Carassius gibelio (silver crucian carp): 127963658
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Entry
127963658 CDS
T08819
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127963658
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
127963658
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
127963658
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
127963658
NCBI-ProteinID:
XP_052419637
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Position
B8:complement(12291752..12298149)
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AA seq
563 aa
AA seq
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MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDTATPFLAEEGLTGLLANQGEAVGCYGDQVELSSEELLALDNEGRAV
ITQHHFIGKDGPQKLTVINVYCPRADPDKPERKQYKLQFYHLLQCRAEAILSSGSHVIVL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDHFLFGKTEKTENGNTEDDLTDISQIPASG
GKFVDSFRHFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSDHCLVKSVFMGADIMPEVE
GSDHCPVWAQLSCTLRSSPKCPPLCTRHMPEFIGRQQKLSRFFVKVSEKERFSKVSEESL
PGSQDSGEIRENLNPVGQGNSVAKKRPSCREKDANASKAKRSNQMKTEGNAKGNLLAFFK
PKQTSSISSIVNLSPKQTKSSKDSPGSESEVRSCPSDVQTETNLSLVTEMETENMDEVEA
ESTSIVKSKDCKKGPCTGFWKAVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCA
RPQGHASNPQARCNFFAWVDKGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaacttggaatataaacggcatacgaacgtttaaaaatggcatcaagaaa
attttggattcattcgatgcagatataatctgcgtccaagagactaaagttacccgtgac
ctgttggatgagaagacagcaattgttgatggctacaattcatactttagttttagccga
ggacgaagtggatactcgggtgtagcgacctactgtaaggataccgctactccattcctg
gctgaggaaggattgacaggtctgttggccaatcagggagaggctgttggttgctatggt
gaccaggttgagttgtctagtgaggagcttctggcgctggacaatgaaggaagggctgtc
atcacccagcatcacttcattggcaaagatggaccacagaagctgaccgttatcaatgtt
tattgtccacgagctgatccagacaaacctgagagaaaacaatacaagctccagttttac
catctcctccaatgcagagctgaagccatcttgagctcagggagtcacgtgattgtattg
ggagatgttaacacttctcatcgacccatagaccactgtgacccagatgatgtggataac
tttgaagataatccagggaggaagtggctggatcattttctgtttggaaagacagaaaag
accgaaaatggaaatactgaagatgacctcacagacatctcccagattcctgcctctggt
ggcaagtttgttgactccttccgccatttccacccaaagcgctccaatgccttcacgtgc
tggtccacgcttactggggccaggcagaccaactatggtacacggattgactacatcttt
tctgaccactgtctggtgaaatctgtctttatgggcgcagacattatgccggaggtggag
ggatccgatcattgtcccgtatgggcacagctcagctgtactctccggtctagtcccaag
tgcccaccattgtgcacacgtcacatgccagagttcattggcagacagcagaaactctca
cgcttctttgtcaaagtttcagagaaagagaggttttctaaagtctctgaagagagtcta
cctggatcacaggattctggggaaatccgggaaaacctgaatcctgtaggacagggaaac
agtgttgcaaagaagagaccttcatgtagagaaaaagatgcaaatgcatccaaagccaaa
agaagcaatcagatgaaaactgaaggcaatgctaaaggaaatcttctagctttctttaag
cctaaacaaacatcatcgatttcttctattgtaaacttgagcccgaaacagacaaaatcc
tctaaggatagcccaggtagtgagagtgaggtcagaagctgccctagcgatgtgcaaact
gagaccaatctttctttggtaaccgagatggagactgaaaatatggatgaagtggaagca
gaatcgacatccatagtcaagtcaaaggactgtaaaaaggggccatgcactggtttttgg
aaagcggttttgcatgggcctcctcaaccaccactgtgtaaatcacacaatgagccctgt
gtcttacggactgtgaaaaaagcaggacctaatttaggccggcagttttttgtatgcgct
cgtcctcaaggccatgcctccaatcctcaggccaggtgtaatttttttgcctgggtagat
aaagggaagtaa
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