Carassius gibelio (silver crucian carp): 127964840
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Entry
127964840 CDS
T08819
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127964840
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127964840
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127964840
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127964840
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127964840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
127964840
NCBI-ProteinID:
XP_052421199
LinkDB
All DBs
Position
B9:19391338..19427710
Genome browser
AA seq
2606 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDCPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSSQALNVQIIAALIKPFGQCYEFLTLQTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHSDFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNATVENLRAICLDHAKL
GENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGCGSVQHVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALLPTAL
DALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVE
ETILEGHIGVTKELLAFQTPEKKFHIGCEKGGANLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNE
SNVDPRDEVFGYQHQFEDKPSLSKSEDRKEYNIGVLRQLQVIFGHLASSRLQYYVPRGFW
KQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP
HRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKK
LPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENEQEV
VQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDGD
VTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSE
LVKYITELTVTSKPHQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYL
NSPPGQDHLLPDAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNV
RYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSS
QSCDNLSLSEHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPAT
FMLVALDEGSGPPIKYQYAELGKLYTVVSQLIRCCDVTSRMQSSINGNPPLPNPYGDPNI
TAPIMPLQQLVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSP
PVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRNPSSTQQLLPG
EVTGQQQHTEPDEQEALDEQDTSPPEDTALYPHSPGTKFQPQNNLPLTQPYTGPAAQHVN
NPQRPGPRAQENWEPPEEVPPSQTKD
NT seq
7821 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgacggtcagggccaagctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaat
gaaaactcccctgtgagcccaccagatgaccagggtcagggggactgtcccacacccctg
gaggaggaggagccagctttcccccacactgaactggccaagctggatgacatgatcaac
agacctcgttgggtcgttccagttttaccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacgaaaatactgacagatgaggctgttagcggatgg
aaatttgagatccatcggtgcatcattaataacgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactcttggcgatggccaccaacccc
cactgtaagttccacatctacaatggtactcggccctctgagacggtgcctgctggggtt
cagctagcggaggatgagctttttgcccgtccacctgaccctcgttctcctaagggctgg
ttggtagacttaataaacaaatttggcacgttaaacgggtttcaaattctgcatgatcga
ttcatgagcagccaagctctgaatgttcagatcatcgccgcactcattaagccttttgga
cagtgctatgagtttctcactttgcaaacggtgaagaagtactttcttcccatcatagaa
atggttccccagtttctagaaaacctcaccgatgaggaattgaaaaaggaagcaaagaat
gaagccaaaaacgatgccctgtctatgataatcaaatctttaaagaacctggcttctcga
gtaccaggacaagaggaaacggtgaagaatttagagatatttaggttaaaaatgattcta
aggttattacagatttcttcttttaatggcaaaatgaatgcactaaatgaagtaaacaag
gtgatttcaagtgtttcctactacacgcatcgacatggcaatcctgaagaggaagagtgg
ctgacggcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacagtatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacgctccaggatctggacaacatctgggcagctcaggctggg
aaacatgaggctattgtcaagaatgttcatgatctccttgcaaagctggcctgggatttc
tcacctgaacagctggaccatctctttgactgcttcaaggagagctggactaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtgctcaatctgctgtggaatttggcccatagcgatgatgtt
cctgtggatatcatggaccaggcccttagcgctcatatcaaaattttggactatagctgc
tcccaggacagggacacacaaaagatgcagtggatagacagattcatagaagaattaaga
actaatgacaaatgggtgattcctgcattgaagcaaatacgagagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacgcagcgcagccctcatgtcttttatcgacatgacctaatcaaccagctgcag
cacaaccatgcactggtcactcttgtagcagagaacctgtctgcatacatggagaatatg
aggcagttctcgaaagagcattcagactttgatccccagacggttaggccaggaagtcgg
tatagtcatgttcaggaggtccaggagcggcttaatttcttgaggttcttactgaaagat
gggcaactctggctgtgcgcacctcaggctaagcagatctggaagtgcctggcggagaac
gcagtgttcttgtgcgatcgggaggcctgcttcaaatggtactccaaactcatgggcgac
gaacccgaccttgaccctgacatcaacaaggacttttttgagaacaacgtactgcagctt
gacccctcactgctgacagagaatgggatgaaatgctttgaacgattcttcaaggctgtc
aactgtagggagggcaaactggtggcaaaacgccgggcatacatgatggatgacctggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgacattgctagc
cgagcaattgacttgcttaaagagatttatacaaacctcggaccaaaattacaagccaat
caggtagagatccatgaggattttattcagtcttgctttgaccggctcaaagcctcctac
gatactctgtgtgtgctggacggagataaagacagcattaactgtgccagacaggaggcc
atccgcatggtcagagtgctgactgtgcttagagagtatataaccgagtgtgacagtgac
taccatgaggaaaggaccatcctgcccatgtccagggctttccgaggaaagcatatcacg
ctagttgtgcgtttcccaaaccaaggccgacaggttgatgatctggatatttggtcccat
accaacgacacaattggttctgtgcgacgctgcattctgaaccgcataaaggccaacagc
acccacaccaagattgagctgttcatagggggagagatcatagacccagcagatgacagg
aagctaatcgggcagctaaacctcaaagataaaactctcatcacagccaagctcacccag
gtcagcgccaatatgccttccagtccagacagctcctcagactcctcgactggctcgcct
gggaaccatggcaatcactacagtgatgggccaaaccctgaagtggagagctgtcttcct
ggcgtgataatgtccctgcacctgcgctacatctctttcctctggcaagttgcagacctg
ggctgtaatctcaacatgcctctcctgcgggatggagctcgtgttctaatgaagctcatg
cctccagataacgccacagtggaaaacctgcgagccatctgtctagatcacgccaaactc
ggcgagaacagccttagccccacattggattcacgtttctttggaccatcaccatcgcaa
gtgctttacttgatagaggtggtgtacgccttgctcatgcctgccagtggaacgttgggt
gaggatgcgagtgacttccagtacaacttcttgaagagtggtggcctgcccctggttttg
agcatgctcaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctcaacgcactaaaaatagccaaactgctgctcacagctgtaggctttggccatgta
aaggctgtggcagaggcctgccagcctgtggtggaggggactatccctgtgtcgcctatc
aaccagaccacacatgaccaggctctagtgttgcagaacgccttgcagaatatcccaaac
ccttcagccgagtgcatgctgcggaacgtggccattcgcctcgcccaacagatctcggat
gagaactttttccaggcctccaagtacatcccagatatctgtgtcattcgagcggttcag
aagatagtctgggcttctggctgcggctcggttcagcacgtcttcagttctaatgaggag
atcagcaagatctatgagaagaccaatgctggcaatgaacctgatgccgaagatgagcag
gtgtgctgtgaagctctggaggtcatgaccctgtgtttcgcccttttgcccactgcacta
gatgcacttagcaaagaaaaggcctggcaaaccttcattatagatctgctgctgcactgc
cagagcaagtctgttcgccaaatggcccaagaacagttcttcctcatggccacccggtgt
tgtatgggccataggcctctcctcttcttcatcaccctcctcttcacagttttaggtagc
actgcaaaagagcgggcaaagcatgctgctgattacttcactcttctaaggcacttactc
aactatgcatataacagcaacattaatcttcctaatgcagaagttctcttaaacaatgag
atcgactggttgaagcgcatccgggatgaagtgaagaggactggagagcctggggttgag
gagaccattttggaaggtcatattggtgtcacaaaagagctactagctttccagacacca
gagaagaagttccacattggctgtgaaaaaggaggtgctaatcttatcaaggagttaatg
gatgacttcctgttcccagcatctaacgtgtacttgcaatacatgaagagtggagaattc
cccactgagcaggccatacctgtgtgtagcaccccagccaccatcaatgcaggctttgaa
ctgctggttgcacttgctgtcggatgtgtgcgaaatctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttaccaccagtt
ggaccaaggcccaccaaggggtttgtgggtctgaaaaatgcaggtgcgacttgctacatg
aactcggtgatccagcagctctacatgattcctcccatcaggaatggcattctggccatc
gaaggcacgggcagcgatgtggatgatgatatgtctggagacgagaagcaagataatgag
agtaatgtggatccccgggatgaagtgtttggctatcaacaccagtttgaagacaaacct
tctctcagtaaatcggaagacaggaaggaatacaacattggggttcttcggcagttgcag
gtcatttttggacacttggcttcctccaggttgcaatactatgtgcctaggggattctgg
aagcaatttcggttgtggggtgaaccggtcaatctgagggagcagcatgatgccctggag
ttctttaactcgctagtagacagtttagacgaggctttgaaagcattgggtcaccctgcc
atgctgagcaaagtgctgggtggctcttttgctgaccagaaaatatgtcagggctgtcct
cacagatatgaatgtgaggaatcgtttacgacgttgaatgtagatatcagaaaccatcaa
aatctcctcgattctatggagcagtatgtgaaaggagacttactcgagggtgcaaatgcc
taccactgtgaaaaatgcaacaagaaggttgacacagtgaagcgtttactcattaaaaag
cttcctccggtgctggccatccagctaaaacgctttgattatgactgggaacgagagtgt
gccatcaagttcaacgattactttgagttcccacgggagttagacatggagccttatacg
gtagctggagtagccaagctggaggggtctgatgtgcacccagagaatgagcaggaggtg
gtccagcagaatgagccgtcagagccggaacccccctgcagctctcgctatcgtttggtg
ggagtgctggtccactcaggccaggctagtggaggtcattattactcctacatcattcag
aggaacggcagtggtggtgagggagaaaggaaccgttggtataagtttgatgatggagac
gtcactgagtgcaagatggacgatgacgaggagatgaagaaccagtgctttggtggagag
tacatgggtgaggtcttcgaccacatgatgaaacgcatgtcctacaggcgacagaagcgc
tggtggaatgcctacatcctcttctatgagcgtatggacacgttggacaaggacagtgag
ctggttaaatacattactgagctcacagtgaccagcaaacctcaccaggtgaagatgccc
tctgctattgaacgcagcgtacgcaaacaaaatgtgcagttcatgcacaaccgtatgcag
tacagcttggagtacttccagttcatcaggaaactgctgacctgtaacagtgtctacttg
aactcccctccaggtcaagaccatcttttgcctgatgcagaagaaatggccatgattagt
atacagctggctgctagatttctcttcagtactggattccacaccaagaaaattgtccgt
ggccctgctagtgattggtatgatgctctgtgcatcttgctacggcacagtaagaatgtg
cgttactggtttgcacacaacgtcctctttgcatatccgaaccgcttctcagagtacctg
cttgagtgtcccagtgcagaggtccgaggagccttctccaaactcattgtattcattgca
catttctcactgcaagatggaccctgcccttcacccattgcttcacctggaccttcaagt
cagagctgtgataatttgagtttaagtgagcacttgttccgtgctgtacttaatctgctg
agaagggaagtctctgagcatggacgtcacctgcagcagtacttcaatcttttcgtcatg
tatgccaaccttggcttggcagagaagacgcagcttttgaagcttggggtaccagctacc
ttcatgcttgtggctctggatgagggctctggccctcccattaaataccagtatgctgag
cttggaaagctttatactgtcgtctcacagctgattcgttgctgtgatgtgacttcacgt
atgcagtcctcaatcaatggaaaccctcccctgccaaacccatatggtgaccccaacatc
accgctcccatcatgcctctgcagcagctggtggtggacatcctgtttgtgcgcaccagt
tatgtgaagaagattatcgaggactgcagtaactccgaggacactatcaaactgctgaga
ttctgctgttgggaaaaccctcagttttcctccactgtgttgagtgaactactgtggcag
gtggcgtattcatacacgtatgagttaaggccttacctggacttgctccttcaaatcttg
tttattgaggactcatggcagactcaccggatccacaatgtgctgaagggaatccctgat
gaccgtgatgggctttttgacaccattcagcgctccaaaaatcactaccaaaagagagct
tatcagtgcatcaaatgcatggtggctcttttcagcaactgttcagtggcctaccaaatt
ctccagagtaatggagatttaaaaaggaagtggacctgggcagtggagtggcttggtgac
gagctggaacggagaccgtacactggcaatactcagtacacgtataacaactggtcccct
cctgtccagagtaatgagacttctaatggatacttcctggagcgctcccacagtgcccgt
atgactttggccaaggcctgtgagttgtgtccagaagagtgtcacttaacgaagcacgag
gtggtatctgaagaggacgctggccggaacccgtcctcgacacagcaacttttgccaggg
gaagtgacaggccaacaacagcacaccgagcctgatgagcaggaggccctcgatgagcag
gacacttctcctccagaggacactgctctgtaccctcactctccaggcacaaagtttcaa
ccgcagaataacctcccgcttacacagccgtacactggccctgcagcacagcacgtcaac
aaccctcagcgtccaggcccacgagcacaagagaactgggagccccctgaggaggtgccg
cccagccagactaaagactaa
DBGET
integrated database retrieval system
