Carassius gibelio (silver crucian carp): 127963736
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Entry
127963736 CDS
T08819
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127963736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127963736
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127963736
mRNA degradation factors
5'-3' decay
Lsm complex
127963736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
127963736
NCBI-ProteinID:
XP_052419758
LinkDB
All DBs
Position
B8:complement(22617062..22619205)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADMLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagcctcatcgaggacattgataagaaacaccttgtt
ctgcttcgcgatggaagaacattgattgggatcctcagaagcatagatcagtttgctaat
ttagttttgcatcaaactgttgaacgtattcacgttggtaagaaatttggtgacatacct
cgtgggatatttgtcgtcagaggagaaaatgtggtcttgcttggagaagtagatctggat
aaagagtgtgatcagatcctccagcgagtttccattgaggagatcctggaggaacagcgg
acagaacagcaagccaagcaagagtcagagagactgaagctacaggcggtcaaagagcga
ggcttatccatccctaaagctgacatgctagatgatttctga
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