Carassius gibelio (silver crucian carp): 127963718
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Entry
127963718 CDS
T08819
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127963718
04020 Calcium signaling pathway
127963718
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
127963718
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127963718
Protein kinases [BR:
cgib01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
127963718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRR_8
Ig_2
C2-set_2
LRR_5
ig
LRR_4
Haspin_kinase
LRRCT_2
BiPBP_C
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
127963718
NCBI-ProteinID:
XP_052419728
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All DBs
Position
B8:25726697..25777479
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AA seq
796 aa
AA seq
DB search
MSLLSGGFGMSGWGFGWALLLLLALWRPGAACPELCTCTGARISCVDAERSIMTFPMLQS
EAEMENITDIYIANQSSFKSINERDLDAYRNLRNLTVTNTRLEYISRQAFQSNPKLQYLN
LKENNLSNLSWRTFRHLNISYLLLAGNPLQCICENVWLKQWRGEEAEDLLCVDEGGKKTA
LSTVTLPNCVLPAVTLKPTKVTVQKGLNVTLVCNTSGTPTPTLNWTTCKLNSTYEHEDSG
QRSELRLVNVSSLDNGCRITCGSENMVGEAEASVDLDILFRPVISKLMDAISDHHWCIPF
SVSGNPEPKLSWLLNDKPIEEGPFIRTMIHDYSEGEYHGCLHLDSPTHINNGKYTLLASN
KFGKDSMAVFAHFMHEPWNESVTDPLYYDPTTDDTPIGPPEDKVAVYVVVGIAAVTFTGF
ILMLVILKFGRNSKFGIKGPSSVISNDDDSASPLHHVSNGSNTPSSSDMNSDAVIIGMTK
IPVIENPQYFRCTSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLSTEQEKIL
VAVKTLKEASENARKDFHREAELLTNLQHEHIVTFYGMCVESDPLIMVFEYMKHGDLNKF
LRAHGPDAVLMAEGQMQQQAELTQSQMLYIAQQIAAGMVYLASQHFVHRDLATRNCLVGE
NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI
FTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHTRLNIKEIHNL
LLNLAKASPVYLDILG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtcggggggcttcggcatgtcgggctggggcttcggttgggctctgctg
ctgctgctcgcgctctggaggcccggtgccgcttgtccggagctctgcacgtgcaccggc
gcgcggatctcgtgcgtggatgcggagcgcagcattatgactttccccatgctccagtcc
gaggcagagatggagaacatcacagacatatacattgcaaatcaaagcagcttcaaatcc
attaatgaaagagatctcgacgcgtatcgcaacctcagaaacctaactgtaacaaacacc
aggctggaatatatttccaggcaggcttttcagagcaacccgaaactacaatatctgaat
ctcaaggagaataatctgtccaatctgtcctggaggacgtttcgccatttaaacatctca
tacctgttgctggcgggcaatcctttgcagtgcatctgtgaaaacgtgtggctgaagcag
tggagaggagaggaggccgaggacctgctgtgtgtggacgagggaggaaagaagaccgcg
ctgtctacagtcacactgcccaactgtgttctccctgctgtgactctgaaacccactaaa
gtgaccgtgcagaaagggttgaatgtgacgctggtgtgcaacacttcaggaacgcccaca
ccgactctgaactggaccacctgcaaattaaattcaacatacgagcacgaggactcaggt
cagaggtcagagctcagactggtgaatgtctcttctctggacaacggatgcagaatcact
tgcgggtctgaaaacatggtgggagaggctgaggcctctgtggatctggacatactgttt
cgacctgtaatcagcaagctgatggatgcgatctcagaccaccactggtgcattcccttc
agcgtgtcgggcaacccagagccgaaactgagctggttattaaacgacaaacccattgag
gagggcccctttatccgcaccatgatccacgattactccgagggcgagtaccacgggtgc
ttacacctggacagtcccacacacatcaacaatggaaaatacacactgctggccagtaat
aaattcggaaaggacagcatggcggtatttgcgcatttcatgcacgagccttggaacgaa
tcagttactgatccgctgtattatgatcccactacagatgacactcctattggaccgcct
gaggacaaggtcgctgtgtacgtggtcgtgggaattgcggcggtcacattcacaggcttc
atcttgatgctcgtcattctgaagtttggacgcaactcaaagtttggaatcaaaggtcct
tcctcagtcatcagtaatgacgatgactctgccagtcctcttcatcatgtgtccaacggc
tctaacacaccctcgtcctctgacatgaactcggatgccgtcatcattggcatgaccaag
attcccgtcatagagaacccgcagtacttccgctgcaccagtatgctcaaatctgataca
tttgttcagcacattaagaggcacaacattgtactgaagagggaacttggagaaggagcg
tttgggaaagtgtttctggccgaatgctacaacctgtccacagagcaggagaagatctta
gtggctgtcaagactttgaaagaggccagtgagaatgccaggaaggacttccatcgtgag
gccgagctgttgaccaatctgcaacatgaacacatcgtcacattctatggcatgtgtgtt
gagagcgatccccttatcatggtgtttgagtacatgaaacacggcgacctcaacaagttc
ctaagggctcatggtcctgatgcagtcctgatggctgaaggacagatgcagcaacaggca
gagctcactcagtctcagatgctgtatattgcgcagcagatcgccgcaggcatggtgtat
ctggcttctcagcactttgttcacagagacctggccacacgaaactgcctagttggggaa
aatctcctggtgaagatcggagactttgggatgtcccgagacgtctacagtacagattac
tatcgagttggaggtcataccatgctgccaatccgctggatgccaccagaaagtatcatg
tacaggaagttcaccacagagagtgatgtctggagcttgggagtggtgctgtgggagatc
tttacctatgggaaacagccctggtatcagctgtcaaataatgaggtgattgagtgcatc
acccaaggtcgtgtcctgcagcgaccccggacctgtccaaaggaggtgtatgacttgatg
ctgggatgctggcagagagaaccacacacccgactcaacattaaagagatccataacctg
ctcctcaacctggccaaggcatccccagtgtatctggacatcctgggataa
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