KEGG   Carassius gibelio (silver crucian carp): 127964095
Entry
127964095         CDS       T08819                                 
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    127964095
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127964095
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     127964095
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127964095
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127964095
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHDvar_NSD Dsh_C PHD_5
Other DBs
NCBI-GeneID: 127964095
NCBI-ProteinID: XP_052420221
LinkDB
Position
B8:complement(15345378..15365402)
AA seq 1523 aa
MTQRGPAEFTPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
AEEGGFDLVCSERRWTKIAMTLGFAPGKAVGSHLRAHYERILYPYNLFHSGTNLLALDLG
AKLTSFVAPPGLEECLQKASVNDVNKDKEYKPHELLQRQNIHIQPSDTSAPARRAKRIKT
ESGCVKSEGGEGCENRPNLRRRMGSFVAKPEPEREVPIQVKQEPVEIKEINPEPEKSKSR
YKKNIPPPPVSTVDMYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLSDVPRGDWRCP
KCLAQECSKPQEAFGFEQACRDYSLKSFGDMADSFKSDYFNMPVHMVPTELVEKEFWRLV
GTIGEDVTVEYGADIASKEFGSGFPIKGGKFKVAPHDEKYLRCGWNLNNMAMMTPSVLTH
VTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVM
KKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGF
NFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKADSLDVVLASAVQKD
MQVMIKEERELRDKVRKMGVVQCELFEYNLLADDERQCIKCRTTCYLSALTCPCRPGVQV
CLHHAHDLCSCPVSNYTLNYRFTLDDLYPMMNAVRQRAESYDEWASRVTEGMEAKLDKKR
NVTVFRALLEESGEKSFPENDLLRQLRLVTQDAEKCSSVAQQLLNGKRQTRYRTGGGNSI
NQLTVEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSDEVSADSVSEIES
LLEEGSQFDVCLPELPLLRERLEQARWLAGVRQAEDPVSNPCGLSLDSMRRLIDRGVGLT
PHPSTERTMARLQELLTVSEELEENAQALLKARPPESLETLSSMLTRVDGVPSYLPNCQL
LQDTVNRAKEWLQEAEDLQVGGQTLVLSSLSDMVLRAHAIPVRLEPLDQLEVLVSEVQAW
KESAAKTFLIKNSPFTLLEVLCPRWEVGSSLKKKMRKMKGECVSSGKKKLVKLDSMSDVE
RALSHSKDSASAMFTLAEVRLKELESLCALRAANESKLLPTADCASLKVCVCQKQPMGAM
LQCELCRDAFHSVCVRGPFDPLDPEAWLCPLCLRSTKPPLARIQTLLSSLQRIRVRLPEG
DALRYMIERTVSWQRRAQEVIDSYNHSLTSQDCRGASPTQSHRTTEHKRKLLWGSPSQCQ
DWGVSGHEQSVFYTEQCCIPLQGLSSEVEELMVEGLLLQVSVPETQQLYRLLLSGPPTTN
MSHTEHPPYLTPKHSSPQREVDAITSAEKKAKRRMNRDEAEIRDRGMKPKSKKQRMGTEK
RRERKAASVSASDVSQSEDSEEDMTQCPAENCLQPEGEEVYWVQCDCCNRWFHMICVGVS
AELAAQEDYMCVTCSTTNTVRRK
NT seq 4572 nt   +upstreamnt  +downstreamnt
atgacccagcggggcccggccgagtttaccccaccgcccgagtgtccggtgttcgagccc
agttgggaggaatttgcagacccgtttgcgtttatcaataaaatccgacccattgccgag
aaaaccggtatctgcaaggttcgaccgccgccggattggcagcctccatttgcatgtgac
gttgacagacttcattttactccacgaatccagaggctcaacgagcttgaggctcaaaca
agagttaaactcaacttcttggaccaaattgccaagttttgggaactacaaggatgcaca
cttaaaattccacatgtggagcggaagatcctcgatctgtaccagctcaacaaattggtt
gcagaggagggtggattcgatttagtttgtagtgagaggagatggacgaagattgccatg
acattggggtttgccccaggaaaagctgtggggtcccacctgagagcccattacgagagg
atcctgtatccgtacaacctcttccattctgggacaaacttgctggctcttgaccttgga
gccaaactgacaagttttgtggcacctcctgggctggaggagtgtctgcagaaggcatca
gtgaatgatgtaaataaagataaagagtataaaccccacgagctgctgcagagacaaaac
attcacattcagcccagcgacacgagtgcacctgctagacgagccaagaggatcaaaaca
gagtctggctgtgtcaagtcagagggaggtgagggatgtgagaacaggcccaatctcagg
aggagaatgggttcctttgttgccaagcctgaaccagagcgagaggtccccatacaggta
aagcaggaacccgtggagataaaagaaataaatcctgaacccgagaaaagcaaatcacgt
tacaagaaaaacatcccccctcctccagtcagcacggtggacatgtatgtgtgtttagtg
tgtggaaaggggaacgatgaggaccgattgttgttatgcgatggttgtgatgacagctac
cacaccttctgcttgatcccgcctctcagtgatgttcctagaggggattggaggtgccct
aagtgtctggctcaggagtgcagtaaacctcaggaggcgtttggcttcgagcaagcttgc
agggactattctctgaaatcctttggggatatggcagactccttcaagtcagactatttt
aacatgcctgttcatatggttcccaccgaattggtagaaaaagagttttggaggttggtc
ggtaccattggggaggatgtgacagtggaatatggcgctgacatcgcctcgaaagagttt
ggaagcggttttccaatcaagggtggaaagtttaaggttgcgccgcacgatgagaaatat
cttcgctgtggttggaacctgaataacatggccatgatgacaccatcagtgctgactcac
gtcactgctgatatatgtggcatgactttgccatggctgtacgtgggcatgtgcttctcc
tctttctgctggcacattgaggaccactggagctattccatcaactacctgcactgggga
gagcctaaaacgtggtacggtgctcctggttttgccgctgagcagttggaagcagtcatg
aagaaactggccccagaactgtttgagtctcagccagaccttctacaccagcttgtcaca
atcatgaaccccaatacactcatggcccacggagtaccaatttacagaaccaatcagtgc
gcaggagagttcgtcatcactttcccacggtcctatcacagcggcttcaaccagggcttc
aactttgcagaggctgtgaacttttgcacagtggactggatgcccctagggcgtcagtgt
gtggatcactaccgccagctgcaccgttactgcgtgttctctcatgatgagatggtgtgt
aacatggccatgaaagccgacagcctggacgtggttctggcgtcagccgtacagaaagac
atgcaagtcatgatcaaagaggagagagaactgcgggacaaagtccgtaagatgggggtg
gttcagtgtgaattgtttgaatacaacctgctggcagatgatgagagacagtgcataaag
tgtcgcaccacctgttacctgtctgctctcacctgtccctgcagaccaggagtccaggtg
tgtctacaccatgcccacgacctctgctcctgccccgtttccaattacacactcaattac
cgtttcacactggatgacctttaccccatgatgaatgctgtgcggcagagggcggagtcc
tatgatgagtgggcgtcacgagtaacagagggcatggaagcaaagcttgacaagaaacgc
aatgtcactgtgtttcgcgcccttctggaggagtcgggcgagaagtcgttcccagagaac
gatctcttgcgtcaactgaggctggttactcaagatgctgagaaatgctcgtctgttgct
cagcaactgctaaatggcaagaggcagaccaggtaccgcacaggcgggggtaattctatt
aatcagctcacagtggaggaaatgagatcatttgtccgccagctttataacctgccctgc
agcctaacacaagcaccgcttctgaaggagctgctgaacagcattgaggatttccagcag
catagtgagaagcttctttctgatgaagtgagcgcagattctgttagtgagattgagtcg
ttgctggaggagggctctcagtttgacgtgtgtcttccggagttgccgctgctgcgggag
cgtttggagcaggcccggtggctggctggagttcggcaggcagaggatcccgtatcaaac
ccctgcggtctctctctggacagcatgcgccggctgatcgatcgaggggtcggactgaca
ccgcatccctccaccgaacgcacgatggctcgactgcaggaactgctcacagtgtccgag
gagttggaagagaacgcacaggcgctgctgaaggccaggcctccagagagtttagagacg
ctcagttctatgctgactcgggttgacggggtaccatcatacctgccaaactgccagctg
ctgcaagacaccgtgaacagggctaaagaatggctccaggaagctgaagatttacaggtt
ggaggtcagactctggttctcagctcgctctctgatatggttctgagagctcatgctatt
cctgtgcgtctggagcctctggaccagctggaggttctggtgtcagaggtgcaggcctgg
aaagagtcggctgctaaaaccttcctcatcaaaaactctcctttcacgctgttggaggtc
ttgtgtcctcgatgggaagtgggcagctctttgaagaagaagatgaggaagatgaaggga
gaatgcgtgtcatcagggaagaagaagcttgtgaagttggacagtatgagtgatgttgaa
agagcactttcacacagcaaagactctgcgtctgctatgtttactctggctgaggttcgt
ttaaaagagctggagtccctatgcgctcttcgtgcagctaatgaatcgaagctcctgcct
acagcagactgtgcttctctcaaagtgtgtgtgtgtcagaaacaacccatgggtgccatg
ctgcagtgtgagctgtgtcgagatgctttccacagcgtgtgcgtacgtggacccttcgat
cccctcgacccagaagcctggctgtgtccgttatgtctacggtcgacaaagcccccactg
gccaggatccagaccctgttgtcatcactgcagcggatccgtgtgcgtctcccagaaggt
gatgctctgcgttatatgattgaacgcactgtcagctggcagcgacgagcacaagaggtc
atagactcgtacaatcactcgctgacctctcaggactgcagaggagcttcacctacacag
agccacaggacaacggagcacaaaaggaagctactgtggggatctccatctcagtgtcag
gactggggtgtttccgggcacgaacagtcggtgttttacacagagcagtgttgtatccct
ctccagggtctcagttcggaggtggaggaactgatggtggagggtttgctcctgcaggtg
tctgtcccagagacccagcagctctacagacttctgctgtccggccccccgaccacaaac
atgtcccacacagaacacccaccctacctcacaccaaaacactcctcaccgcagagagag
gtagatgcaatcacttcagcagaaaagaaagccaagcggcgaatgaacagagatgaggct
gagatcagggatagagggatgaagccgaaaagcaagaagcagcgaatgggtacagagaag
cggcgagagaggaaagcggcttcggtctctgcatcagatgtgtctcagtcagaagactct
gaagaggatatgacccagtgtccagcagagaactgtctccagccggagggggaagaggtg
tactgggttcagtgtgactgctgtaaccgctggttccatatgatttgtgtgggagtatca
gcagaactcgcagcccaggaggattacatgtgtgtgacctgcagcacaaccaacacagtc
cgacggaagtga

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