASSFL
DSDELERTGIDLGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGSVAFGNLANASTTQPL
IPNPGMNQAMNLPSQPLATHCLQLSNMFSPQAENDPGWDLEIKDDVIEECRKHGGIVHIY
VDKNSAQGNVYVKCPTIPVAMAVVGALHGRWFAGKMITAAYVPLPTYHNLFPDAATATEP
LRPMHR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgacgttgaggccatgctggaagctccttataagaagggtgaaagc
aagtcctctagcgccgatggtcgtaatgaggaacgcagcaaaaagaaaagacgcagcggt
agtcgtagtccgagtccgggtcatcggaggagtagaagtgggggccgcaagaagagccgc
gagcaacgcaggagccggagccgcgagcggaaacgttcacggagcagagaacacaagcgg
tcgcgatcccgcagcaaggatcggggcggacgttatcgtggacacaaaattccctttatg
gggccgaaattaaatggtgttcccggagggaagactggcccacaacatttcaccaaacac
agtcgcaggcgctctaggagcagaagcccatttaagaaggacagaagcccgtttaagaag
gacagaagcccgtttaagaaggacagaagcccgtttaagaaggacaaaagccctgtcagg
cagcccatagataatctgagcccagaggagagagacgcccgcacagtgttctgcatgcag
ctcgctgccagaatcagacccagagatctggaagatttcttctctgcagtgggaaaagtc
cgtgatgtaaggatgatctcggataggaactctcggaggtcgaagggcattgcctacatt
gagtttgtggatgcgacatcggtaccgctggcgatcggcctgacggggcagagggttctg
ggagtgcctatcatagtccaagcttcacaggctgagaagaacagggcagcagccatggcc
agcatgctccagagaggcggtgcaggacccatgcggctgtacgtgggctccctgcacttc
aatataactgaagacatgctcaggggcatttttgagccatttggaaagattgagggcatc
cagctaatgatggacactgagactggcaggtcgaaaggatacggattcatatcatttgca
gatgcagaatgtgctaaaaaagccctggatcaactaaatggtttcgagcttgcaggacgg
ccaatgaaggtgggtcatgttactgagcgttctgatgcctcatctgcaagctccttcctg
gacagtgatgaactggagagaactggcattgacttgggcacaacaggtcgacttcagctg
atggcaagactcgcagaaggtacaggactgcagattcctgctgctgctaagcaggcctta
cagatgagtggctctgtggcatttggaaatctcgccaatgcctcaaccacacaacctctt
attcccaatcctgggatgaaccaagctatgaaccttccaagtcagccacttgctacacac
tgcttgcagctctccaacatgttcagtccacaagcggaaaacgatcctggctgggacctg
gagataaaggatgatgtaatcgaagagtgcagaaaacacggaggcattgttcacatatac
gtcgacaagaactctgctcaaggaaatgtttatgtaaagtgtccaaccatcccagtagca
atggctgttgtcggcgccctgcacggccggtggtttgcaggtaaaatgatcacagcagcc
tacgtgcctcttcctacgtaccacaacctgtttccagatgctgccacagccacagagccc
ctgaggcccatgcaccggtga
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