Carassius gibelio (silver crucian carp): 127964169
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Entry
127964169 CDS
T08819
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127964169
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127964169
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
127964169
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
AAA
Motif
Other DBs
NCBI-GeneID:
127964169
NCBI-ProteinID:
XP_052420281
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All DBs
Position
B8:complement(15300079..15309747)
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AA seq
766 aa
AA seq
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MAASTKGAHELQSRTRTEDVLNNGGVDFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLG
RCGLDLIVQAKSGTGKTCVFTTIALDSLILENTTTQVLVLAPTREIAVQIHAVVMAIGSA
MEGLECHVFIGGTPVSQDKLHLKKCHIAIGSPGRIKQLIEMGVLTTSSVRLFVLDEADKL
LEDDSSSSFQEQINWIFSSLPANKQMLALSATYPESLAQYLSRYMREPTFVRLNPTDPGL
LGLKQYYKIVPSHSLPHKVFEEKVQSLFELFSKIPFNQALVFSNLHTRAQHLADILSSTG
LPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPKDWETY
MHRIGRAGRFGTLGVAVTYCCHGEEENKMMAIAQKCSLNLIHLPDPIPPGIMEEACDWDV
IIEPPSKPTQKIPDIPKPEKKKQAKSEKPTLKPSREPHISTVIPERTTGDESYSFETKVK
KHSTKPARQKPIQSTTNLQHDSTLTPNEQNDTLPRIPPLSSFKLHARKAMTFNEAVADYE
NFITEGPGRSVEIIRQYEGFNRSRDAVNGLHSVHDDGEDNVKAYKSYAREESHSHQDLPP
PQEVSELSSEQKTRSVLSDEDSSECEMEEESQSSSSVPAQSSHHTLAPPDRRVSELKESS
LSLGRVSQQISRNKQRPSKPQCQNPANHHSHSQKHRPASSRKAASAGQNRRKRETDELEE
EVAGQDYWSSYRAWVEYYNSYYHHSPYNWMTAFYMNSVYIKEMMKH
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccacgaaaggggcgcatgagctgcaatccagaacccggacagaagatgtt
ctaaataacggtggtgtcgacttcagctcgttactcctgtcaaaacctgtgcttgagggg
ttatctgcctctggatttcagagaccgtcccccatccagctgaaggcaatcccgctgggt
agatgtggactcgatcttattgttcaagccaagtctggcacaggaaaaacctgcgtgttc
accaccatcgctttggactctcttatattggaaaacacaaccacacaggtgctggttctg
gccccaactcgggagattgcggtgcagattcatgctgttgtcatggcaataggcagcgct
atggagggcttggagtgtcacgtgttcatcggtggcacacctgtcagtcaagacaaactg
cacctgaagaaatgccacattgccattggttcaccaggtcgtattaagcagctaattgag
atgggagtcttgactacatcctccgttcgcttgtttgtcttggatgaggccgataagctg
ctggaggatgatagcagcagcagctttcaggagcagatcaactggatcttctcctctcta
ccagcaaacaaacaaatgttggccctctctgccacctacccagaatctttagcacaatat
ctgtcgagatacatgagagagccgacgtttgtgcgactgaacccgacagaccctggactc
ctcgggctaaagcaatactataaaattgtgccgtctcattcattacctcataaagtcttt
gaggagaaggttcagagtctctttgaactcttcagcaaaatcccatttaaccaagcgctg
gtattctcaaacctccatacaagagctcagcacctggctgatatcctctcctctacaggt
ttacctgctgtctgcatctcaggtggtttaagtcaggatcagaggttagaggcgatgtgg
aagctgaaacagtatcagtgtcgagttttaatatccactgatctgacctcacgtggtatt
gatgctgagaaggtgaacttggtgattaatctggatgttcctaaggactgggagacctac
atgcaccgtattggtcgtgctggacgatttggcactctgggggttgctgtgacctactgt
tgccatggagaagaggagaacaaaatgatggccatcgctcagaaatgttctctcaatctc
attcatttaccagatccaatccctccagggatcatggaagaggcttgtgactgggatgtg
ataattgaaccaccttcaaaacccactcagaaaattcctgacattcccaaaccagagaag
aagaaacaagctaaatctgaaaagccgacattgaaaccctccagggagcctcacatctcg
acagtcatcccagaaaggacaacaggtgatgaatcctacagttttgaaaccaaagttaaa
aagcactcaactaaacctgcaaggcaaaaaccaatacagtcaactacaaacctccagcat
gactcaactcttactccaaatgaacagaatgacactcttcccagaattcctccactatcg
tcttttaagttgcatgcgcggaaagctatgactttcaatgaggctgtggcagattatgag
aatttcataacagaaggtccgggaagatctgtcgaaatcattcgccaatatgaaggattc
aacaggagtcgagatgcagttaatggattgcatagtgttcatgatgatggggaagataat
gttaaggcttataaatcatatgcgcgtgaagaatcgcactcccatcaagatcttcctcca
ccacaggaggtttcagagttgtcctctgagcagaagactcgttctgtcttatctgatgaa
gattcttcagagtgtgagatggaggaggagagtcaatcaagctcttctgtccccgctcag
tcttcacatcacacactggctcctccagacagaagagtctcagaattgaaagaatcctct
ttatctttaggcagagtatcacaacagattagcagaaacaagcaaaggcctagtaaacct
caatgccagaatcctgctaaccaccacagccattcccagaaacaccggccggcttccagc
aggaaggctgcctcggcaggacagaataggagaaaaagagagactgatgaactggaagag
gaagtggctgggcaggattattggagttcatacagagcctgggttgaatattacaattca
tattatcatcactcaccctataactggatgactgcgttttatatgaattctgtctacata
aaagaaatgatgaagcactaa
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