Carassius gibelio (silver crucian carp): 127964224
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Entry
127964224 CDS
T08819
Name
(RefSeq) tissue-type plasminogen activator-like
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
127964224
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127964224
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
127964224
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
127964224
Peptidases and inhibitors [BR:
cgib01002
]
Serine peptidases
Family S1: chymotrypsin family
127964224
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
127964224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
EGF
hEGF
Trypsin_2
DUF1986
DUF316
EGF_C8A_B_C6
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
127964224
NCBI-ProteinID:
XP_052420327
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All DBs
Position
B8:complement(3002460..3016049)
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AA seq
579 aa
AA seq
DB search
MNLLLNLLLLLFTLCCAADPKVFNIRQKRGMLTNRDACVDSYSAAVRDIGATWLRWKGQR
VEFCRCNFQARAQCHEIPTTTCFVSQCYNGGRCKEALYSSDFICQCPPGFTGTQCEINTT
ERCSRGQGSGYRGTWSTSVSGLECMNWNSSSLRGKKFTARRPEANTLGLGNHNYCRNPDG
DAKPWCYVYKKAQITWEFCSLPTCLIDPYLECSQRSGQTYRGTKAVSRSGLKCLSWDSPA
VSRKIYNAWRSDARDIGIGSHNFCRNPNGDLGPWCHVYKGSQLVRELCDVPKCPRKTPSF
TTLGQRAPNTINTQGSCGQRVEAPSNSLPMYRIRGGQVSDIREQPWQAAMTVYLPRKRSY
SFLCGAVLIDSCWILTAAHCFQERFDANRLQIVLGRTFRLQNSSSEQILDVEKYWIHEQY
NDDTFDNDIALLKLKSESGICAVNSPEVLPVCLPEPNLVLPDLTECEISGYGKETEFSAF
NSDRIKRGRVRLWPQEQCVPEKLADRVVTPNMLCAGDTRNLDDACKGDSGGPLVCPKNGR
MTLMGLISWGDGCGKKDTPGVYTRVTNYINWISSKMRAN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattactaaacctgctgttgctgctttttactttgtgctgcgctgcagatccc
aaagtgttcaatatcagacagaagagaggcatgctcacaaatagagacgcttgtgtggac
tcttattcggccgcggtcagagatattggggcgacgtggctgcgatggaagggtcagaga
gttgaattctgccgctgcaactttcaagcaagagctcagtgtcatgagataccgacgacc
acatgtttcgtgtctcagtgttataatggagggaggtgtaaagaagctctttactccagt
gacttcatctgtcagtgtcctcctggctttacaggaacacagtgtgaaatcaacacaact
gagcggtgttccaggggtcaggggtcgggttaccgtggcacctggagcacgagtgtgtca
ggactggagtgtatgaactggaattccagctcactccgagggaagaagttcacggccagg
agaccagaggcaaacacactgggactgggaaaccacaactactgcaggaatccagatgga
gacgctaaaccctggtgttacgtttataaaaaggctcagatcacatgggagttctgctct
ttacccacctgcttaatcgacccctatctagagtgctcacagagatccggtcagacctac
agagggacgaaagctgtctcacgcagcggtttgaagtgtctgtcgtgggattcacctgca
gtctctcgaaagatctacaacgcttggagatctgacgccagagacatcggcatcggcagc
cacaacttctgcaggaacccgaatggtgacctgggcccctggtgtcacgtctataaaggg
tctcagctggtgcgggagctctgtgacgtccctaaatgcccgaggaaaactccatccttc
accacacttggccaacgagccccgaacaccatcaacactcaaggttcctgcggtcagcgg
gtggaagctccttcaaactctctgcccatgtataggatccgtggaggtcaggtcagtgac
atcagagagcagccgtggcaggccgccatgaccgtctatctgccacgcaaaagatcttac
agcttcctctgcggcgccgtcctgatcgactcctgctggatcctcacggctgctcactgc
ttccaggagagatttgatgcgaatcgtcttcagattgttctgggtcgaaccttcaggctt
cagaactccagcagcgagcagatcttggacgtggagaaatactggatccatgagcagtac
aacgacgacacgtttgacaatgacatcgctcttctcaagttaaagagtgagtctggtatc
tgtgccgtaaactctccagaagttctgcctgtatgtttaccagaacctaacctggtttta
ccggatctgacggagtgcgagatctctggttacgggaaagagacagagttttctgcgttt
aactcggatcgaattaagcgtggtcgtgtgcgcttgtggccgcaggaacagtgtgtcccg
gagaagctggccgaccgtgtggtgaccccaaacatgctgtgcgccggagacacacgcaac
ctggacgacgcctgcaagggggattccggcggtcctctggtgtgtcccaaaaacggcagg
atgactctgatgggtttaatcagctggggcgacggctgtgggaagaaagacacgcctggc
gtttacacacgtgtcacaaactacataaactggatctccagcaagatgagggcaaactga
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