Carassius gibelio (silver crucian carp): 127965009
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Entry
127965009 CDS
T08819
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127965009 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127965009 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127965009 (si:ch211-269e2.1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
AAA_lid_5
WipA_N
Motif
Other DBs
NCBI-GeneID:
127965009
NCBI-ProteinID:
XP_052421488
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Position
B9:20100246..20119148
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AA seq
1184 aa
AA seq
DB search
MIAEPTLLSRSVQKENSVVDVSSCASVHHVSSERNENRQKTVRGKRKARECSENAKRRHS
KSSNGSLGRAENEQLKNGDVEAVTLFEVVSMGRNAMQAVVDDWIDAYTGDRDSALLDLIS
FFIQCSGCKGMVTAEMFQSKKGADVMSKMVEDLDEDTGLQYKKFLAFPWILTVTWPLDMD
SGEYPLIMSGLYWKRFRSHFCEFVSVLVAQCQNCVIFDGYLLNTLISLLTELSDSRVRAF
RHTCTLAAVKLLSALINVALNLSISVDNSQRLYEVELAKMASKRASPRLDRIQRKISELQ
DRKCEIENMMDAIFKGVFLKRYRDVIPEIRAICMEELTVWMKLYSSVFLNDSYLKYVGWM
MHDKQPDVRLKCVLGLQALYQDQSSSKMDLFTIRFKERMISMTLDKDHEVAIQAMRLLMV
ISQSCEDVLGPDDHKNVFQFVYCSHRPLATTAGEFLYNRLVSNHELSKPRDGASDQERHR
ELLLARVQSLINFHTENELHQHVLYLVDSLWDSAAALLKDWTGLTSLLLPHTSCQEQATA
LSSAEEAFVIELISASVRQAAEGPPFSGRGAGKKVVNTKEKKIQIDDCTKLTEHFVKVLP
ELLSKYSEDAEKLSSLLKIPQYFQTDACDHENSQCVLALLAQLEAAVDRHTDVGLLEAAA
RSYQSLCAQDLPWHSLARPSFDRLIQHWTDTLGTRLRESLCDGCFTGNEDSTLEILSTLK
KLNAFIVAQDLSKWSPYELGTRLLDVEIKHSGLPMEVTIEALRCMCSCILWKLNTFGEGL
TSRESALQQRSQLRAFCEKCHRCLSHAEQLVREQAFMCLSDVLIAHNYQLQMWDSSAGTP
LLYTPDPKLQKALLSFVVEHVFTSPEQDTHSSKAVSLSVSVCAVSESECGDGRLEDLHRR
RNLLAAYCKLIVHSVLEMSMAAELFKQYVKFYNDFGDIIKETLNRTRQMDKMESARTLVQ
CLQQLYLRLKQEQDRGNTCSSRVQTYSSIKELARRFSLTFGWDQIKSRESLAMIHRDGIE
FVFKGFVQQSEKHSPPYISYLTILSEFSSKLLKPDKKTIYSYLQKFAGEQVINNREESWM
PLIYYRASLMGTAEGEDAISFISSDTNKQPSLSNRSRSQVNSEGDQRFLSLSSEPKGNEL
LKSSEDSKVQQAPLSREQLTSSLASDKVLRSSEEVDVDTVDIDG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggagccaactttattgtccagatcggtgcaaaaagagaactcagtagttgac
gtctcttcctgtgcatcggtgcatcacgtttcaagtgagagaaatgaaaacagacagaag
actgtgagaggaaagaggaaagcccgggaatgctctgagaatgccaaaagaaggcattca
aagagcagtaatggcagcctgggcagagcagagaacgaacagctcaaaaatggagacgtg
gaagccgtcacactgtttgaggtggtcagcatggggaggaacgcaatgcaggctgtggtg
gatgactggatcgacgcttatactggtgacagagactcagcactgctagatctcatcagc
ttctttatccagtgttcaggatgcaaagggatggttacagcagagatgtttcagagcaaa
aagggtgctgatgtcatgagtaaaatggtggaggatttggatgaggacacaggtttacaa
tataagaagttccttgcatttccatggattttaactgtcacgtggccacttgacatggac
agtggcgagtatcctctcatcatgtcaggcctgtactggaagaggtttcgttcacacttc
tgtgaatttgtatcggtgctagtggcccagtgtcagaactgtgtaatcttcgatggctac
ctcttgaacacactcatttcactactgacagagctctccgattccagagttcgcgcattc
aggcacacctgtacactagcagcagtgaagctgctcagtgctttgataaatgtggctctc
aaccttagtatcagtgtcgataacagtcagcggctgtacgaggtcgagctggccaagatg
gccagcaaacgggcttctccgaggctggacagaatccagaggaagatcagtgagttacag
gacaggaaatgtgaaattgagaacatgatggatgccattttcaaaggagtcttcctgaag
agatacagagacgtgattcctgaaatccgggccatctgcatggaggaactgacagtgtgg
atgaagctgtatagttcagtgtttctaaacgacagctatctgaagtacgtgggatggatg
atgcatgacaagcaacctgatgtgcgtctgaaatgtgtgctgggtctacaggccctttat
caggatcaaagtagttctaaaatggaccttttcacgatacggtttaaggagaggatgatc
tccatgactctggataaagaccatgaagtggccatacaggccatgagattgctcatggtc
atctctcaatcctgtgaggatgttctgggtcctgatgaccacaagaatgtcttccagttt
gtgtactgctcccacagacctctagctaccactgcgggtgaattcctctataacaggctg
gtcagtaaccatgaattatcaaagcccagagatggagcctctgatcaggagaggcacaga
gagttactcttagctagagtccaatccctgatcaacttccacactgagaatgagctgcac
cagcatgtgttgtacctcgtggatagtctgtgggacagtgcagcggctctactgaaggac
tggaccggtcttacctcactgctcttacctcacacgtcctgtcaggaacaagctacagct
ctgagcagtgctgaggaggccttcgtgattgagctcatttcggcgtcagtgaggcaggct
gcagaggggcctccgttttcagggagaggagcaggtaaaaaggtcgtaaatactaaagag
aaaaagatacaaattgatgactgcacaaaactcactgaacacttcgttaaagtgctgccc
gagctgttatccaagtactcagaggatgcggaaaaactcagctcccttctaaaaatacct
cagtatttccaaacggacgcctgtgatcatgaaaactcacagtgcgtgctggcattgctg
gctcagctggaggctgcggtggacagacacacagatgttggactgctggaggcggctgct
cgttcttaccagagcctctgtgctcaggacttgccctggcactctctggcccggcccagc
tttgaccggctcatccagcactggacagacacactgggaacacggttaagagaatcactg
tgtgacggttgtttcactggaaacgaggacagcactttggaaattctgtccacactgaag
aaacttaatgcgttcattgttgctcaggatctgtctaaatggagcccatatgagctgggg
accagactcctggatgtggagataaaacatagtggtcttcccatggaggtgacaatcgag
gctctgcgctgcatgtgtagctgcatcctttggaagctcaacacctttggagaaggattg
acctccagggagtccgccctccagcagagaagccagctacgtgccttctgtgagaaatgt
caccgctgtctctcgcacgctgagcagcttgtacgagagcaagccttcatgtgtctgagt
gatgttctcatagctcataattaccagcttcagatgtgggactcgtctgcaggcactccg
ttgctgtacacccctgatcccaaactccagaaagctcttctttccttcgtcgtggagcat
gtcttcaccagccccgagcaggacacccacagtagtaaagctgtctctctctcggtgtct
gtgtgcgcagtcagtgagagtgagtgtggagacggacggctggaagacttgcaccggcgg
aggaatcttctggcggcgtactgcaagctgatagtgcacagtgtgctagagatgagcatg
gctgcggagcttttcaagcagtatgtgaagttctacaatgacttcggcgacatcatcaaa
gagaccctgaacaggacacggcagatggacaagatggaaagcgcgcgcacgctggtgcag
tgccttcagcagctgtatctgaggctgaaacaggagcaggacagaggaaacacctgcagc
tccagggtccagacctacagcagcatcaaggagcttgccagacgcttctcactcaccttc
ggatgggaccagatcaaatcccgcgagtccctggccatgatccacagggacggcattgag
tttgttttcaaaggcttcgttcagcagtctgagaaacactctccaccgtacatctcatac
ctcaccatcctcagcgaattctccagcaaactgctcaaaccggacaagaagactatctac
agttatttgcagaagtttgctggtgagcaggtcatcaacaacagagaggagagctggatg
ccgctgatttactacagagcgtctctgatgggcacggctgagggagaagatgccatctcc
ttcatcagctcggacaccaacaaacagccctcgctcagcaaccgctccagatcacaagtc
aactctgagggggaccaaaggtttctttcgctctcttcagaaccaaagggaaacgagctt
ctgaaaagttctgaagactcgaaagtccaacaagccccactgagcagagagcagctgacc
agcagtctggcgtctgataaagttctacggagcagtgaggaagttgacgtggatactgta
gatattgatggctga
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