Carassius gibelio (silver crucian carp): 127964820
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Entry
127964820 CDS
T08819
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127964820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127964820
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127964820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
127964820
NCBI-ProteinID:
XP_052421147
LinkDB
All DBs
Position
B9:17113026..17155329
Genome browser
AA seq
1842 aa
AA seq
DB search
MEWRPQSSVVYEAAYSEAQRWIEAVTKKKSVSSNFRSSLENGLLLCDLINKIRPGVIKKL
NRLSTPIAGLDNISLFLKACAKLGLKEAQLFHPGDLQDFSTRVTVKHQESSRRLKNVLIT
IYWLGRKTHADPFYNGPYLNLKAFEGLLGKALYKTLEDCTSLQGSVRNSSCRDSWYSEKE
ELFPLRDRHTREDSLDSLDSLGSRTYSTSSDATLKGSSEGCGSDPEADLSFMMSENKEYR
RSLVIAPKATTQYNQFLPTKDKQSGYVPAPLRKKRAERNDDNRRSWASPLYTEDDGTFTS
HERAGSDPSAITAHPSLAYQYESSDSDADRPDPDVVLDDLASRRFHSPSPVAPTNFALPM
SHLEATAVPCTTRSQVAVSNVSRQTLTHLSSKSQPLQRTYRRPASAGVCVYDDSEEEDDE
FGHADPVQDDLYARKVGLTPQPSVTVPFDKFLPKFWTPEEDAHVKKIKLGSQRRPWYRKI
QGFSPKKSGSSSEESDGDVNPWLSVPTFSRTQSEPPPFHSHAPEGLAQSSLTSTLSYQTQ
PLTVAQQTAGLHNLKPPDFWPRPDPASGPRLVKCAKRPLLGREHPNDPYNVSADILPDLE
NDDMFTRRTKTFHSSDDLAKLKYGNFLLPRRRSESDVMVVIQPRHESEPIYPDVEKDDVV
FRRVQQQISHRPLSGAPDNYHPVPIPEAWALPAKLQAKLICDPVEPRQHKPKPEIKHGAE
QHLKADDMLLRKLRALNTQGKVEKEALGVSFSCSEEDLQKWQAIREASRVRYRKRLMVER
LLQKSSGSEGSKSVSDMTDGEMNFSNLPLELRIEEMQKMRARLKENEDKWQDDLTRWKNK
RKSVNSDIVKKKEEREQIEQITSGGIRKSKTFKEMQDERESRQQSNSRDSFNSISDDVFE
EPVPRSRTLPPRSYTIDTPYTPEDKPSVPSIPSLRKREPVAGTLASDQTDFHTRRDRSSP
EIPLKMNDNIEESHTTTQSLLDDPVPALSSSNTSLIKPTSVSKTGSVLSSSELISNTKPV
ENSSGPISSLYKPNSMDTKQSGLDRVSASLPRSYQRSDSARLPSVVTPRPFGTQSNRIAS
LPRAFTVDDSLKRTNGETDRLKKTTVSNRYAQYMKEDDDISKESPVQSSEEEEKTPSPVP
PVYRLSPLPKSPSPLIPSNEVDYSEMRISLNQKPNSSRDFGFQSNWDSTGVRVKSVVPGS
PAELGQVKVGDEILTVNGHMVADMSYTEWKNSLEEALQQGSLFMDIRRHGKNSPSEPYIS
TSLDFTSQQTKDTVVKTGNVSSESGNNNGLNGINGGFHEDSEASNNRESITLKNLKRRSE
FFEQGGSDTAISNLPVPSITTSTTHWSWDPEEERKRQEKWQKEQERLLQEKYKKDQEKLD
EEWRKAQQELEKENFKKHEEEMRRLEEERRKRKEQERLEEEKKKEEEERKRREEEWLRLE
EERRKQEEQERLEEEKRKREEEERKKREQERLRLEEERRKREEQEHLEELRRNREEEERL
LQEKERNRREEERRRLEEQKRKQEQDKVDSFGYTNVYPQLSYSHRSISKSTPELDEVAKP
DIKGVYGRHRGLAGWLLEEELRRKKNTQIQKEQAASELELERRSILNAMKYRDPERASSG
LGEFSRDYKKEPQSQTEVERMQILHEMRKKTSLNTDNSWIRQQSAASVTAKEPIDLPIRR
GESLDILDMPHSSWRSSWSTSDSTSSIPDYSRPHSSLSGSSSYQSGGRPGSATLQSSQSM
SSLRQSWSPTAATPEPEPRAPPRNRSVSGRKICSSCNTPLGKGAAMIIESLGLCYHLTCF
KCFNCRSDLGGSEAGAEVRIRNQQLYCNSCYTRLKTGQPTAM
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggagtggagaccgcagtcttcagtggtttatgaagctgcttactcagaagcacagaga
tggatcgaggcagtcactaagaagaagtctgtgagcagtaatttccggagttctctggag
aatggacttctgttgtgtgatctaataaacaagatcaggcctggcgtcatcaagaagcta
aacaggttatccacacctattgctggcctggacaacatcagcctcttcttaaaagcctgt
gcaaagcttggactaaaagaggcccagcttttccacccaggagaccttcaagacttctct
acacgtgtgactgtcaagcaccaggagagcagcaggaggctcaaaaatgttctgatcacc
atatactggttgggcagaaagacacatgctgatcctttttataatggaccttacctaaat
ctaaaggctttcgagggattacttggcaaagcactatataagacactagaggattgcaca
tcactgcagggcagtgtgcgaaacagctcttgtagagatagctggtactcagagaaagaa
gaactcttcccactccgagacagacacacgagagaagactctctagacagcctcgactca
ctgggctccagaacttacagcacatcctcagacgctacactcaaaggaagcagcgagggt
tgtggaagtgaccctgaagcagatctgagcttcatgatgtcagaaaataaagaataccgc
cgttcactggtcatagcacctaaggccaccactcagtacaatcagttcctgccaacaaag
gacaagcagtcaggctacgttccagcaccattacgcaagaagcgcgcagagcgaaatgat
gacaacagaagaagctgggctagccctttgtacacagaggatgatggcacttttacaagt
catgagagggcaggttcagacccttcagctatcaccgctcacccctctttggcctatcag
tatgagagcagtgattcggatgcagaccgaccggatcccgacgtcgttctagatgacctc
gctagccgtagatttcacagcccctcccctgtcgctccaaccaactttgccttacccatg
agccacctggaggcaactgctgtcccatgtactaccaggtcacaggtggctgtcagtaat
gtgtcccggcagacactgacccatctcagcagtaagtcacagcctcttcagaggacttac
aggagacctgcatcggctggtgtctgcgtttatgatgactctgaggaagaggatgatgag
tttggccatgccgatcctgttcaagatgatctttatgcccgtaaagtaggcctgacgcct
cagccatctgtaacagtgccttttgataaatttctgcccaaattttggacacctgaagag
gatgcacatgtgaagaaaatcaaactgggctcccagcgccggccttggtacaggaagatc
caaggtttcagccccaagaagtcaggttcatcctctgaagaatcagacggtgacgtcaac
ccctggctctctgtacctaccttctctcgcactcagtctgaaccccctccctttcactcc
catgcacctgaaggcctcgctcagtccagcctcacttccacactcagttatcaaacacaa
cctctcacggttgctcagcagactgctggactgcataatttaaaaccccctgatttttgg
cccagaccagatcccgcctctggccccagactcgtaaaatgtgcaaagcgtcccctcctt
gggcgtgaacaccctaatgacccatacaacgtttctgccgacatcctgcctgatttggaa
aatgacgatatgttcacacgtcgtacaaaaaccttccactcaagcgatgacctggccaaa
ttgaagtatggtaacttcctgttgcctcgccgccgatcggagtccgacgtcatggtggta
attcagccccgccacgagagtgaacccatttatcctgacgttgaaaaagacgatgtggtt
tttcgaagggttcaacagcaaatcagtcatcgccccctatctggggcccctgataactac
caccctgttcctattccagaggcatgggctttgccagcaaaactgcaggccaagctgata
tgtgacccagttgaacccagacagcacaaacccaagccagagattaaacatggagcagaa
cagcacctgaaggcagatgatatgctacttaggaaactaagagctttaaatacccaagga
aaggtggaaaaagaagctcttggtgtttctttctcttgcagtgaggaagatctgcagaaa
tggcaagccatcagagaggccagccgcgtgcgataccggaagaggctgatggtggagaga
ctgctccagaaaagctctggtagtgaagggagtaagtcagtgagtgacatgactgatggt
gagatgaacttcagcaacttgccgttggagttgcgaattgaagagatgcaaaagatgcgt
gctcgcttaaaggagaacgaggataagtggcaagatgatcttacaaggtggaagaataag
cgcaagagtgttaattctgatattgtgaagaagaaagaggagagagagcagattgagcag
atcacttcaggtggcatcaggaaatcaaagaccttcaaggaaatgcaggatgagagagag
agccgacagcaaagcaacagcagggacagctttaactccatctctgatgatgtctttgaa
gaacctgtaccccgaagcagaactctgccaccacgtagctacaccatcgacaccccttac
actcccgaggacaaaccttcagtaccctccataccatctctgagaaaaagagaacctgtc
gctggcactctggcatcagatcagacagattttcatacaagacgtgatcgctccagccca
gagatcccactaaaaatgaatgacaacattgaggagagccatacaacgacccaaagcctt
ctggacgatccagttcctgcgttgtccagcagcaacaccagcctgatcaaacccaccagt
gtcagtaaaaccggcagcgttctcagcagctcggagttgattagcaacactaagccagtc
gagaactccagcggccccattagctctttgtataaacctaattcaatggatacaaagcag
tctgggctggatcgagtttctgcctccctccccaggagctaccagagatcagatagcgca
agactaccctctgtcgtcacgccaaggccattcggcacacagtccaaccgaatcgcctcc
cttcccagagcgttcacggtggacgactctcttaagcgcacaaatggagagacagacaga
ctcaagaaaactacagtttccaaccgttatgctcagtatatgaaagaagatgacgatatt
tccaaggaaagtcctgtgcaaagcagtgaggaagaggagaaaaccccatctcctgtccct
ccagtctacagactgtcccccctgcccaaatctccatccccgctcatcccttctaatgag
gtggactacagtgagatgaggatcagcctgaaccagaaacctaacagcagccgggacttt
ggctttcagagcaactgggactccacgggggtccgtgtcaaatctgtagttccaggcagc
ccggcggagctcggtcaagtgaaggttggagatgagatccttacagtgaacggacacatg
gtggcagacatgagctacactgagtggaagaacagtctggaggaggccttgcagcagggg
agtctgtttatggacatccgcagacatggcaagaatagtccctctgagccatacatcagc
accagcctggatttcacatcccaacaaaccaaggatacggtcgtgaaaactgggaatgtc
agctcagagtctggcaataataatggtttgaatgggataaatggtggtttccatgaggat
tcagaggcttcgaataatagagaatccattactttgaaaaacttaaaaaggagatcagag
ttttttgaacaaggtggatcggatacagcaatatcaaatctgcccgttccctccatcact
acatccactacccactggtcctgggaccctgaagaagagcgcaaacgacaggagaaatgg
cagaaagagcaggagcgtttgctgcaggagaagtacaaaaaggaccaagaaaaactcgat
gaggagtggagaaaggcacagcaagagcttgagaaggagaacttcaaaaaacatgaggag
gagatgcggcgtttagaggaagagaggagaaaaagaaaggaacaagagcgccttgaggaa
gagaagaagaaagaagaagaagagaggaaaagaagagaagaggagtggctgcgtttagag
gaagagaggagaaaacaagaagaacaagagcgccttgaggaagagaagaggaagagagaa
gaagaggagcggaaaaaaagagaacaggagaggctgcgtttagaggaagagaggaggaag
agggaggaacaagagcacctcgaggaactgaggaggaatagagaagaggaagagcgcctc
cttcaggaaaaagagaggaatagaagagaggaggagaggaggcgactggaagagcagaag
agaaaacaggagcaagataaggtggactcctttggctataccaatgtttaccctcaatta
tcctactcacacagatctatttccaaatcaactccagaacttgatgaggttgcaaaacca
gatattaaaggtgtgtacggcagacacaggggtttggcaggatggctgctggaagaagaa
ctgaggcgaaagaaaaacactcagatccagaaagagcaggcagcaagtgagctagagctt
gagaggaggagcatcctcaatgccatgaaatacagagatccagagagagcgagcagtggt
ctgggtgagttcagtagagactataagaaagagccccagtctcagactgaggtggagagg
atgcagatccttcatgaaatgagaaagaagacttccttgaacacagacaacagctggatt
cgccagcagagcgctgccagtgttaccgccaaagaaccaattgatctgcccatcaggaga
ggcgagtctcttgacatcctcgatatgcctcattcctcttggagatcatcatggagcaca
tctgacagcacctcgtccataccagactacagccggcctcattcgtctctctctggctcc
tcgtcgtaccaaagtggtggacgtccagggtctgcaactctgcagtcatctcaatccatg
agctccctcaggcagtcctggtccccaactgcagctacaccagagccagagcctcgagct
ccaccacggaataggtcagtgagtggcaggaaaatatgttcgtcctgtaatacaccactg
ggcaaaggagcagccatgatcatcgagtccctggggctctgttatcatttgacttgtttc
aagtgctttaactgcaggtctgatttggggggctcagaagcaggagcagaagtcagaata
cgtaaccaacagctctattgtaactcctgctatactcgactcaaaactgggcagcccaca
gccatgtga
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integrated database retrieval system
