Carassius gibelio (silver crucian carp): 127964229
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Entry
127964229 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127964229
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127964229
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127964229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127964229
NCBI-ProteinID:
XP_052420333
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Position
B8:complement(17105127..17111541)
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AA seq
396 aa
AA seq
DB search
MDSHGEEDLGRTAEALCLEVRPLQRDRLGTRLAHRKTFSLDYTNAHQVVHYRGQNSPRGY
SDLHFPDCDLQAGHMLRSTASQQASTSPCHRTSPPPYGRTVMLSRRSDLDPVMSDIIRGS
RISREDQEAGSSFNRRAPLMSLSSSEEEQEAGEQAGRAPAGLSMTSSLLTPTPTGERRLG
KRERKQLKSLRRRQRRRELCKQSQQQENVQSSTGNPSSSSEDEELPGRDREGYICAVCLD
VYFSPYMCHPCSHVFCEPCLRTLAKNCPTNTPCPLCRTTITHVFFQKELNQTARTFFPKE
YLSRKQNFQKAGCAKWPLPSCRKLFRIFGGFRRQANPIGRRQFPHGGYRLDAFNFEDDSH
GWRFDMDMVIIYIYSVNWVIGFIIFCFFCYFFFLSF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggactcacatggagaagaggaccttgggcgcacggcggaggccttgtgtttggaggtc
aggcctctgcagagggacagacttggaaccagactagcccacaggaagactttcagtctg
gactacacaaatgcccaccaggtagttcattacagggggcaaaactccccacgaggatac
tctgatctgcactttccagactgtgatctccaggcagggcatatgctgaggtccacagcc
agccaacaggcctccacatccccatgccataggacaagccctcctccctatggcaggact
gtgatgctttcgaggaggtctgatctagatcctgttatgtcggatattattagaggctca
cgcatctctcgtgaggatcaggaagcaggcagctccttcaaccgcagagctcctctgatg
tctctcagcagctctgaggaggaacaggaggctggagaacaggctggcagagctccagca
gggctcagcatgacttcatccctgctaacacccactcccactggggaacgcaggctgggt
aagagagagaggaagcaactgaagagcctgaggaggagacagaggaggagagagctctgc
aaacagagccagcagcaggagaacgtgcagagctctacagggaacccatctagcagtagt
gaggacgaggagctgcccggccgggatcgtgaaggctatatctgtgctgtgtgtctggat
gtctacttcagtccctacatgtgccatccctgcagccacgtcttctgtgagccttgtctg
cggacactggccaagaactgccccaccaacacaccctgtccattgtgcagaaccaccata
acacacgtcttcttccagaaagaactgaaccaaacagcccgtacattcttcccaaaggaa
tacctgtctcggaagcagaatttccagaaagcgggctgtgcaaaatggcctcttccaagc
tgccgtaaactatttcgaatttttggaggctttcgaaggcaggcaaatccaatcggcaga
cggcagttccctcacgggggctaccggcttgatgccttcaactttgaggatgattcgcat
ggctggcgatttgacatggacatggtgatcatctatatatactccgtcaactgggtcatt
ggcttcattatcttctgcttcttctgctatttcttcttcctctctttttaa
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