Carassius gibelio (silver crucian carp): 127964295
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Entry
127964295 CDS
T08819
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127964295
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127964295
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
127964295
NCBI-ProteinID:
XP_052420377
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Position
B9:complement(28923899..28936784)
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AA seq
960 aa
AA seq
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MLLSQDMKLYCSYFVLLCMICKVSCTTTKYFTFEEDSPGTEIGNLSQDLKIDPAEDPETS
FKFIQKTNSVIHMRQIDGLLTVGEVIDREQLCHRSPRCLITFDVVAFSKEKFQLIHVEIE
VKDINDHSPQFTRNETHLDVSENSPLNSRFPLDVAVDRDVGDNYVQSYQISHTSHFAVEV
STREDGEKSAELVLIKTLDRETEEFYTIEVTATDGGTPAKSGSMTVYIRVLDFNDNSPTF
EHNSLKVQLSEDSPIGSRVLKVHAFDPDAGINGEVVYGFIEGSPSEVTRVFQIDLITGEV
TLKDSVDYETKKSYELHIQASDLGANSISSTCRAIVEIVDVNDNAPEINIKPMTSTSDRV
AFITESAAEESFVALISTSDADSGPNGYVQTSLEGHEHFKLQQAYSDTFMIVTTTTLDRE
AIPEYNLTVISEDLGTPPFKTVKHYTIRITDENDNAPMFSKAVYDVSVIENNIPGSYLTT
LVARDLDVGKNGKVSYSLIDSKTPDGSLISTFVSIDPHSGSLYTLRSFNFETLKEVEFAV
KASDKGFPPLSSTTLIHIRVVDENDNFPYFTYPVLRNNSADVPIPFNARSGYLALKLTAQ
DEDSGVNGEISFHILEDDAKLFSVDKNSGEIVLTRKLTAQCGDVLQIKVSVADNGRESLS
STASVRFVVTDTGAQEDQVVVLLRSKDEETLEFDVWTAVIIGFAGCCALLLTAIVILTVT
CSIKRRRRNFGRDGLYGSTPLSKNNSGGSDIYGGPNAFLRSEGDSMQPLYEDKSMDFEEK
LFLPCKPFEQTFLWQDERYCLQRSGTSNTDQLSVKDSGKGDSDFNDSDSDISGAAQKRGL
TTFQPLARGAFNSAGDWKSTAQVIQTRNMHIPPGSAYTIGFAPAPLYNTSHVSPHSWRES
HSNTNMMNTQRPAQSFSRTGTLPSYSAHQTRRATTGVQEQTETGKDVFLGSESSEVATTF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgagtcaagatatgaagctctactgcagttacttcgtgcttctgtgcatgatc
tgcaaagtcagctgcacaacaacgaagtacttcacgtttgaggaagactcacctggaaca
gagattggaaacctttctcaagacctgaaaatagacccagcggaggatcctgagacttca
ttcaagtttatacagaagacaaactccgtcattcacatgagacaaatcgacgggctttta
acagtgggagaagtcatcgaccgagagcagctttgtcaccgatctccacggtgtcttata
acttttgacgttgtcgctttttcaaaggagaagttccagctcattcatgtcgagatcgag
gtaaaagacattaacgatcattcacctcagttcacacgcaacgaaacgcatttggatgta
tcagaaaactcacctttgaactcacgatttccgctggacgtcgctgtggatcgcgacgtc
ggagacaactatgtgcaaagctaccaaatctcacacacaagccatttcgctgttgaagtc
agcactcgtgaggatggagaaaagtcagctgaacttgttttgatcaagacgcttgacaga
gaaaccgaagagttttataccatcgaggtgacggcgactgacggcgggacgccagcgaaa
tcaggctcgatgacggtttacatccgagtgctggactttaacgacaacagcccgacgttc
gaacacaactcactcaaagtccagctcagcgaagattcacccatcggctcacgtgtgtta
aaagtacacgcttttgatcccgacgccgggatcaacggagaagtcgtgtacggcttcatc
gaaggctccccgagcgaagtcacacgtgttttccagatcgatctcatcaccggagaagtg
accctcaaagactccgtcgattatgagaccaaaaagtcgtacgagttgcacatccaagcc
tccgatttgggcgccaattcaatatcatccacctgtcgtgctattgtcgaaattgttgat
gtgaacgataatgcgccggagattaacatcaaaccaatgacttccaccagcgacagagtt
gcgttcatcaccgaatccgcagccgaagaaagtttcgtagctcttattagcacctcagac
gcagattcgggtcccaacggctatgtccagaccagtttagaaggacacgagcattttaag
ctgcaacaagcctacagcgacacttttatgatcgtaacaaccacgactttggacagagaa
gccattccagaatacaacctaactgtgatttccgaggatttaggaactcctccgtttaaa
accgttaaacattataccattcgcatcacagatgagaacgacaacgcaccgatgttcagc
aaagccgtctatgacgtctcagtaatagaaaacaacattcccgggtcgtacctgaccacg
ctcgtcgcacgcgatctcgacgttgggaaaaacggaaaagtctcctacagcctaatcgac
agcaaaacgccagacggttcgctgatttctacgttcgtttccatcgatcctcattctggc
tcgctgtacacgttgagatcgtttaattttgagacgctgaaagaagtcgagttcgcggtc
aaagccagcgataaaggtttcccgccgttatcgagcacgacgttaattcatatccgcgtg
gtggacgagaacgacaacttcccgtatttcacatatccggtgttacgaaacaattccgcc
gacgtcccgattccctttaacgctcggagcggctatttagcgttaaaattgacggctcaa
gatgaagacagcggtgtgaacggcgagatcagtttccatatcctagaagacgatgctaaa
cttttctcagttgataaaaacagcggcgaaatcgtcttgacacgaaaactcactgcgcaa
tgtggagacgtcctacagattaaagtttcggtcgctgataatggaagagagtcgctttct
agcacagcaagcgtccggttcgtggtgacagacacaggtgctcaagaggaccaggtggtt
gttttactccgatccaaggatgaagagactctagagtttgacgtgtggactgcagtgatt
atcggtttcgctggatgctgtgcgctgttgctgactgcgattgtcatcctcaccgtgact
tgctccatcaaacgaaggcgaagaaactttgggagagatggcctgtacggatcaaccccg
ctttccaagaacaactctggcggttcagacatttatggaggccccaatgccttcctcagg
agcgaaggcgattcaatgcaacctctgtatgaagataaaagcatggattttgaggaaaag
ctgttcctgccatgcaaaccttttgagcaaacatttttatggcaagatgaaagatactgt
ctacaaaggagtggcaccagcaacacagatcagctgagcgtgaaggacagcggtaaagga
gacagtgatttcaatgacagcgactctgacatcagcggagccgctcagaaaagaggcctg
acgaccttccagccgctggccagaggtgcattcaacagcgcaggagactggaagagcaca
gctcaggttatccagacccgaaacatgcacatcccgcctggcagcgcctacaccatcgga
ttcgcaccagcaccgctttacaacaccagccacgtctctcctcattcctggagagagagc
cacagtaacaccaacatgatgaacacacagcgccccgctcagagcttctccaggacagga
acgctgccctcatactcggcccatcagaccagaagagcgacgacgggcgtccaagagcag
actgagaccggcaaagatgtgtttctgggttcagagtcatctgaagtcgctaccactttt
taa
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